Gene Symbol | Synpr |
Entrez Gene ID | 72003 |
Full Name | synaptoporin |
Synonyms | 1500003F20Rik,SPO |
General protein information |
|
Gene Type | protein-coding |
Organism | Mus musculus(house mouse) |
Genome |
ORF » Species Summary » Mus musculus » Synpr cDNA ORF clone
Gene Symbol | Synpr |
Entrez Gene ID | 72003 |
Full Name | synaptoporin |
Synonyms | 1500003F20Rik,SPO |
General protein information |
|
Gene Type | protein-coding |
Organism | Mus musculus(house mouse) |
Genome |
mRNA | Protein | Name |
---|---|---|
NM_028052.4 | NP_082328.3 | synaptoporin isoform 1 |
NM_001163032.1 | NP_001156504.1 | synaptoporin isoform 2 precursor |
Canis lupus familiaris (dog) | SYNPR | XP_003432857.1 |
Mus musculus (house mouse) | Synpr | NP_082328.3 |
Homo sapiens (human) | SYNPR | NP_001123475.1 |
SYNPR | XP_001093248.2 | |
Gallus gallus (chicken) | SYNPR | NP_990725.1 |
Pan troglodytes (chimpanzee) | SYNPR | XP_001174562.1 |
Rattus norvegicus (Norway rat) | Synpr | NP_076464.1 |
Danio rerio (zebrafish) | LOC558290 | XP_686583.4 |
Bos taurus (cattle) | SYNPR | NP_001039971.1 |
Xenopus tropicalis (tropical clawed frog) | synpr | NP_001072689.1 |
New functions of Semaphorin 3E and its receptor PlexinD1 during developing and adult hippocampal formation.
Mata A, Gil V, P?rez-Clausell J, Dasilva M, Gonz?lez-Calixto MC, Soriano E, Garc?a-Verdugo JM, Sanchez-Vives MV, Del R?o JA
Scientific reports8(1)1381(2018 Jan)
Genome-wide Analysis of RAR? Transcriptional Targets in Mouse Striatum Links Retinoic Acid Signaling with Huntington's Disease and Other Neurodegenerative Disorders.
Niewiadomska-Cimicka A, Krzy?osiak A, Ye T, Podle?ny-Drabiniok A, Demb?l? D, Doll? P, Kr??el W
Molecular neurobiology54(5)3859-3878(2017 Jul)
A high-resolution spatiotemporal atlas of gene expression of the developing mouse brain.
Thompson CL, Ng L, Menon V, Martinez S, Lee CK, Glattfelder K, Sunkin SM, Henry A, Lau C, Dang C, Garcia-Lopez R, Martinez-Ferre A, Pombero A, Rubenstein JLR, Wakeman WB, Hohmann J, Dee N, Sodt AJ, Young R, Smith K, Nguyen TN, Kidney J, Kuan L, Jeromin A, Kaykas A, Miller J, Page D, Orta G, Bernard A, Riley Z, Smith S, Wohnoutka P, Hawrylycz MJ, Puelles L, Jones AR
Neuron83(2)309-323(2014 Jul)
The intracellular redox protein MICAL-1 regulates the development of hippocampal mossy fibre connections.
Van Battum EY, Gunput RA, Lemstra S, Groen EJ, Yu KL, Adolfs Y, Zhou Y, Hoogenraad CC, Yoshida Y, Schachner M, Akhmanova A, Pasterkamp RJ
Nature communications54317(2014 Jul)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following Synpr gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the Synpr cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OMu16043 | |
Clone ID Related Accession (Same CDS sequence) | NM_001163032.1 | |
Accession Version | NM_001163032.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 798bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-09-16 | |
Organism | Mus musculus(house mouse) | |
Product | synaptoporin isoform 2 precursor | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from CD354682.1, AK032442.1, AK049661.1 and AC132330.5. Transcript Variant: This variant (2) differs in the 5' UTR, lacks a portion of the 5' coding region, and initiates translation at an alternate start codon, compared to variant 1. The encoded isoform (2) has a distinct N-terminus and is shorter than isoform 1. ##Evidence-Data-START## Transcript exon combination :: SRR1660811.94226.1, SRR1660821.165906.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN00849383, SAMN01164131 [ECO:0000348] ##Evidence-Data-END## |
1 | ATGTGTATGG TGATATTTGC TCCGCTTTTT GCAATGTTTG CATTTGCAAC ATGTGGTGGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001156504.1 |
CDS | 372..1169 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001163032.1 |
1 | ATGTGTATGG TGATATTTGC TCCGCTTTTT GCAATGTTTG CATTTGCAAC ATGTGGTGGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu13704 | |
Clone ID Related Accession (Same CDS sequence) | NM_028052.4 | |
Accession Version | NM_028052.4 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 858bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-09-16 | |
Organism | Mus musculus(house mouse) | |
Product | synaptoporin isoform 1 | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AK078223.1, AK005132.1, AK049661.1 and AC132330.5. On Jul 9, 2009 this sequence version replaced NM_028052.3. Transcript Variant: This variant (1) represents the shorter transcript and encodes the longer isoform (1). ##Evidence-Data-START## Transcript exon combination :: AK078223.1, SRR1660815.29451.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN00849379, SAMN00849381 [ECO:0000348] ##Evidence-Data-END## |
1 | ATGGACCCTG TGAGCCAGGT GGCCTCTGCG GGCACCTTTC GGGCATTGAA GGAACCCCTT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_082328.3 |
CDS | 206..1063 |
Translation |
Target ORF information:
Target ORF information:
|
NM_028052.4 |
1 | ATGGACCCTG TGAGCCAGGT GGCCTCTGCG GGCACCTTTC GGGCATTGAA GGAACCCCTT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
New functions of Semaphorin 3E and its receptor PlexinD1 during developing and adult hippocampal formation. |
Genome-wide Analysis of RAR? Transcriptional Targets in Mouse Striatum Links Retinoic Acid Signaling with Huntington's Disease and Other Neurodegenerative Disorders. |
A high-resolution spatiotemporal atlas of gene expression of the developing mouse brain. |
The intracellular redox protein MICAL-1 regulates the development of hippocampal mossy fibre connections. |