Gene Symbol | Chst9 |
Entrez Gene ID | 71367 |
Full Name | carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 9 |
Synonyms | 5430438D01Rik |
General protein information |
|
Gene Type | protein-coding |
Organism | Mus musculus(house mouse) |
Genome |
ORF » Species Summary » Mus musculus » Chst9 cDNA ORF clone
gRNAs
Gene Symbol | Chst9 |
Entrez Gene ID | 71367 |
Full Name | carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 9 |
Synonyms | 5430438D01Rik |
General protein information |
|
Gene Type | protein-coding |
Organism | Mus musculus(house mouse) |
Genome |
mRNA | Protein | Name |
---|---|---|
XM_017317992.2 | XP_017173481.1 | carbohydrate sulfotransferase 9 isoform X1 |
NM_199055.2 | NP_951010.1 | carbohydrate sulfotransferase 9 |
NM_001364992.1 | NP_001351921.1 | carbohydrate sulfotransferase 9 isoform 2 |
XM_017317992.1 | XP_017173481.1 | carbohydrate sulfotransferase 9 isoform X1 |
NM_199055.3 | NP_951010.1 | carbohydrate sulfotransferase 9 isoform 1 |
Pan troglodytes (chimpanzee) | CHST9 | XP_001158505.1 |
CHST9 | XP_001097609.1 | |
Canis lupus familiaris (dog) | CHST9 | XP_003434971.1 |
Homo sapiens (human) | CHST9 | NP_113610.2 |
Bos taurus (cattle) | CHST9 | NP_001069347.1 |
Mus musculus (house mouse) | Chst9 | NP_951010.1 |
Gallus gallus (chicken) | CHST9 | XP_004939870.1 |
Rattus norvegicus (Norway rat) | Chst9 | NP_001163941.1 |
Mouse N-acetylgalactosamine 4-sulfotransferases-1 and -2. Molecular cloning, expression, chromosomal mapping and detection of their activity with GalNAcbeta1-4GlcNAcbeta1-octyl.
Okuda T, Sawada T, Nakano H, Matsubara K, Matsuda Y, Fukuta M, Habuchi O
Journal of biochemistry134(1)111-20(2003 Jul)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following Chst9 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the Chst9 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OMu08665 | |
Clone ID Related Accession (Same CDS sequence) | NM_199055.2 , NM_199055.3 | |
Accession Version | NM_199055.2 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1242bp) Protein sequence SNP |
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Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2017-05-27 | |
Organism | Mus musculus(house mouse) | |
Product | carbohydrate sulfotransferase 9 | |
Comment | Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from AC157900.3 and AC102397.7. On Nov 17, 2006 this sequence version replaced NM_199055.1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments. ##Evidence-Data-START## Transcript exon combination :: AB106879.1, BC107361.1 [ECO:0000332] RNAseq introns :: mixed/partial sample support SAMN00849385, SAMN01164131 [ECO:0000350] ##Evidence-Data-END## |
1 | ATGAAAGCCA AACAAGTCTT CTTTTCTGTC CTGCTGTTTG GGACAGCAGG GCTTCTGCTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_951010.1 |
CDS | 40..1281 |
Translation |
Target ORF information:
Target ORF information:
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1 | ATGAAAGCCA AACAAGTCTT CTTTTCTGTC CTGCTGTTTG GGACAGCAGG GCTTCTGCTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu08665 | |
Clone ID Related Accession (Same CDS sequence) | NM_199055.2 , NM_199055.3 | |
Accession Version | NM_199055.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1242bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-06-07 | |
Organism | Mus musculus(house mouse) | |
Product | carbohydrate sulfotransferase 9 isoform 1 | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AC102416.5, AC157900.3 and AC102397.7. On Jul 20, 2018 this sequence version replaced NM_199055.2. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments. ##Evidence-Data-START## CDS exon combination :: AB106879.1, BC107361.1 [ECO:0000331] RNAseq introns :: mixed/partial sample support SAMN00849385, SAMN01164131 [ECO:0000350] ##Evidence-Data-END## ##RefSeq-Attributes-START## inferred exon combination :: based on alignments, homology ##RefSeq-Attributes-END## |
1 | ATGAAAGCCA AACAAGTCTT CTTTTCTGTC CTGCTGTTTG GGACAGCAGG GCTTCTGCTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_951010.1 |
CDS | 296..1537 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGAAAGCCA AACAAGTCTT CTTTTCTGTC CTGCTGTTTG GGACAGCAGG GCTTCTGCTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu70699 | |
Clone ID Related Accession (Same CDS sequence) | NM_001364992.1 | |
Accession Version | NM_001364992.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1104bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-06-07 | |
Organism | Mus musculus(house mouse) | |
Product | carbohydrate sulfotransferase 9 isoform 2 | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AK017407.1 and AC102397.7. Sequence Note: This RefSeq record was created from transcript and genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments. ##Evidence-Data-START## Transcript exon combination :: AK017407.1, BY717224.1 [ECO:0000332] RNAseq introns :: mixed/partial sample support SAMN00849385, SAMN01164131 [ECO:0000350] ##Evidence-Data-END## |
1 | ATGACTACGG GAAAAATCCA GAAACAGATC ACGAATCAGA ACTCTGAGGT TCACATGCCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001351921.1 |
CDS | 492..1595 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGACTACGG GAAAAATCCA GAAACAGATC ACGAATCAGA ACTCTGAGGT TCACATGCCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu79848 | |
Clone ID Related Accession (Same CDS sequence) | XM_017317992.2 , XM_017317992.1 | |
Accession Version | XM_017317992.1 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1050bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-06-21 | |
Organism | Mus musculus(house mouse) | |
Product | carbohydrate sulfotransferase 9 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000084.6) annotated using gene prediction method: Gnomon, supported by mRNA evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Mus musculus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGCCTGAAG ATCTGAAGAA GAAAGGGGGA GATCTGCTCA ACCTAGGGAG TCCAACAAGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_017173481.1 |
CDS | 699..1748 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGCCTGAAG ATCTGAAGAA GAAAGGGGGA GATCTGCTCA ACCTAGGGAG TCCAACAAGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu79848 | |
Clone ID Related Accession (Same CDS sequence) | XM_017317992.2 , XM_017317992.1 | |
Accession Version | XM_017317992.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1050bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-08-07 | |
Organism | Mus musculus(house mouse) | |
Product | carbohydrate sulfotransferase 9 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000084.6) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Aug 8, 2019 this sequence version replaced XM_017317992.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Mus musculus Annotation Release 108 Annotation Version :: 108 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGCCTGAAG ATCTGAAGAA GAAAGGGGGA GATCTGCTCA ACCTAGGGAG TCCAACAAGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_017173481.1 |
CDS | 136..1185 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGCCTGAAG ATCTGAAGAA GAAAGGGGGA GATCTGCTCA ACCTAGGGAG TCCAACAAGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Mouse N-acetylgalactosamine 4-sulfotransferases-1 and -2. Molecular cloning, expression, chromosomal mapping and detection of their activity with GalNAcbeta1-4GlcNAcbeta1-octyl. |