Related articles in PubMed
The genome of Nectria haematococca: contribution of supernumerary chromosomes to gene expansion.
Coleman JJ, Rounsley SD, Rodriguez-Carres M, Kuo A, Wasmann CC, Grimwood J, Schmutz J, Taga M, White GJ, Zhou S, Schwartz DC, Freitag M, Ma LJ, Danchin EG, Henrissat B, Coutinho PM, Nelson DR, Straney D, Napoli CA, Barker BM, Gribskov M, Rep M, Kroken S, Moln?r I, Rensing C, Kennell JC, Zamora J, Farman ML, Selker EU, Salamov A, Shapiro H, Pangilinan J, Lindquist E, Lamers C, Grigoriev IV, Geiser DM, Covert SF, Temporini E, Vanetten HD
PLoS genetics5(8)e1000618(2009 Aug)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following CHR2112 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the CHR2112 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021 1081 1141 1201 1261 1321 1381 1441 1501 1561 1621 1681 1741 1801 1861 1921 1981 2041 2101 2161 2221 2281 2341 2401 2461 2521 2581 2641 2701 2761 2821
| ATGGATATTC AGCCTCACAA CGCTCAGAGC CTGACCCGAC CTGACCACCT CACATCATCC ATTCAAGCTC CAGGGAACAA AGCCAACGGC CCTGACCCAT CATACGAAGC GAACTCAGAC GCAATAGTCT TTCACCTGAC CTTGACCGCG GGCCATCAGG CGGGCTATGA ATCCTCTACA GCACCCACCG CAGCCCAACA GAGCTACTCT GGTTCAGTAG CTCAATGGGT ATCCGCAACA CCGCAACCAG ATGTCTGGCC AACCGGGAAC CTCAACTCGA CCCTGCCGTC TCCCTCTGAC AACCAATGGA ACCCATACCA CAGTTTTCCG TCCCAAAGCG GAGCAGGAAT TTTATTCCAA GGCAATCCCT ACCCAATAGT GGCTAATAAC TCACAGCCGC CATCAACAGC TTTCACCTCA TGGTCATCCG TCCCCCTGCG ATATCCAATG CCGCAAGAAC CTGCTCAAAA CTATCCACTG ATATTTCCTA CATCTTTTTG CCCCCAATAT CCCATGAATA CCACTCAGAT TCCTTTGAGT CTCCAGCCAT GGCAAAGCGC AGTCTGCGTG GAAGCTCAGC TGAATGTCGA CACCATGACA GTCCCGAATC ACAGTCCTCC CACTGCACTC GCACCAGCCC AACAGGCCCC CGAAGAAGAA GGGCCAGAAA TGGTGTGTTT TGGCATGATA CAGAGCTCGA CAGAGTTCAA CTCAAGTGAC TGCCCGGAGA TCTCTGGCCA CATACTATCA GAACATGGCC AAATGGTCCA AGGCCTTCTC GATGAGGAGA CCCTAGACCT CTACGTCTCT TGCACCACCC CAGACTCTCA AGGCTCCGCG CAGCAAAAGA CGCGTTCCAC TCCTCTTCAA TGTACATTGG AGATTACCGT TTATGGTCCC TCGGATCTTT TTGAGGAAAT TGGGACGTGG CACCAGAAGC AGGCTCTCAC ATTCATGTTA CGCCGGGAAC AGGGTTGGGC TTTCTACGAC AAGCGGCCAG ATGTTTGGGA GATGATAGAC ACCGACCAAG GGCGAACCTT CCTCAACCGA ATCTCCAATG CCTATCAACC TGAAGAGCCC CCTCAGTGCT ATGGGGGTAT CATCGCAGAT CCTATGGGAC TTGGCAAGAC TCTCACCATG ATTGCCCTAG CAGCAACCGA TTTGGATGGA AACAACACCG ACATGGACAC AACCGAAGAA TGCCAGCCCA GCGTCTCGGC AACCCTCATT GTCGTTCCAC CTCCACTAAT CGGGACATGG GAAGAGCAAC TATCTGAGTG GGTATCTACG CACGTCATTA ACGGCGGCAT GGCATGGCAC CGCCATCACC GAGAAACTCG CCTCAGCTCC ACAGACAGCC TTGACCACTT GAACATTGTC TTGACAACAT ATCACACAGT CTCTGCAGAG TGGAATAGTG GAAATGGTGT ACCAAACGCA GCTCTCTTTT CAGTGCGATG GGAAAGAATC ATTCTCGATG AAGCGCACCT TATCCGAAAC GGCAACTCAA AGATGTCCCA GGCAGTCTGT GCACTTGACT CTAAGTCACG GTGGGCTGTT ACCGGTACTC CAATCCAAAA CCGTCTTGGC GACTTGGCGA CTCTATTCAA GTTCATCCGC GCCCACCCCT ACACCGATCG AAGATGCTTC GATGTTGATA TATCCCGCCT CTGGAAGTCC GGCGAGTATG ATGAAGCCAT CAAGAGACTG AAGCGTCTCT CAGCCTGCAT GCTACTCAGG CGACCCAAGG GAACCATCAA CCTTCCCGGC CGGCGGGATA TGCAATGTCC TGTCAATTTT AGCACCGAGG AGAGAGTATT GTACGACAAG ATACGCCAGA AGGCCATTGT GAGCATCGAA GAGGCTCTAG ATAGGGACTC GGAACACTCT AGGGCTGGCA TATACGTCAA CGTCCTGCAG CAGATCGAGT CACTGAGATT GATCTGCAAC CTGGGCCTTC ACTATCATAC GAGACATGAC AAGACCCCTC AAGCCTCCCT GGAAGATAGT GACTGGCCCA GCGCCGCACA GAGGGCTTTC AATGTTCAGC GAGAGATGGG GCCGCTGGTC TGCGTACAGT GCCGGTCAAC ACTCGAGATT GCAGAGACGC TTTTTGAAGA CCCAACCATT TCACAGCAAA GCGCTCAGTT CTCGAGCTGT TTGAGATTTC TCTGTGCAGA TTGCACGCAA AAGAGTTTCC AGGCCAGGCA CGTCGTGGAA TGCGGCCACG ATCCTTCTTG CTCCATGGCC GCTGTCTCTA CGAACAGCAG TGCTCTAGAG TCAAGTCTAG ACGACGTGCA GCAGCAAACA AAGGTCAAGT CCATTGGCCT ATCATCCAAG GTGGAGGCTC TCATGACTGA CATCAAGACT CTACCACCGA GCGAAAAATG CATTGTCTTC TCAACATGGA GACTAACACT GGACATGGTA GAAGTCGGTT TGGAAAAGGC ACACATTCCA AGTGTTCGCT TCGATGGCAA AGTACCTCAA AATGAGCGAC AGGAGATTGT GGAGAGATTC AGAACTGACC CGTCTGTCCG CGTCATGCTC TTGACACTGT CCTGTGGTGC AGCTGGTCTC ACCTTAACGG TAGCAACTAG GGCCTATCTC ATGGAGCCTC ACTGGAACCC AACTCTCGAA GAGCAAGCCC TTGCACGAAT CCACCGAATC GGACAAACAC GAGAGGTGAC CACAGTAAGG TTCTACGTGC GAGATTCTTT CGAGCAGCAT GTCATGGAGG TTCAGGACTC AAAGAAGCAT TTGTCAGGCT TATTGCTCGC ACCTCACGAT GGTGAGCAGG CAGATGAAAG TCGGGGAAGG CTGCAGACGC TGAGATCACT AATTTGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq |
XP_003041607.1 |
CDS | 1..2847 |
Translation | |
Target ORF information:
RefSeq Version | XM_003041561.1 |
Organism | [Nectria] haematococca mpVI 77-13-4 |
Definition | Nectria haematococca mpVI 77-13-4 hypothetical protein (CHR2112), mRNA. |
Target ORF information:
Epitope | DYKDDDDK |
Bacterial selection | AMPR |
Mammalian selection | NeoR |
Vector | pcDNA3.1+/C-(K)DYK |
|
XM_003041561.1 |
ORF Insert Sequence:
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021 1081 1141 1201 1261 1321 1381 1441 1501 1561 1621 1681 1741 1801 1861 1921 1981 2041 2101 2161 2221 2281 2341 2401 2461 2521 2581 2641 2701 2761 2821
| ATGGATATTC AGCCTCACAA CGCTCAGAGC CTGACCCGAC CTGACCACCT CACATCATCC ATTCAAGCTC CAGGGAACAA AGCCAACGGC CCTGACCCAT CATACGAAGC GAACTCAGAC GCAATAGTCT TTCACCTGAC CTTGACCGCG GGCCATCAGG CGGGCTATGA ATCCTCTACA GCACCCACCG CAGCCCAACA GAGCTACTCT GGTTCAGTAG CTCAATGGGT ATCCGCAACA CCGCAACCAG ATGTCTGGCC AACCGGGAAC CTCAACTCGA CCCTGCCGTC TCCCTCTGAC AACCAATGGA ACCCATACCA CAGTTTTCCG TCCCAAAGCG GAGCAGGAAT TTTATTCCAA GGCAATCCCT ACCCAATAGT GGCTAATAAC TCACAGCCGC CATCAACAGC TTTCACCTCA TGGTCATCCG TCCCCCTGCG ATATCCAATG CCGCAAGAAC CTGCTCAAAA CTATCCACTG ATATTTCCTA CATCTTTTTG CCCCCAATAT CCCATGAATA CCACTCAGAT TCCTTTGAGT CTCCAGCCAT GGCAAAGCGC AGTCTGCGTG GAAGCTCAGC TGAATGTCGA CACCATGACA GTCCCGAATC ACAGTCCTCC CACTGCACTC GCACCAGCCC AACAGGCCCC CGAAGAAGAA GGGCCAGAAA TGGTGTGTTT TGGCATGATA CAGAGCTCGA CAGAGTTCAA CTCAAGTGAC TGCCCGGAGA TCTCTGGCCA CATACTATCA GAACATGGCC AAATGGTCCA AGGCCTTCTC GATGAGGAGA CCCTAGACCT CTACGTCTCT TGCACCACCC CAGACTCTCA AGGCTCCGCG CAGCAAAAGA CGCGTTCCAC TCCTCTTCAA TGTACATTGG AGATTACCGT TTATGGTCCC TCGGATCTTT TTGAGGAAAT TGGGACGTGG CACCAGAAGC AGGCTCTCAC ATTCATGTTA CGCCGGGAAC AGGGTTGGGC TTTCTACGAC AAGCGGCCAG ATGTTTGGGA GATGATAGAC ACCGACCAAG GGCGAACCTT CCTCAACCGA ATCTCCAATG CCTATCAACC TGAAGAGCCC CCTCAGTGCT ATGGGGGTAT CATCGCAGAT CCTATGGGAC TTGGCAAGAC TCTCACCATG ATTGCCCTAG CAGCAACCGA TTTGGATGGA AACAACACCG ACATGGACAC AACCGAAGAA TGCCAGCCCA GCGTCTCGGC AACCCTCATT GTCGTTCCAC CTCCACTAAT CGGGACATGG GAAGAGCAAC TATCTGAGTG GGTATCTACG CACGTCATTA ACGGCGGCAT GGCATGGCAC CGCCATCACC GAGAAACTCG CCTCAGCTCC ACAGACAGCC TTGACCACTT GAACATTGTC TTGACAACAT ATCACACAGT CTCTGCAGAG TGGAATAGTG GAAATGGTGT ACCAAACGCA GCTCTCTTTT CAGTGCGATG GGAAAGAATC ATTCTCGATG AAGCGCACCT TATCCGAAAC GGCAACTCAA AGATGTCCCA GGCAGTCTGT GCACTTGACT CTAAGTCACG GTGGGCTGTT ACCGGTACTC CAATCCAAAA CCGTCTTGGC GACTTGGCGA CTCTATTCAA GTTCATCCGC GCCCACCCCT ACACCGATCG AAGATGCTTC GATGTTGATA TATCCCGCCT CTGGAAGTCC GGCGAGTATG ATGAAGCCAT CAAGAGACTG AAGCGTCTCT CAGCCTGCAT GCTACTCAGG CGACCCAAGG GAACCATCAA CCTTCCCGGC CGGCGGGATA TGCAATGTCC TGTCAATTTT AGCACCGAGG AGAGAGTATT GTACGACAAG ATACGCCAGA AGGCCATTGT GAGCATCGAA GAGGCTCTAG ATAGGGACTC GGAACACTCT AGGGCTGGCA TATACGTCAA CGTCCTGCAG CAGATCGAGT CACTGAGATT GATCTGCAAC CTGGGCCTTC ACTATCATAC GAGACATGAC AAGACCCCTC AAGCCTCCCT GGAAGATAGT GACTGGCCCA GCGCCGCACA GAGGGCTTTC AATGTTCAGC GAGAGATGGG GCCGCTGGTC TGCGTACAGT GCCGGTCAAC ACTCGAGATT GCAGAGACGC TTTTTGAAGA CCCAACCATT TCACAGCAAA GCGCTCAGTT CTCGAGCTGT TTGAGATTTC TCTGTGCAGA TTGCACGCAA AAGAGTTTCC AGGCCAGGCA CGTCGTGGAA TGCGGCCACG ATCCTTCTTG CTCCATGGCC GCTGTCTCTA CGAACAGCAG TGCTCTAGAG TCAAGTCTAG ACGACGTGCA GCAGCAAACA AAGGTCAAGT CCATTGGCCT ATCATCCAAG GTGGAGGCTC TCATGACTGA CATCAAGACT CTACCACCGA GCGAAAAATG CATTGTCTTC TCAACATGGA GACTAACACT GGACATGGTA GAAGTCGGTT TGGAAAAGGC ACACATTCCA AGTGTTCGCT TCGATGGCAA AGTACCTCAA AATGAGCGAC AGGAGATTGT GGAGAGATTC AGAACTGACC CGTCTGTCCG CGTCATGCTC TTGACACTGT CCTGTGGTGC AGCTGGTCTC ACCTTAACGG TAGCAACTAG GGCCTATCTC ATGGAGCCTC ACTGGAACCC AACTCTCGAA GAGCAAGCCC TTGCACGAAT CCACCGAATC GGACAAACAC GAGAGGTGAC CACAGTAAGG TTCTACGTGC GAGATTCTTT CGAGCAGCAT GTCATGGAGG TTCAGGACTC AAAGAAGCAT TTGTCAGGCT TATTGCTCGC ACCTCACGAT GGTGAGCAGG CAGATGAAAG TCGGGGAAGG CTGCAGACGC TGAGATCACT AATTTGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
 |
The genome of Nectria haematococca: contribution of supernumerary chromosomes to gene expansion.
PLoS genetics5(8)e1000618(2009 Aug)
Coleman JJ,Rounsley SD,Rodriguez-Carres M,Kuo A,Wasmann CC,Grimwood J,Schmutz J,Taga M,White GJ,Zhou S,Schwartz DC,Freitag M,Ma LJ,Danchin EG,Henrissat B,Coutinho PM,Nelson DR,Straney D,Napoli CA,Barker BM,Gribskov M,Rep M,Kroken S,Moln?r I,Rensing C,Kennell JC,Zamora J,Farman ML,Selker EU,Salamov A,Shapiro H,Pangilinan J,Lindquist E,Lamers C,Grigoriev IV,Geiser DM,Covert SF,Temporini E,Vanetten HD |