Gene Symbol | Borcs8 |
Entrez Gene ID | 72368 |
Full Name | BLOC-1 related complex subunit 8 |
Synonyms | 2310045N01Rik,Mef2bnb |
General protein information |
|
Gene Type | protein-coding |
Organism | Mus musculus(house mouse) |
Genome |
ORF » Species Summary » Mus musculus » Borcs8 cDNA ORF clone
Gene Symbol | Borcs8 |
Entrez Gene ID | 72368 |
Full Name | BLOC-1 related complex subunit 8 |
Synonyms | 2310045N01Rik,Mef2bnb |
General protein information |
|
Gene Type | protein-coding |
Organism | Mus musculus(house mouse) |
Genome |
mRNA | Protein | Name |
---|---|---|
NM_001309645.1 | NP_001296574.1 | BLOC-1-related complex subunit 8 isoform 2 |
NM_001145552.2 | NP_001139024.1 | BLOC-1-related complex subunit 8 isoform 1 |
NM_001309841.1 | NP_001296770.1 | BLOC-1-related complex subunit 8 isoform 3 |
Pan troglodytes (chimpanzee) | MEF2BNB | NP_001184112.1 |
Mus musculus (house mouse) | 2310045N01Rik | NP_001139024.1 |
Homo sapiens (human) | MEF2BNB | NP_001139256.1 |
Bos taurus (cattle) | MEF2BNB | NP_001139264.1 |
Gallus gallus (chicken) | MEF2BNB | NP_001243435.1 |
Danio rerio (zebrafish) | mef2bnb | NP_001091717.1 |
Drosophila melanogaster (fruit fly) | CG32590 | NP_727796.1 |
Anopheles gambiae (African malaria mosquito) | AgaP_AGAP008600 | XP_314699.4 |
Xenopus tropicalis (tropical clawed frog) | mef2bnb | XP_002936374.1 |
Canis lupus familiaris (dog) | MEF2BNB | XP_005632718.1 |
Rattus norvegicus (Norway rat) | Mef2bnb | NP_001139198.1 |
Assembly, verification, and initial annotation of the NIA mouse 7.4K cDNA clone set.
VanBuren V, Piao Y, Dudekula DB, Qian Y, Carter MG, Martin PR, Stagg CA, Bassey UC, Aiba K, Hamatani T, Kargul GJ, Luo AG, Kelso J, Hide W, Ko MS
Genome research12(12)1999-2003(2002 Dec)
The MEF2B homologue differentially expressed in mouse embryonal carcinoma cells.
Hidaka K, Morisaki T, Byun SH, Hashido K, Toyama K, Mukai T
Biochemical and biophysical research communications213(2)555-60(1995 Aug)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following Borcs8 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the Borcs8 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OMu06892 | |
Clone ID Related Accession (Same CDS sequence) | NM_001145552.2 | |
Accession Version | NM_001145552.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 363bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-12-28 | |
Organism | Mus musculus(house mouse) | |
Product | BLOC-1-related complex subunit 8 isoform 1 | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from BE626539.1, AK009829.1, AC124327.9, CX218046.1, AI627072.1, AI153493.1, BE623475.1 and AI480554.1. On Jun 11, 2015 this sequence version replaced NM_001145552.1. Transcript Variant: This variant (1) encodes the longest isoform (1). Sequence Note: This RefSeq record was created from transcript and genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments. ##Evidence-Data-START## Transcript exon combination :: SRR1660817.106732.1, CX564799.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN00849374, SAMN00849375 [ECO:0000348] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. |
1 | ATGGAAGAAC CTGAGATGCA GCTGAAGGGA AAGAAAGTCA CAGACAAGTT CACCGAGAGT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001139024.1 |
CDS | 238..600 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001145552.2 |
1 | ATGGAAGAAC CTGAGATGCA GCTGAAGGGA AAGAAAGTCA CAGACAAGTT CACCGAGAGT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu70899 | |
Clone ID Related Accession (Same CDS sequence) | NM_001309645.1 | |
Accession Version | NM_001309645.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 330bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-08-01 | |
Organism | Mus musculus(house mouse) | |
Product | BLOC-1-related complex subunit 8 isoform 2 | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from BE626539.1, AA270613.1, BB748920.1, BQ556387.1 and BE984996.1. Transcript Variant: This variant (2) lacks two exons and its 3' terminal exon extends past a splice site that is used in variant 1. This results in a novel 3' coding region and 3' UTR, compared to variant 1. It encodes isoform 2 which is shorter and has a distinct C-terminus, compared to isoform 1. ##Evidence-Data-START## Transcript exon combination :: BG962869.1, CK794793.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN00849374, SAMN00849375 [ECO:0000348] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. |
1 | ATGGAAGAAC CTGAGATGCA GCTGAAGGGA AAGAAAGTCA CAGACAAGTT CACCGAGAGT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001296574.1 |
CDS | 238..567 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001309645.1 |
1 | ATGGAAGAAC CTGAGATGCA GCTGAAGGGA AAGAAAGTCA CAGACAAGTT CACCGAGAGT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu70900 | |
Clone ID Related Accession (Same CDS sequence) | NM_001309841.1 | |
Accession Version | NM_001309841.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 342bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-08-02 | |
Organism | Mus musculus(house mouse) | |
Product | BLOC-1-related complex subunit 8 isoform 3 | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from CX218046.1, AK009829.1, AC124327.9, AI627072.1, AI153493.1, BE623475.1 and AI480554.1. Transcript Variant: This variant (3) contains an alternate 5'-terminal exon, differs in the 5' UTR, lacks a portion of the 5' coding region, and initiates translation at an alternate start codon, compared to variant 1. The encoded isoform (3) has a distinct N-terminus and is shorter than isoform 1. Sequence Note: This RefSeq record was created from transcript and genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments. ##Evidence-Data-START## Transcript exon combination :: CX218046.1 [ECO:0000332] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. |
1 | ATGGGAGCCC TGCGTGTCAC AGACAAGTTC ACCGAGAGTG TCTATGTCCT TGCCAACGAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001296770.1 |
CDS | 65..406 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001309841.1 |
1 | ATGGGAGCCC TGCGTGTCAC AGACAAGTTC ACCGAGAGTG TCTATGTCCT TGCCAACGAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Assembly, verification, and initial annotation of the NIA mouse 7.4K cDNA clone set. |
The MEF2B homologue differentially expressed in mouse embryonal carcinoma cells. |