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LOC4352689 cDNA ORF clone, Oryza sativa Japonica Group(Japanese rice)

Summary

Gene Symbol LOC4352689
Entrez Gene ID 4352689
Full Name SPX and EXS domain-containing protein 5
Gene Type protein-coding
Organism Oryza sativa Japonica Group(Japanese rice)

Reference Sequences (RefSeq)

mRNA and Protein(s)

mRNA Protein Name
XM_015765219.1 XP_015620705.1 SPX and EXS domain-containing protein 5
XM_015765219.2 XP_015620705.1 SPX and EXS domain-containing protein 5

Pathways from BioSystems


Homologies


Oryza sativa (rice) Os12g0595000 NP_001067180.1
Arabidopsis thaliana (thale cress) AT5G35730 NP_568530.1

Gene Ontology

The following LOC4352689 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC4352689 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OOa43782 XM_015765219.2
Latest version!		 Oryza sativa Japonica Group SPX and EXS domain-containing protein 5 (LOC4352689), mRNA. pcDNA3.1+/C-(K)DYK or customized vector 9-11 $258.30
$369.00
View Old Accession Versions >>
OOa43782 XM_015765219.1 Oryza sativa Japonica Group SPX and EXS domain-containing protein 5 (LOC4352689), mRNA. pcDNA3.1+/C-(K)DYK or customized vector 9-11 $258.30
$369.00
Hide Old Accession Versions >>

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)


CloneID OOa43782
Clone ID Related Accession (Same CDS sequence) XM_015765219.1 , XM_015765219.2
Accession Version XM_015765219.1 Documents for ORF clone product in default vector
Sequence Information ORF Nucleotide Sequence (Length: 1269bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ™ Seamless cloning technology
Insert Structure linear
Update Date 2016-02-29
Organism Oryza sativa Japonica Group(Japanese rice)
Product SPX and EXS domain-containing protein 5
Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_015379185.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Oryza sativa Japonica Group Annotation Release 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.5 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
ATGAAGGGGT CGGCCATCCC GGCGGTCGCG ATCATGCCCT CGCCGCTCTT CCTCTGGCGG 
TTCAAGGTTG TATTGTTTCT CCTATGGGGT TTATGCTGTT GCAAGATAGG TTGGGACTCT 
GTTATGAGAA TGAGTGCTGA TCTGCGAGAC TTATTTCTTT ACGAAGCTTT CTTATACTAC 
AATCCGCTTC TTCTTGTGGC TCTGATGATT TGGTTATGGG GAGTAAACCT GTGGGTCTTT 
GCACAATCAT CAGTGAATTA CGCAAGGGTG TTTGATCTTG CACAAACACA TTTATCGCAT 
CGAGAAATAT GGAGGTGTGC TACTTGGCTT ACTTTGATTG TTCCCACGAG TATGACAGCT 
TACCTATATT TGTACTCACA TGGAGAAGTG TCCCTTGCTG CATCTCAACC AGTTCTTTTA 
TATGCTATCC TTCTTATAGT CCTCTTATCT CCTTTTGATA TGTTTTACCT GTCGTCACGC 
TTTTACTTTC TGAGGACAGT GTGGCGTATA ATGCTTCCAT TGCAAGCAAT TACATTCCCC 
GACTTCTTTT TGGCTGATAT TTTTACATCC ATGTCAAAGG TCTTCTCAGA CTTGGAACGT 
TCAGTTTGTC GCATGGTCAA TCGGCAGGTT GCAACGACCG CTTGGCTTGA AGCAGATTCA 
ATTTGTGGCA GCCATTCTGT AGCTATTCCT CTAGTTCTTG TGTTCCCTTA TTTGTGTCGA 
CTCTTCCAAT GCCTTCGACA ATACAAAGAT ACAAAGGAGA AGACTTGTCT TCTTAATGCA 
CTCAAGTACT CGACAGCGGT TCCGGTGATT TTCCTTTCAG CTCTCAAGTA TCATGTATTC 
CCTGACAAGT GGGTTAGCTT TTATCGACCC CTCTGGCTTA TGTCCAGTGT TATAAATTCG 
CTGTATTCCT TTTACTGGGA TATAAAGCGA GATTGGGATT TGAGCATCTT AACTAGGATT 
TTCATGTTCA AAAACCCAAG TACATGGACT AACCTTCTTT ATGGGCAGAT CTGGGTATAT 
TACTGGGTGT TAGCCAGCAA TCTTGTGCTC CGCTGTACAT GGACGTACAA GCTTTCAGCA 
CATCTTCGGC ACAACTACCT GACAGTGTTT ACAATAGCAG CGCTGGAAAT ATTGAGGCGG 
TTTCAGTGGG TGTTCTTCCG TGTCGAGAAC GAGTGGAACA AGATGACAGC CAAGCAGAGT 
CTGGAAATGT CATCTGACAT GCCCTCTGAA GGAGACAGGC TTTTGGATTC AAATAGTCAT 
ACAGTATGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq XP_015620705.1
CDS421..1689
Translation

Target ORF information:

RefSeq Version XM_015765219.1
Organism Oryza sativa Japonica Group(Japanese rice)
Definition Oryza sativa Japonica Group SPX and EXS domain-containing protein 5 (LOC4352689), mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
 XM_015765219.1

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
ATGAAGGGGT CGGCCATCCC GGCGGTCGCG ATCATGCCCT CGCCGCTCTT CCTCTGGCGG 
TTCAAGGTTG TATTGTTTCT CCTATGGGGT TTATGCTGTT GCAAGATAGG TTGGGACTCT 
GTTATGAGAA TGAGTGCTGA TCTGCGAGAC TTATTTCTTT ACGAAGCTTT CTTATACTAC 
AATCCGCTTC TTCTTGTGGC TCTGATGATT TGGTTATGGG GAGTAAACCT GTGGGTCTTT 
GCACAATCAT CAGTGAATTA CGCAAGGGTG TTTGATCTTG CACAAACACA TTTATCGCAT 
CGAGAAATAT GGAGGTGTGC TACTTGGCTT ACTTTGATTG TTCCCACGAG TATGACAGCT 
TACCTATATT TGTACTCACA TGGAGAAGTG TCCCTTGCTG CATCTCAACC AGTTCTTTTA 
TATGCTATCC TTCTTATAGT CCTCTTATCT CCTTTTGATA TGTTTTACCT GTCGTCACGC 
TTTTACTTTC TGAGGACAGT GTGGCGTATA ATGCTTCCAT TGCAAGCAAT TACATTCCCC 
GACTTCTTTT TGGCTGATAT TTTTACATCC ATGTCAAAGG TCTTCTCAGA CTTGGAACGT 
TCAGTTTGTC GCATGGTCAA TCGGCAGGTT GCAACGACCG CTTGGCTTGA AGCAGATTCA 
ATTTGTGGCA GCCATTCTGT AGCTATTCCT CTAGTTCTTG TGTTCCCTTA TTTGTGTCGA 
CTCTTCCAAT GCCTTCGACA ATACAAAGAT ACAAAGGAGA AGACTTGTCT TCTTAATGCA 
CTCAAGTACT CGACAGCGGT TCCGGTGATT TTCCTTTCAG CTCTCAAGTA TCATGTATTC 
CCTGACAAGT GGGTTAGCTT TTATCGACCC CTCTGGCTTA TGTCCAGTGT TATAAATTCG 
CTGTATTCCT TTTACTGGGA TATAAAGCGA GATTGGGATT TGAGCATCTT AACTAGGATT 
TTCATGTTCA AAAACCCAAG TACATGGACT AACCTTCTTT ATGGGCAGAT CTGGGTATAT 
TACTGGGTGT TAGCCAGCAA TCTTGTGCTC CGCTGTACAT GGACGTACAA GCTTTCAGCA 
CATCTTCGGC ACAACTACCT GACAGTGTTT ACAATAGCAG CGCTGGAAAT ATTGAGGCGG 
TTTCAGTGGG TGTTCTTCCG TGTCGAGAAC GAGTGGAACA AGATGACAGC CAAGCAGAGT 
CTGGAAATGT CATCTGACAT GCCCTCTGAA GGAGACAGGC TTTTGGATTC AAATAGTCAT 
ACAGTATGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

CloneID OOa43782
Clone ID Related Accession (Same CDS sequence) XM_015765219.1 , XM_015765219.2
Accession Version XM_015765219.2 Latest version! Documents for ORF clone product in default vector
Sequence Information ORF Nucleotide Sequence (Length: 1269bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ™ Seamless cloning technology
Insert Structure linear
Update Date 2018-08-06
Organism Oryza sativa Japonica Group(Japanese rice)
Product SPX and EXS domain-containing protein 5
Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_029267.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Aug 7, 2018 this sequence version replaced XM_015765219.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Oryza sativa Japonica Group Annotation Release 102 Annotation Version :: 102 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
ATGAAGGGGT CGGCCATCCC GGCGGTCGCG ATCATGCCCT CGCCGCTCTT CCTCTGGCGG 
TTCAAGGTTG TATTGTTTCT CCTATGGGGT TTATGCTGTT GCAAGATAGG TTGGGACTCT 
GTTATGAGAA TGAGTGCTGA TCTGCGAGAC TTATTTCTTT ACGAAGCTTT CTTATACTAC 
AATCCGCTTC TTCTTGTGGC TCTGATGATT TGGTTATGGG GAGTAAACCT GTGGGTCTTT 
GCACAATCAT CAGTGAATTA CGCAAGGGTG TTTGATCTTG CACAAACACA TTTATCGCAT 
CGAGAAATAT GGAGGTGTGC TACTTGGCTT ACTTTGATTG TTCCCACGAG TATGACAGCT 
TACCTATATT TGTACTCACA TGGAGAAGTG TCCCTTGCTG CATCTCAACC AGTTCTTTTA 
TATGCTATCC TTCTTATAGT CCTCTTATCT CCTTTTGATA TGTTTTACCT GTCGTCACGC 
TTTTACTTTC TGAGGACAGT GTGGCGTATA ATGCTTCCAT TGCAAGCAAT TACATTCCCC 
GACTTCTTTT TGGCTGATAT TTTTACATCC ATGTCAAAGG TCTTCTCAGA CTTGGAACGT 
TCAGTTTGTC GCATGGTCAA TCGGCAGGTT GCAACGACCG CTTGGCTTGA AGCAGATTCA 
ATTTGTGGCA GCCATTCTGT AGCTATTCCT CTAGTTCTTG TGTTCCCTTA TTTGTGTCGA 
CTCTTCCAAT GCCTTCGACA ATACAAAGAT ACAAAGGAGA AGACTTGTCT TCTTAATGCA 
CTCAAGTACT CGACAGCGGT TCCGGTGATT TTCCTTTCAG CTCTCAAGTA TCATGTATTC 
CCTGACAAGT GGGTTAGCTT TTATCGACCC CTCTGGCTTA TGTCCAGTGT TATAAATTCG 
CTGTATTCCT TTTACTGGGA TATAAAGCGA GATTGGGATT TGAGCATCTT AACTAGGATT 
TTCATGTTCA AAAACCCAAG TACATGGACT AACCTTCTTT ATGGGCAGAT CTGGGTATAT 
TACTGGGTGT TAGCCAGCAA TCTTGTGCTC CGCTGTACAT GGACGTACAA GCTTTCAGCA 
CATCTTCGGC ACAACTACCT GACAGTGTTT ACAATAGCAG CGCTGGAAAT ATTGAGGCGG 
TTTCAGTGGG TGTTCTTCCG TGTCGAGAAC GAGTGGAACA AGATGACAGC CAAGCAGAGT 
CTGGAAATGT CATCTGACAT GCCCTCTGAA GGAGACAGGC TTTTGGATTC AAATAGTCAT 
ACAGTATGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq XP_015620705.1
CDS421..1689
Translation

Target ORF information:

RefSeq Version XM_015765219.2
Organism Oryza sativa Japonica Group(Japanese rice)
Definition Oryza sativa Japonica Group SPX and EXS domain-containing protein 5 (LOC4352689), mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
 XM_015765219.2

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
ATGAAGGGGT CGGCCATCCC GGCGGTCGCG ATCATGCCCT CGCCGCTCTT CCTCTGGCGG 
TTCAAGGTTG TATTGTTTCT CCTATGGGGT TTATGCTGTT GCAAGATAGG TTGGGACTCT 
GTTATGAGAA TGAGTGCTGA TCTGCGAGAC TTATTTCTTT ACGAAGCTTT CTTATACTAC 
AATCCGCTTC TTCTTGTGGC TCTGATGATT TGGTTATGGG GAGTAAACCT GTGGGTCTTT 
GCACAATCAT CAGTGAATTA CGCAAGGGTG TTTGATCTTG CACAAACACA TTTATCGCAT 
CGAGAAATAT GGAGGTGTGC TACTTGGCTT ACTTTGATTG TTCCCACGAG TATGACAGCT 
TACCTATATT TGTACTCACA TGGAGAAGTG TCCCTTGCTG CATCTCAACC AGTTCTTTTA 
TATGCTATCC TTCTTATAGT CCTCTTATCT CCTTTTGATA TGTTTTACCT GTCGTCACGC 
TTTTACTTTC TGAGGACAGT GTGGCGTATA ATGCTTCCAT TGCAAGCAAT TACATTCCCC 
GACTTCTTTT TGGCTGATAT TTTTACATCC ATGTCAAAGG TCTTCTCAGA CTTGGAACGT 
TCAGTTTGTC GCATGGTCAA TCGGCAGGTT GCAACGACCG CTTGGCTTGA AGCAGATTCA 
ATTTGTGGCA GCCATTCTGT AGCTATTCCT CTAGTTCTTG TGTTCCCTTA TTTGTGTCGA 
CTCTTCCAAT GCCTTCGACA ATACAAAGAT ACAAAGGAGA AGACTTGTCT TCTTAATGCA 
CTCAAGTACT CGACAGCGGT TCCGGTGATT TTCCTTTCAG CTCTCAAGTA TCATGTATTC 
CCTGACAAGT GGGTTAGCTT TTATCGACCC CTCTGGCTTA TGTCCAGTGT TATAAATTCG 
CTGTATTCCT TTTACTGGGA TATAAAGCGA GATTGGGATT TGAGCATCTT AACTAGGATT 
TTCATGTTCA AAAACCCAAG TACATGGACT AACCTTCTTT ATGGGCAGAT CTGGGTATAT 
TACTGGGTGT TAGCCAGCAA TCTTGTGCTC CGCTGTACAT GGACGTACAA GCTTTCAGCA 
CATCTTCGGC ACAACTACCT GACAGTGTTT ACAATAGCAG CGCTGGAAAT ATTGAGGCGG 
TTTCAGTGGG TGTTCTTCCG TGTCGAGAAC GAGTGGAACA AGATGACAGC CAAGCAGAGT 
CTGGAAATGT CATCTGACAT GCCCTCTGAA GGAGACAGGC TTTTGGATTC AAATAGTCAT 
ACAGTATGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

PubMed