Gene Symbol
PDZRN3
Entrez Gene ID
23024
Full Name
PDZ domain containing ring finger 3
Synonyms
LNX3,SEMACAP3,SEMCAP3
General protein information
Preferred NamesPDZ domain containing ring finger 3
NamesE3 ubiquitin-protein ligase PDZRN3 RING-type E3 ubiquitin transferase PDZRN3 ligand of Numb protein X 3 likely ortholog of mouse semaF cytoplasmic domain associated protein 3 semaphorin cytoplasmic domain-associated protein 3
Gene Type
protein-coding
Organism
Homo sapiens(human)
Genome
Chromosome: 3
Map Location: 3p13
Summary
This gene encodes a member of the LNX (Ligand of Numb Protein-X) family of RING-type ubiquitin E3 ligases. This protein may function in vascular morphogenesis and the differentiation of adipocytes, osteoblasts and myoblasts. This protein may be targeted for degradation by the human papilloma virus E6 protein. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Dec 2014].
Disorder MIM:
609729
mRNA and Protein(s)
mRNA
Protein
Name
NM_015009.2
NP_055824.1
E3 ubiquitin-protein ligase PDZRN3 isoform 1
NM_001303142.1
NP_001290071.1
E3 ubiquitin-protein ligase PDZRN3 isoform 5
NM_001303142.2
NP_001290071.1
E3 ubiquitin-protein ligase PDZRN3 isoform 5
XM_017005942.1
XP_016861431.1
E3 ubiquitin-protein ligase PDZRN3 isoform X1
NM_001303140.1
NP_001290069.1
E3 ubiquitin-protein ligase PDZRN3 isoform 3
XM_017005942.2
XP_016861431.1
E3 ubiquitin-protein ligase PDZRN3 isoform X1
NM_015009.3
NP_055824.1
E3 ubiquitin-protein ligase PDZRN3 isoform 1
NM_001303139.1
NP_001290068.1
E3 ubiquitin-protein ligase PDZRN3 isoform 2
NM_001303140.2
NP_001290069.1
E3 ubiquitin-protein ligase PDZRN3 isoform 3
NM_001303141.1
NP_001290070.1
E3 ubiquitin-protein ligase PDZRN3 isoform 4
Danio rerio (zebrafish)
pdzrn3b
NP_001243321.1
Pan troglodytes (chimpanzee)
PDZRN3
XP_516586.2
Bos taurus (cattle)
PDZRN3
XP_002697002.1
Xenopus tropicalis (tropical clawed frog)
pdzrn3
XP_002938429.1
Mus musculus (house mouse)
Pdzrn3
NP_061372.2
Homo sapiens (human)
PDZRN3
NP_055824.1
PDZRN3
XP_001098466.2
Rattus norvegicus (Norway rat)
Pdzrn3
NP_001258180.1
Gallus gallus (chicken)
PDZRN3
XP_414432.2
Related articles in PubMed
PDZRN3/LNX3 is a novel target of human papillomavirus type 16 (HPV-16) and HPV-18 E6.
Thomas M, Banks L Journal of virology89(2)1439-44(2015 Jan)
The ubiquitin ligase PDZRN3 is required for vascular morphogenesis through Wnt/planar cell polarity signalling.
Sewduth RN, Jaspard-Vinassa B, Peghaire C, Guillabert A, Franzl N, Larrieu-Lahargue F, Moreau C, Fruttiger M, Dufourcq P, Couffinhal T, Dupl?a C Nature communications54832(2014 Sep)
A genome-wide association study for irinotecan-related severe toxicities in patients with advanced non-small-cell lung cancer.
Han JY, Shin ES, Lee YS, Ghang HY, Kim SY, Hwang JA, Kim JY, Lee JS The pharmacogenomics journal13(5)417-22(2013 Oct)
Regulation of adipocyte differentiation of 3T3-L1 cells by PDZRN3.
Honda T, Ishii A, Inui M American journal of physiology. Cell physiology304(11)C1091-7(2013 Jun)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following PDZRN3 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the PDZRN3 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+ /C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID
OHu65305
Clone ID Related Accession (Same CDS sequence)
NM_015009.2
, NM_015009.3
Accession Version
NM_015009.3 Latest version!
Documents for ORF clone product in default vector
Sequence Information
ORF Nucleotide Sequence (Length: 3201bp)
Protein sequence
SNP
Vector
pcDNA3.1+ /C-(K)DYK or customized vector
User Manual
Clone information
Clone Map
MSDS
Tag on pcDNA3.1+ /C-(K)DYK
C terminal DYKDDDDK tags
ORF Insert Method
CloneEZ™ Seamless cloning technology
Insert Structure
linear
Update Date
2019-12-29
Organism
Homo sapiens(human)
Product
E3 ubiquitin-protein ligase PDZRN3 isoform 1
Comment
Comment: REVIEWED REFSEQ: This record has been curated by NCBI staff. The reference sequence was derived from AC117489.3, AB029018.1, DB727809.1 and AW661852.1. This sequence is a reference standard in the RefSeqGene project. On Nov 22, 2018 this sequence version replaced NM_015009.2.
Transcript Variant: This variant (1) represents the longest transcript and encodes the longest isoform (1).
Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications.
##Evidence-Data-START##
Transcript exon combination :: AB029018.1, SRR1803611.122628.1 [ECO:0000332]
RNAseq introns :: mixed/partial sample support SAMEA1965299, SAMEA1966682 [ECO:0000350]
##Evidence-Data-END##
##RefSeq-Attributes-START##
MANE Ensembl match :: ENST00000263666.9/ ENSP00000263666.4
RefSeq Select criteria :: based on conservation, expression, longest protein
##RefSeq-Attributes-END##
COMPLETENESS: full length.
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021 1081 1141 1201 1261 1321 1381 1441 1501 1561 1621 1681 1741 1801 1861 1921 1981 2041 2101 2161 2221 2281 2341 2401 2461 2521 2581 2641 2701 2761 2821 2881 2941 3001 3061 3121 3181 ATGGGCTTCG AGCTGGACCG CTTCGACGGC GACGTGGACC CGGACCTGAA GTGCGCGCTG TGCCACAAGG TCCTGGAGGA CCCGCTGACC ACGCCGTGCG GCCACGTCTT CTGCGCCGGC TGCGTGCTGC CCTGGGTGGT GCAGGAGGGC AGCTGCCCGG CGCGCTGCCG CGGTCGCCTG TCGGCCAAAG AGCTCAACCA CGTCCTGCCG CTCAAGCGCC TTATCCTCAA GCTGGACATC AAGTGCGCGT ACGCGACGCG CGGCTGCGGC CGGGTGGTCA AGCTGCAGCA GCTGCCGGAG CACCTCGAGC GCTGCGACTT CGCGCCCGCG CGCTGTCGCC ACGCGGGTTG CGGCCAGGTG CTGCTGCGGC GCGACGTGGA GGCGCACATG CGCGACGCCT GCGACGCGCG GCCAGTGGGC CGCTGCCAGG AGGGCTGCGG GCTACCCTTG ACGCACGGCG AGCAGCGCGC GGGCGGCCAC TGCTGCGCGC GAGCGCTGCG GGCGCACAAC GGCGCGCTCC AGGCCCGCCT GGGCGCGCTG CACAAGGCGC TCAAGAAGGA GGCGCTGCGC GCTGGGAAGC GCGAGAAGTC GCTGGTGGCC CAGCTGGCCG CGGCGCAGCT TGAGCTGCAG ATGACCGCGC TGCGCTACCA GAAGAAATTC ACCGAATACA GCGCGCGCCT CGACTCGCTC AGCCGCTGCG TGGCCGCGCC GCCCGGCGGC AAGGGCGAAG AAACCAAAAG TCTGACTCTT GTCCTGCATC GGGACTCCGG CTCCCTGGGA TTCAATATTA TTGGTGGCCG GCCGAGTGTG GATAACCACG ATGGATCATC CAGTGAAGGA ATCTTTGTAT CCAAGATAGT TGACAGTGGG CCTGCAGCCA AGGAAGGAGG CCTGCAAATT CATGACAGGA TTATTGAGGT CAACGGCAGA GACTTATCCA GAGCAACTCA TGACCAGGCT GTGGAAGCTT TCAAGACAGC CAAGGAGCCC ATAGTGGTGC AGGTGTTGAG AAGAACACCA AGGACCAAAA TGTTCACGCC TCCATCAGAG TCTCAGCTGG TGGACACGGG AACCCAAACC GACATCACCT TTGAACATAT CATGGCCCTC ACTAAGATGT CCTCTCCCAG CCCACCCGTG CTGGATCCCT ATCTCTTGCC AGAGGAGCAT CCCTCAGCCC ATGAATACTA CGATCCAAAT GACTACATTG GAGACATCCA TCAGGAGATG GACAGGGAGG AGCTGGAGCT GGAGGAAGTG GACCTCTACA GAATGAACAG CCAGGACAAG CTGGGCCTCA CTGTGTGCTA CCGGACGGAC GATGAAGACG ACATTGGGAT TTATATCAGT GAGATTGACC CTAACAGCAT TGCAGCCAAG GATGGGCGCA TCCGAGAAGG AGACCGCATT ATCCAGATTA ATGGGATAGA GGTGCAGAAC CGTGAAGAGG CTGTGGCTCT TCTAACCAGT GAAGAAAATA AAAACTTTTC ATTGCTGATT GCAAGGCCTG AACTCCAGCT GGATGAGGGC TGGATGGATG ATGACAGGAA CGACTTTCTG GATGACCTGC ACATGGACAT GCTGGAGGAG CAGCACCACC AGGCCATGCA ATTCACAGCT AGCGTGCTGC AGCAGAAGAA GCACGACGAA GACGGTGGGA CCACAGATAC AGCCACCATC TTGTCCAACC AGCACGAGAA GGACAGCGGT GTGGGGCGGA CCGACGAGAG CACCCGTAAT GACGAGAGCT CGGAGCAAGA GAACAATGGC GACGACGCCA CCGCATCCTC CAACCCGCTG GCGGGGCAGA GGAAGCTCAC CTGCAGCCAG GACACCTTGG GCAGCGGCGA CCTGCCCTTC AGCAACGAGT CTTTCATTTC GGCCGACTGC ACGGACGCCG ACTACCTGGG GATCCCGGTG GACGAGTGCG AGCGCTTCCG CGAGCTCCTG GAGCTCAAGT GCCAGGTGAA GAGCGCCACC CCTTACGGCC TGTACTACCC TAGCGGCCCC CTGGACGCCG GCAAGAGTGA CCCTGAGAGC GTGGACAAGG AGCTGGAGCT GCTGAACGAA GAGCTGCGCA GCATCGAGCT GGAGTGCCTG AGCATCGTGC GCGCCCACAA GATGCAGCAG CTCAAGGAGC AGTACCGCGA GTCCTGGATG CTGCACAACA GCGGCTTCCG CAACTACAAC ACCAGCATCG ACGTGCGCAG ACACGAGCTC TCAGATATCA CCGAGCTCCC GGAGAAATCC GACAAGGACA GCTCGAGCGC CTACAACACA GGCGAGAGCT GCCGCAGCAC CCCGCTCACC CTGGAGATCT CCCCCGACAA CTCCTTGAGG AGAGCGGCGG AGGGCATCAG CTGCCCGAGC AGCGAAGGGG CTGTGGGGAC CACGGAAGCC TACGGGCCAG CCTCCAAGAA TCTGCTCTCC ATCACGGAAG ATCCCGAAGT GGGCACCCCT ACCTATAGCC CGTCCCTGAA GGAGCTGGAC CCCAACCAGC CCCTGGAAAG CAAAGAGCGG AGAGCCAGCG ACGGGAGCCG GAGCCCCACG CCCAGCCAGA AGCTGGGCAG CGCCTACCTG CCCTCCTATC ACCACTCCCC ATACAAGCAC GCGCACATCC CGGCGCACGC CCAGCACTAC CAGAGCTACA TGCAGCTGAT CCAGCAGAAG TCGGCCGTGG AGTACGCGCA AAGCCAGATG AGCCTGGTGA GCATGTGCAA GGACCTGAGC TCTCCCACCC CGTCGGAGCC GCGCATGGAG TGGAAGGTGA AGATCCGCAG CGACGGGACG CGCTACATCA CCAAGAGGCC CGTGCGGGAC CGCCTGCTGC GGGAGCGCGC CCTGAAGATC CGGGAAGAGC GCAGCGGCAT GACCACCGAC GACGACGCGG TGAGCGAGAT GAAGATGGGG CGCTACTGGA GCAAGGAGGA GAGGAAGCAG CACCTGGTGA AGGCCAAGGA GCAGCGGCGG CGGCGCGAGT TCATGATGCA GAGCAGGTTG GATTGTCTCA AGGAGCAGCA AGCAGCCGAT GACAGGAAGG AGATGAACAT TCTCGAACTG AGCCACAAAA AGATGATGAA GAAGAGGAAT AAGAAAATCT TCGATAACTG GATGACGATC CAAGAACTCT TAACCCACGG CACAAAATCC CCGGACGGCA CTAGAGTATA CAATTCCTTC CTATCGGTGA CTACTGTATA A
The stop codons will be deleted if pcDNA3.1+ /C-(K)DYK vector is selected.
RefSeq
NP_055824.1
CDS 117..3317
Translation
Target ORF information:
RefSeq Version NM_015009.3
Organism Homo sapiens(human)
Definition Homo sapiens PDZ domain containing ring finger 3 (PDZRN3), transcript variant 1, mRNA.
Target ORF information:
Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+ /C-(K)DYK
NM_015009.3
ORF Insert Sequence:
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021 1081 1141 1201 1261 1321 1381 1441 1501 1561 1621 1681 1741 1801 1861 1921 1981 2041 2101 2161 2221 2281 2341 2401 2461 2521 2581 2641 2701 2761 2821 2881 2941 3001 3061 3121 3181 ATGGGCTTCG AGCTGGACCG CTTCGACGGC GACGTGGACC CGGACCTGAA GTGCGCGCTG TGCCACAAGG TCCTGGAGGA CCCGCTGACC ACGCCGTGCG GCCACGTCTT CTGCGCCGGC TGCGTGCTGC CCTGGGTGGT GCAGGAGGGC AGCTGCCCGG CGCGCTGCCG CGGTCGCCTG TCGGCCAAAG AGCTCAACCA CGTCCTGCCG CTCAAGCGCC TTATCCTCAA GCTGGACATC AAGTGCGCGT ACGCGACGCG CGGCTGCGGC CGGGTGGTCA AGCTGCAGCA GCTGCCGGAG CACCTCGAGC GCTGCGACTT CGCGCCCGCG CGCTGTCGCC ACGCGGGTTG CGGCCAGGTG CTGCTGCGGC GCGACGTGGA GGCGCACATG CGCGACGCCT GCGACGCGCG GCCAGTGGGC CGCTGCCAGG AGGGCTGCGG GCTACCCTTG ACGCACGGCG AGCAGCGCGC GGGCGGCCAC TGCTGCGCGC GAGCGCTGCG GGCGCACAAC GGCGCGCTCC AGGCCCGCCT GGGCGCGCTG CACAAGGCGC TCAAGAAGGA GGCGCTGCGC GCTGGGAAGC GCGAGAAGTC GCTGGTGGCC CAGCTGGCCG CGGCGCAGCT TGAGCTGCAG ATGACCGCGC TGCGCTACCA GAAGAAATTC ACCGAATACA GCGCGCGCCT CGACTCGCTC AGCCGCTGCG TGGCCGCGCC GCCCGGCGGC AAGGGCGAAG AAACCAAAAG TCTGACTCTT GTCCTGCATC GGGACTCCGG CTCCCTGGGA TTCAATATTA TTGGTGGCCG GCCGAGTGTG GATAACCACG ATGGATCATC CAGTGAAGGA ATCTTTGTAT CCAAGATAGT TGACAGTGGG CCTGCAGCCA AGGAAGGAGG CCTGCAAATT CATGACAGGA TTATTGAGGT CAACGGCAGA GACTTATCCA GAGCAACTCA TGACCAGGCT GTGGAAGCTT TCAAGACAGC CAAGGAGCCC ATAGTGGTGC AGGTGTTGAG AAGAACACCA AGGACCAAAA TGTTCACGCC TCCATCAGAG TCTCAGCTGG TGGACACGGG AACCCAAACC GACATCACCT TTGAACATAT CATGGCCCTC ACTAAGATGT CCTCTCCCAG CCCACCCGTG CTGGATCCCT ATCTCTTGCC AGAGGAGCAT CCCTCAGCCC ATGAATACTA CGATCCAAAT GACTACATTG GAGACATCCA TCAGGAGATG GACAGGGAGG AGCTGGAGCT GGAGGAAGTG GACCTCTACA GAATGAACAG CCAGGACAAG CTGGGCCTCA CTGTGTGCTA CCGGACGGAC GATGAAGACG ACATTGGGAT TTATATCAGT GAGATTGACC CTAACAGCAT TGCAGCCAAG GATGGGCGCA TCCGAGAAGG AGACCGCATT ATCCAGATTA ATGGGATAGA GGTGCAGAAC CGTGAAGAGG CTGTGGCTCT TCTAACCAGT GAAGAAAATA AAAACTTTTC ATTGCTGATT GCAAGGCCTG AACTCCAGCT GGATGAGGGC TGGATGGATG ATGACAGGAA CGACTTTCTG GATGACCTGC ACATGGACAT GCTGGAGGAG CAGCACCACC AGGCCATGCA ATTCACAGCT AGCGTGCTGC AGCAGAAGAA GCACGACGAA GACGGTGGGA CCACAGATAC AGCCACCATC TTGTCCAACC AGCACGAGAA GGACAGCGGT GTGGGGCGGA CCGACGAGAG CACCCGTAAT GACGAGAGCT CGGAGCAAGA GAACAATGGC GACGACGCCA CCGCATCCTC CAACCCGCTG GCGGGGCAGA GGAAGCTCAC CTGCAGCCAG GACACCTTGG GCAGCGGCGA CCTGCCCTTC AGCAACGAGT CTTTCATTTC GGCCGACTGC ACGGACGCCG ACTACCTGGG GATCCCGGTG GACGAGTGCG AGCGCTTCCG CGAGCTCCTG GAGCTCAAGT GCCAGGTGAA GAGCGCCACC CCTTACGGCC TGTACTACCC TAGCGGCCCC CTGGACGCCG GCAAGAGTGA CCCTGAGAGC GTGGACAAGG AGCTGGAGCT GCTGAACGAA GAGCTGCGCA GCATCGAGCT GGAGTGCCTG AGCATCGTGC GCGCCCACAA GATGCAGCAG CTCAAGGAGC AGTACCGCGA GTCCTGGATG CTGCACAACA GCGGCTTCCG CAACTACAAC ACCAGCATCG ACGTGCGCAG ACACGAGCTC TCAGATATCA CCGAGCTCCC GGAGAAATCC GACAAGGACA GCTCGAGCGC CTACAACACA GGCGAGAGCT GCCGCAGCAC CCCGCTCACC CTGGAGATCT CCCCCGACAA CTCCTTGAGG AGAGCGGCGG AGGGCATCAG CTGCCCGAGC AGCGAAGGGG CTGTGGGGAC CACGGAAGCC TACGGGCCAG CCTCCAAGAA TCTGCTCTCC ATCACGGAAG ATCCCGAAGT GGGCACCCCT ACCTATAGCC CGTCCCTGAA GGAGCTGGAC CCCAACCAGC CCCTGGAAAG CAAAGAGCGG AGAGCCAGCG ACGGGAGCCG GAGCCCCACG CCCAGCCAGA AGCTGGGCAG CGCCTACCTG CCCTCCTATC ACCACTCCCC ATACAAGCAC GCGCACATCC CGGCGCACGC CCAGCACTAC CAGAGCTACA TGCAGCTGAT CCAGCAGAAG TCGGCCGTGG AGTACGCGCA AAGCCAGATG AGCCTGGTGA GCATGTGCAA GGACCTGAGC TCTCCCACCC CGTCGGAGCC GCGCATGGAG TGGAAGGTGA AGATCCGCAG CGACGGGACG CGCTACATCA CCAAGAGGCC CGTGCGGGAC CGCCTGCTGC GGGAGCGCGC CCTGAAGATC CGGGAAGAGC GCAGCGGCAT GACCACCGAC GACGACGCGG TGAGCGAGAT GAAGATGGGG CGCTACTGGA GCAAGGAGGA GAGGAAGCAG CACCTGGTGA AGGCCAAGGA GCAGCGGCGG CGGCGCGAGT TCATGATGCA GAGCAGGTTG GATTGTCTCA AGGAGCAGCA AGCAGCCGAT GACAGGAAGG AGATGAACAT TCTCGAACTG AGCCACAAAA AGATGATGAA GAAGAGGAAT AAGAAAATCT TCGATAACTG GATGACGATC CAAGAACTCT TAACCCACGG CACAAAATCC CCGGACGGCA CTAGAGTATA CAATTCCTTC CTATCGGTGA CTACTGTATA A
The stop codons will be deleted if pcDNA3.1+ /C-(K)DYK vector is selected.
CloneID
OHu37064
Clone ID Related Accession (Same CDS sequence)
NM_001303142.1
, NM_001303142.2
Accession Version
NM_001303142.1
Documents for ORF clone product in default vector
Sequence Information
ORF Nucleotide Sequence (Length: 2352bp)
Protein sequence
SNP
Vector
pcDNA3.1+ /C-(K)DYK or customized vector
User Manual
Clone information
Clone Map
MSDS
Tag on pcDNA3.1+ /C-(K)DYK
C terminal DYKDDDDK tags
ORF Insert Method
CloneEZ™ Seamless cloning technology
Insert Structure
linear
Update Date
2018-12-03
Organism
Homo sapiens(human)
Product
E3 ubiquitin-protein ligase PDZRN3 isoform 5
Comment
Comment: REVIEWED REFSEQ: This record has been curated by NCBI staff. The reference sequence was derived from DC370885.1, AK299560.1, AB029018.1 and AW661852.1.
Transcript Variant: This variant (5) lacks several exons and uses an alternate 5' terminal exon, compared to variant 1. These differences result in a distinct 5' UTR and cause translation initiation at an alternate downstream start codon, compared to variant 1. The resulting protein (isoform 5) has a distinct N-terminus and is shorter than isoform 1.
Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications.
##Evidence-Data-START##
Transcript exon combination :: SRR1803615.259393.1, AK299560.1 [ECO:0000332]
RNAseq introns :: mixed/partial sample support SAMEA1965299, SAMEA1966682 [ECO:0000350]
##Evidence-Data-END##
COMPLETENESS: complete on the 3' end.
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021 1081 1141 1201 1261 1321 1381 1441 1501 1561 1621 1681 1741 1801 1861 1921 1981 2041 2101 2161 2221 2281 2341 ATGGGATGCA GTCTGTGCAG CCTGCAGAAG CAAGAGGAGC AGTACAAATT ACTCTATGAA GTTTGTCAGG TCAACGGCAG AGACTTATCC AGAGCAACTC ATGACCAGGC TGTGGAAGCT TTCAAGACAG CCAAGGAGCC CATAGTGGTG CAGGTGTTGA GAAGAACACC AAGGACCAAA ATGTTCACGC CTCCATCAGA GTCTCAGCTG GTGGACACGG GAACCCAAAC CGACATCACC TTTGAACATA TCATGGCCCT CACTAAGATG TCCTCTCCCA GCCCACCCGT GCTGGATCCC TATCTCTTGC CAGAGGAGCA TCCCTCAGCC CATGAATACT ACGATCCAAA TGACTACATT GGAGACATCC ATCAGGAGAT GGACAGGGAG GAGCTGGAGC TGGAGGAAGT GGACCTCTAC AGAATGAACA GCCAGGACAA GCTGGGCCTC ACTGTGTGCT ACCGGACGGA CGATGAAGAC GACATTGGGA TTTATATCAG TGAGATTGAC CCTAACAGCA TTGCAGCCAA GGATGGGCGC ATCCGAGAAG GAGACCGCAT TATCCAGATT AATGGGATAG AGGTGCAGAA CCGTGAAGAG GCTGTGGCTC TTCTAACCAG TGAAGAAAAT AAAAACTTTT CATTGCTGAT TGCAAGGCCT GAACTCCAGC TGGATGAGGG CTGGATGGAT GATGACAGGA ACGACTTTCT GGATGACCTG CACATGGACA TGCTGGAGGA GCAGCACCAC CAGGCCATGC AATTCACAGC TAGCGTGCTG CAGCAGAAGA AGCACGACGA AGACGGTGGG ACCACAGATA CAGCCACCAT CTTGTCCAAC CAGCACGAGA AGGACAGCGG TGTGGGGCGG ACCGACGAGA GCACCCGTAA TGACGAGAGC TCGGAGCAAG AGAACAATGG CGACGACGCC ACCGCATCCT CCAACCCGCT GGCGGGGCAG AGGAAGCTCA CCTGCAGCCA GGACACCTTG GGCAGCGGCG ACCTGCCCTT CAGCAACGAG TCTTTCATTT CGGCCGACTG CACGGACGCC GACTACCTGG GGATCCCGGT GGACGAGTGC GAGCGCTTCC GCGAGCTCCT GGAGCTCAAG TGCCAGGTGA AGAGCGCCAC CCCTTACGGC CTGTACTACC CTAGCGGCCC CCTGGACGCC GGCAAGAGTG ACCCTGAGAG CGTGGACAAG GAGCTGGAGC TGCTGAACGA AGAGCTGCGC AGCATCGAGC TGGAGTGCCT GAGCATCGTG CGCGCCCACA AGATGCAGCA GCTCAAGGAG CAGTACCGCG AGTCCTGGAT GCTGCACAAC AGCGGCTTCC GCAACTACAA CACCAGCATC GACGTGCGCA GACACGAGCT CTCAGATATC ACCGAGCTCC CGGAGAAATC CGACAAGGAC AGCTCGAGCG CCTACAACAC AGGCGAGAGC TGCCGCAGCA CCCCGCTCAC CCTGGAGATC TCCCCCGACA ACTCCTTGAG GAGAGCGGCG GAGGGCATCA GCTGCCCGAG CAGCGAAGGG GCTGTGGGGA CCACGGAAGC CTACGGGCCA GCCTCCAAGA ATCTGCTCTC CATCACGGAA GATCCCGAAG TGGGCACCCC TACCTATAGC CCGTCCCTGA AGGAGCTGGA CCCCAACCAG CCCCTGGAAA GCAAAGAGCG GAGAGCCAGC GACGGGAGCC GGAGCCCCAC GCCCAGCCAG AAGCTGGGCA GCGCCTACCT GCCCTCCTAT CACCACTCCC CATACAAGCA CGCGCACATC CCGGCGCACG CCCAGCACTA CCAGAGCTAC ATGCAGCTGA TCCAGCAGAA GTCGGCCGTG GAGTACGCGC AAAGCCAGAT GAGCCTGGTG AGCATGTGCA AGGACCTGAG CTCTCCCACC CCGTCGGAGC CGCGCATGGA GTGGAAGGTG AAGATCCGCA GCGACGGGAC GCGCTACATC ACCAAGAGGC CCGTGCGGGA CCGCCTGCTG CGGGAGCGCG CCCTGAAGAT CCGGGAAGAG CGCAGCGGCA TGACCACCGA CGACGACGCG GTGAGCGAGA TGAAGATGGG GCGCTACTGG AGCAAGGAGG AGAGGAAGCA GCACCTGGTG AAGGCCAAGG AGCAGCGGCG GCGGCGCGAG TTCATGATGC AGAGCAGGTT GGATTGTCTC AAGGAGCAGC AAGCAGCCGA TGACAGGAAG GAGATGAACA TTCTCGAACT GAGCCACAAA AAGATGATGA AGAAGAGGAA TAAGAAAATC TTCGATAACT GGATGACGAT CCAAGAACTC TTAACCCACG GCACAAAATC CCCGGACGGC ACTAGAGTAT ACAATTCCTT CCTATCGGTG ACTACTGTAT AA
The stop codons will be deleted if pcDNA3.1+ /C-(K)DYK vector is selected.
RefSeq
NP_001290071.1
CDS 290..2641
Translation
Target ORF information:
RefSeq Version NM_001303142.1
Organism Homo sapiens(human)
Definition Homo sapiens PDZ domain containing ring finger 3 (PDZRN3), transcript variant 5, mRNA.
Target ORF information:
Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+ /C-(K)DYK
NM_001303142.1
ORF Insert Sequence:
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021 1081 1141 1201 1261 1321 1381 1441 1501 1561 1621 1681 1741 1801 1861 1921 1981 2041 2101 2161 2221 2281 2341 ATGGGATGCA GTCTGTGCAG CCTGCAGAAG CAAGAGGAGC AGTACAAATT ACTCTATGAA GTTTGTCAGG TCAACGGCAG AGACTTATCC AGAGCAACTC ATGACCAGGC TGTGGAAGCT TTCAAGACAG CCAAGGAGCC CATAGTGGTG CAGGTGTTGA GAAGAACACC AAGGACCAAA ATGTTCACGC CTCCATCAGA GTCTCAGCTG GTGGACACGG GAACCCAAAC CGACATCACC TTTGAACATA TCATGGCCCT CACTAAGATG TCCTCTCCCA GCCCACCCGT GCTGGATCCC TATCTCTTGC CAGAGGAGCA TCCCTCAGCC CATGAATACT ACGATCCAAA TGACTACATT GGAGACATCC ATCAGGAGAT GGACAGGGAG GAGCTGGAGC TGGAGGAAGT GGACCTCTAC AGAATGAACA GCCAGGACAA GCTGGGCCTC ACTGTGTGCT ACCGGACGGA CGATGAAGAC GACATTGGGA TTTATATCAG TGAGATTGAC CCTAACAGCA TTGCAGCCAA GGATGGGCGC ATCCGAGAAG GAGACCGCAT TATCCAGATT AATGGGATAG AGGTGCAGAA CCGTGAAGAG GCTGTGGCTC TTCTAACCAG TGAAGAAAAT AAAAACTTTT CATTGCTGAT TGCAAGGCCT GAACTCCAGC TGGATGAGGG CTGGATGGAT GATGACAGGA ACGACTTTCT GGATGACCTG CACATGGACA TGCTGGAGGA GCAGCACCAC CAGGCCATGC AATTCACAGC TAGCGTGCTG CAGCAGAAGA AGCACGACGA AGACGGTGGG ACCACAGATA CAGCCACCAT CTTGTCCAAC CAGCACGAGA AGGACAGCGG TGTGGGGCGG ACCGACGAGA GCACCCGTAA TGACGAGAGC TCGGAGCAAG AGAACAATGG CGACGACGCC ACCGCATCCT CCAACCCGCT GGCGGGGCAG AGGAAGCTCA CCTGCAGCCA GGACACCTTG GGCAGCGGCG ACCTGCCCTT CAGCAACGAG TCTTTCATTT CGGCCGACTG CACGGACGCC GACTACCTGG GGATCCCGGT GGACGAGTGC GAGCGCTTCC GCGAGCTCCT GGAGCTCAAG TGCCAGGTGA AGAGCGCCAC CCCTTACGGC CTGTACTACC CTAGCGGCCC CCTGGACGCC GGCAAGAGTG ACCCTGAGAG CGTGGACAAG GAGCTGGAGC TGCTGAACGA AGAGCTGCGC AGCATCGAGC TGGAGTGCCT GAGCATCGTG CGCGCCCACA AGATGCAGCA GCTCAAGGAG CAGTACCGCG AGTCCTGGAT GCTGCACAAC AGCGGCTTCC GCAACTACAA CACCAGCATC GACGTGCGCA GACACGAGCT CTCAGATATC ACCGAGCTCC CGGAGAAATC CGACAAGGAC AGCTCGAGCG CCTACAACAC AGGCGAGAGC TGCCGCAGCA CCCCGCTCAC CCTGGAGATC TCCCCCGACA ACTCCTTGAG GAGAGCGGCG GAGGGCATCA GCTGCCCGAG CAGCGAAGGG GCTGTGGGGA CCACGGAAGC CTACGGGCCA GCCTCCAAGA ATCTGCTCTC CATCACGGAA GATCCCGAAG TGGGCACCCC TACCTATAGC CCGTCCCTGA AGGAGCTGGA CCCCAACCAG CCCCTGGAAA GCAAAGAGCG GAGAGCCAGC GACGGGAGCC GGAGCCCCAC GCCCAGCCAG AAGCTGGGCA GCGCCTACCT GCCCTCCTAT CACCACTCCC CATACAAGCA CGCGCACATC CCGGCGCACG CCCAGCACTA CCAGAGCTAC ATGCAGCTGA TCCAGCAGAA GTCGGCCGTG GAGTACGCGC AAAGCCAGAT GAGCCTGGTG AGCATGTGCA AGGACCTGAG CTCTCCCACC CCGTCGGAGC CGCGCATGGA GTGGAAGGTG AAGATCCGCA GCGACGGGAC GCGCTACATC ACCAAGAGGC CCGTGCGGGA CCGCCTGCTG CGGGAGCGCG CCCTGAAGAT CCGGGAAGAG CGCAGCGGCA TGACCACCGA CGACGACGCG GTGAGCGAGA TGAAGATGGG GCGCTACTGG AGCAAGGAGG AGAGGAAGCA GCACCTGGTG AAGGCCAAGG AGCAGCGGCG GCGGCGCGAG TTCATGATGC AGAGCAGGTT GGATTGTCTC AAGGAGCAGC AAGCAGCCGA TGACAGGAAG GAGATGAACA TTCTCGAACT GAGCCACAAA AAGATGATGA AGAAGAGGAA TAAGAAAATC TTCGATAACT GGATGACGAT CCAAGAACTC TTAACCCACG GCACAAAATC CCCGGACGGC ACTAGAGTAT ACAATTCCTT CCTATCGGTG ACTACTGTAT AA
The stop codons will be deleted if pcDNA3.1+ /C-(K)DYK vector is selected.
CloneID
OHu37064
Clone ID Related Accession (Same CDS sequence)
NM_001303142.1
, NM_001303142.2
Accession Version
NM_001303142.2 Latest version!
Documents for ORF clone product in default vector
Sequence Information
ORF Nucleotide Sequence (Length: 2352bp)
Protein sequence
SNP
Vector
pcDNA3.1+ /C-(K)DYK or customized vector
User Manual
Clone information
Clone Map
MSDS
Tag on pcDNA3.1+ /C-(K)DYK
C terminal DYKDDDDK tags
ORF Insert Method
CloneEZ™ Seamless cloning technology
Insert Structure
linear
Update Date
2020-01-03
Organism
Homo sapiens(human)
Product
E3 ubiquitin-protein ligase PDZRN3 isoform 5
Comment
Comment: REVIEWED REFSEQ: This record has been curated by NCBI staff. The reference sequence was derived from DC370885.1, AK299560.1, AB029018.1 and AW661852.1. On May 31, 2019 this sequence version replaced NM_001303142.1.
Transcript Variant: This variant (5) lacks several exons and uses an alternate 5' terminal exon, compared to variant 1. These differences result in a distinct 5' UTR and cause translation initiation at an alternate downstream start codon, compared to variant 1. The resulting protein (isoform 5) has a distinct N-terminus and is shorter than isoform 1.
Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications.
##Evidence-Data-START##
Transcript exon combination :: SRR1803615.259393.1, SRR7410570.221011.1 [ECO:0000332]
RNAseq introns :: mixed/partial sample support SAMEA1965299, SAMEA1966682 [ECO:0000350]
##Evidence-Data-END##
COMPLETENESS: complete on the 3' end.
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021 1081 1141 1201 1261 1321 1381 1441 1501 1561 1621 1681 1741 1801 1861 1921 1981 2041 2101 2161 2221 2281 2341 ATGGGATGCA GTCTGTGCAG CCTGCAGAAG CAAGAGGAGC AGTACAAATT ACTCTATGAA GTTTGTCAGG TCAACGGCAG AGACTTATCC AGAGCAACTC ATGACCAGGC TGTGGAAGCT TTCAAGACAG CCAAGGAGCC CATAGTGGTG CAGGTGTTGA GAAGAACACC AAGGACCAAA ATGTTCACGC CTCCATCAGA GTCTCAGCTG GTGGACACGG GAACCCAAAC CGACATCACC TTTGAACATA TCATGGCCCT CACTAAGATG TCCTCTCCCA GCCCACCCGT GCTGGATCCC TATCTCTTGC CAGAGGAGCA TCCCTCAGCC CATGAATACT ACGATCCAAA TGACTACATT GGAGACATCC ATCAGGAGAT GGACAGGGAG GAGCTGGAGC TGGAGGAAGT GGACCTCTAC AGAATGAACA GCCAGGACAA GCTGGGCCTC ACTGTGTGCT ACCGGACGGA CGATGAAGAC GACATTGGGA TTTATATCAG TGAGATTGAC CCTAACAGCA TTGCAGCCAA GGATGGGCGC ATCCGAGAAG GAGACCGCAT TATCCAGATT AATGGGATAG AGGTGCAGAA CCGTGAAGAG GCTGTGGCTC TTCTAACCAG TGAAGAAAAT AAAAACTTTT CATTGCTGAT TGCAAGGCCT GAACTCCAGC TGGATGAGGG CTGGATGGAT GATGACAGGA ACGACTTTCT GGATGACCTG CACATGGACA TGCTGGAGGA GCAGCACCAC CAGGCCATGC AATTCACAGC TAGCGTGCTG CAGCAGAAGA AGCACGACGA AGACGGTGGG ACCACAGATA CAGCCACCAT CTTGTCCAAC CAGCACGAGA AGGACAGCGG TGTGGGGCGG ACCGACGAGA GCACCCGTAA TGACGAGAGC TCGGAGCAAG AGAACAATGG CGACGACGCC ACCGCATCCT CCAACCCGCT GGCGGGGCAG AGGAAGCTCA CCTGCAGCCA GGACACCTTG GGCAGCGGCG ACCTGCCCTT CAGCAACGAG TCTTTCATTT CGGCCGACTG CACGGACGCC GACTACCTGG GGATCCCGGT GGACGAGTGC GAGCGCTTCC GCGAGCTCCT GGAGCTCAAG TGCCAGGTGA AGAGCGCCAC CCCTTACGGC CTGTACTACC CTAGCGGCCC CCTGGACGCC GGCAAGAGTG ACCCTGAGAG CGTGGACAAG GAGCTGGAGC TGCTGAACGA AGAGCTGCGC AGCATCGAGC TGGAGTGCCT GAGCATCGTG CGCGCCCACA AGATGCAGCA GCTCAAGGAG CAGTACCGCG AGTCCTGGAT GCTGCACAAC AGCGGCTTCC GCAACTACAA CACCAGCATC GACGTGCGCA GACACGAGCT CTCAGATATC ACCGAGCTCC CGGAGAAATC CGACAAGGAC AGCTCGAGCG CCTACAACAC AGGCGAGAGC TGCCGCAGCA CCCCGCTCAC CCTGGAGATC TCCCCCGACA ACTCCTTGAG GAGAGCGGCG GAGGGCATCA GCTGCCCGAG CAGCGAAGGG GCTGTGGGGA CCACGGAAGC CTACGGGCCA GCCTCCAAGA ATCTGCTCTC CATCACGGAA GATCCCGAAG TGGGCACCCC TACCTATAGC CCGTCCCTGA AGGAGCTGGA CCCCAACCAG CCCCTGGAAA GCAAAGAGCG GAGAGCCAGC GACGGGAGCC GGAGCCCCAC GCCCAGCCAG AAGCTGGGCA GCGCCTACCT GCCCTCCTAT CACCACTCCC CATACAAGCA CGCGCACATC CCGGCGCACG CCCAGCACTA CCAGAGCTAC ATGCAGCTGA TCCAGCAGAA GTCGGCCGTG GAGTACGCGC AAAGCCAGAT GAGCCTGGTG AGCATGTGCA AGGACCTGAG CTCTCCCACC CCGTCGGAGC CGCGCATGGA GTGGAAGGTG AAGATCCGCA GCGACGGGAC GCGCTACATC ACCAAGAGGC CCGTGCGGGA CCGCCTGCTG CGGGAGCGCG CCCTGAAGAT CCGGGAAGAG CGCAGCGGCA TGACCACCGA CGACGACGCG GTGAGCGAGA TGAAGATGGG GCGCTACTGG AGCAAGGAGG AGAGGAAGCA GCACCTGGTG AAGGCCAAGG AGCAGCGGCG GCGGCGCGAG TTCATGATGC AGAGCAGGTT GGATTGTCTC AAGGAGCAGC AAGCAGCCGA TGACAGGAAG GAGATGAACA TTCTCGAACT GAGCCACAAA AAGATGATGA AGAAGAGGAA TAAGAAAATC TTCGATAACT GGATGACGAT CCAAGAACTC TTAACCCACG GCACAAAATC CCCGGACGGC ACTAGAGTAT ACAATTCCTT CCTATCGGTG ACTACTGTAT AA
The stop codons will be deleted if pcDNA3.1+ /C-(K)DYK vector is selected.
RefSeq
NP_001290071.1
CDS 289..2640
Translation
Target ORF information:
RefSeq Version NM_001303142.2
Organism Homo sapiens(human)
Definition Homo sapiens PDZ domain containing ring finger 3 (PDZRN3), transcript variant 5, mRNA.
Target ORF information:
Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+ /C-(K)DYK
NM_001303142.2
ORF Insert Sequence:
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021 1081 1141 1201 1261 1321 1381 1441 1501 1561 1621 1681 1741 1801 1861 1921 1981 2041 2101 2161 2221 2281 2341 ATGGGATGCA GTCTGTGCAG CCTGCAGAAG CAAGAGGAGC AGTACAAATT ACTCTATGAA GTTTGTCAGG TCAACGGCAG AGACTTATCC AGAGCAACTC ATGACCAGGC TGTGGAAGCT TTCAAGACAG CCAAGGAGCC CATAGTGGTG CAGGTGTTGA GAAGAACACC AAGGACCAAA ATGTTCACGC CTCCATCAGA GTCTCAGCTG GTGGACACGG GAACCCAAAC CGACATCACC TTTGAACATA TCATGGCCCT CACTAAGATG TCCTCTCCCA GCCCACCCGT GCTGGATCCC TATCTCTTGC CAGAGGAGCA TCCCTCAGCC CATGAATACT ACGATCCAAA TGACTACATT GGAGACATCC ATCAGGAGAT GGACAGGGAG GAGCTGGAGC TGGAGGAAGT GGACCTCTAC AGAATGAACA GCCAGGACAA GCTGGGCCTC ACTGTGTGCT ACCGGACGGA CGATGAAGAC GACATTGGGA TTTATATCAG TGAGATTGAC CCTAACAGCA TTGCAGCCAA GGATGGGCGC ATCCGAGAAG GAGACCGCAT TATCCAGATT AATGGGATAG AGGTGCAGAA CCGTGAAGAG GCTGTGGCTC TTCTAACCAG TGAAGAAAAT AAAAACTTTT CATTGCTGAT TGCAAGGCCT GAACTCCAGC TGGATGAGGG CTGGATGGAT GATGACAGGA ACGACTTTCT GGATGACCTG CACATGGACA TGCTGGAGGA GCAGCACCAC CAGGCCATGC AATTCACAGC TAGCGTGCTG CAGCAGAAGA AGCACGACGA AGACGGTGGG ACCACAGATA CAGCCACCAT CTTGTCCAAC CAGCACGAGA AGGACAGCGG TGTGGGGCGG ACCGACGAGA GCACCCGTAA TGACGAGAGC TCGGAGCAAG AGAACAATGG CGACGACGCC ACCGCATCCT CCAACCCGCT GGCGGGGCAG AGGAAGCTCA CCTGCAGCCA GGACACCTTG GGCAGCGGCG ACCTGCCCTT CAGCAACGAG TCTTTCATTT CGGCCGACTG CACGGACGCC GACTACCTGG GGATCCCGGT GGACGAGTGC GAGCGCTTCC GCGAGCTCCT GGAGCTCAAG TGCCAGGTGA AGAGCGCCAC CCCTTACGGC CTGTACTACC CTAGCGGCCC CCTGGACGCC GGCAAGAGTG ACCCTGAGAG CGTGGACAAG GAGCTGGAGC TGCTGAACGA AGAGCTGCGC AGCATCGAGC TGGAGTGCCT GAGCATCGTG CGCGCCCACA AGATGCAGCA GCTCAAGGAG CAGTACCGCG AGTCCTGGAT GCTGCACAAC AGCGGCTTCC GCAACTACAA CACCAGCATC GACGTGCGCA GACACGAGCT CTCAGATATC ACCGAGCTCC CGGAGAAATC CGACAAGGAC AGCTCGAGCG CCTACAACAC AGGCGAGAGC TGCCGCAGCA CCCCGCTCAC CCTGGAGATC TCCCCCGACA ACTCCTTGAG GAGAGCGGCG GAGGGCATCA GCTGCCCGAG CAGCGAAGGG GCTGTGGGGA CCACGGAAGC CTACGGGCCA GCCTCCAAGA ATCTGCTCTC CATCACGGAA GATCCCGAAG TGGGCACCCC TACCTATAGC CCGTCCCTGA AGGAGCTGGA CCCCAACCAG CCCCTGGAAA GCAAAGAGCG GAGAGCCAGC GACGGGAGCC GGAGCCCCAC GCCCAGCCAG AAGCTGGGCA GCGCCTACCT GCCCTCCTAT CACCACTCCC CATACAAGCA CGCGCACATC CCGGCGCACG CCCAGCACTA CCAGAGCTAC ATGCAGCTGA TCCAGCAGAA GTCGGCCGTG GAGTACGCGC AAAGCCAGAT GAGCCTGGTG AGCATGTGCA AGGACCTGAG CTCTCCCACC CCGTCGGAGC CGCGCATGGA GTGGAAGGTG AAGATCCGCA GCGACGGGAC GCGCTACATC ACCAAGAGGC CCGTGCGGGA CCGCCTGCTG CGGGAGCGCG CCCTGAAGAT CCGGGAAGAG CGCAGCGGCA TGACCACCGA CGACGACGCG GTGAGCGAGA TGAAGATGGG GCGCTACTGG AGCAAGGAGG AGAGGAAGCA GCACCTGGTG AAGGCCAAGG AGCAGCGGCG GCGGCGCGAG TTCATGATGC AGAGCAGGTT GGATTGTCTC AAGGAGCAGC AAGCAGCCGA TGACAGGAAG GAGATGAACA TTCTCGAACT GAGCCACAAA AAGATGATGA AGAAGAGGAA TAAGAAAATC TTCGATAACT GGATGACGAT CCAAGAACTC TTAACCCACG GCACAAAATC CCCGGACGGC ACTAGAGTAT ACAATTCCTT CCTATCGGTG ACTACTGTAT AA
The stop codons will be deleted if pcDNA3.1+ /C-(K)DYK vector is selected.
CloneID
OHu65306
Clone ID Related Accession (Same CDS sequence)
NM_001303141.1
Accession Version
NM_001303141.1 Latest version!
Documents for ORF clone product in default vector
Sequence Information
ORF Nucleotide Sequence (Length: 2367bp)
Protein sequence
SNP
Vector
pcDNA3.1+ /C-(K)DYK or customized vector
User Manual
Clone information
Clone Map
MSDS
Tag on pcDNA3.1+ /C-(K)DYK
C terminal DYKDDDDK tags
ORF Insert Method
CloneEZ™ Seamless cloning technology
Insert Structure
linear
Update Date
2019-12-27
Organism
Homo sapiens(human)
Product
E3 ubiquitin-protein ligase PDZRN3 isoform 4
Comment
Comment: REVIEWED REFSEQ: This record has been curated by NCBI staff. The reference sequence was derived from AK299275.1, AB029018.1 and AW661852.1.
Transcript Variant: This variant (4) lacks several exons and uses an alternate 5' terminal exon, compared to variant 1. These differences result in a distinct 5' UTR and cause translation initiation at an alternate downstream start codon, compared to variant 1. The resulting protein (isoform 4) has a distinct N-terminus and is shorter than isoform 1.
Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications.
##Evidence-Data-START##
Transcript exon combination :: AK316244.1, AK299275.1 [ECO:0000332]
RNAseq introns :: mixed/partial sample support SAMEA1965299, SAMEA1966682 [ECO:0000350]
##Evidence-Data-END##
COMPLETENESS: complete on the 3' end.
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021 1081 1141 1201 1261 1321 1381 1441 1501 1561 1621 1681 1741 1801 1861 1921 1981 2041 2101 2161 2221 2281 2341 ATGAAGATGG AACACAAGAG GATGATCTTA TTGTTCAGTA AATTTACTCT AATACATAAA CCCCATGGTG GAAGATGGTA TTTGGTCAAC GGCAGAGACT TATCCAGAGC AACTCATGAC CAGGCTGTGG AAGCTTTCAA GACAGCCAAG GAGCCCATAG TGGTGCAGGT GTTGAGAAGA ACACCAAGGA CCAAAATGTT CACGCCTCCA TCAGAGTCTC AGCTGGTGGA CACGGGAACC CAAACCGACA TCACCTTTGA ACATATCATG GCCCTCACTA AGATGTCCTC TCCCAGCCCA CCCGTGCTGG ATCCCTATCT CTTGCCAGAG GAGCATCCCT CAGCCCATGA ATACTACGAT CCAAATGACT ACATTGGAGA CATCCATCAG GAGATGGACA GGGAGGAGCT GGAGCTGGAG GAAGTGGACC TCTACAGAAT GAACAGCCAG GACAAGCTGG GCCTCACTGT GTGCTACCGG ACGGACGATG AAGACGACAT TGGGATTTAT ATCAGTGAGA TTGACCCTAA CAGCATTGCA GCCAAGGATG GGCGCATCCG AGAAGGAGAC CGCATTATCC AGATTAATGG GATAGAGGTG CAGAACCGTG AAGAGGCTGT GGCTCTTCTA ACCAGTGAAG AAAATAAAAA CTTTTCATTG CTGATTGCAA GGCCTGAACT CCAGCTGGAT GAGGGCTGGA TGGATGATGA CAGGAACGAC TTTCTGGATG ACCTGCACAT GGACATGCTG GAGGAGCAGC ACCACCAGGC CATGCAATTC ACAGCTAGCG TGCTGCAGCA GAAGAAGCAC GACGAAGACG GTGGGACCAC AGATACAGCC ACCATCTTGT CCAACCAGCA CGAGAAGGAC AGCGGTGTGG GGCGGACCGA CGAGAGCACC CGTAATGACG AGAGCTCGGA GCAAGAGAAC AATGGCGACG ACGCCACCGC ATCCTCCAAC CCGCTGGCGG GGCAGAGGAA GCTCACCTGC AGCCAGGACA CCTTGGGCAG CGGCGACCTG CCCTTCAGCA ACGAGTCTTT CATTTCGGCC GACTGCACGG ACGCCGACTA CCTGGGGATC CCGGTGGACG AGTGCGAGCG CTTCCGCGAG CTCCTGGAGC TCAAGTGCCA GGTGAAGAGC GCCACCCCTT ACGGCCTGTA CTACCCTAGC GGCCCCCTGG ACGCCGGCAA GAGTGACCCT GAGAGCGTGG ACAAGGAGCT GGAGCTGCTG AACGAAGAGC TGCGCAGCAT CGAGCTGGAG TGCCTGAGCA TCGTGCGCGC CCACAAGATG CAGCAGCTCA AGGAGCAGTA CCGCGAGTCC TGGATGCTGC ACAACAGCGG CTTCCGCAAC TACAACACCA GCATCGACGT GCGCAGACAC GAGCTCTCAG ATATCACCGA GCTCCCGGAG AAATCCGACA AGGACAGCTC GAGCGCCTAC AACACAGGCG AGAGCTGCCG CAGCACCCCG CTCACCCTGG AGATCTCCCC CGACAACTCC TTGAGGAGAG CGGCGGAGGG CATCAGCTGC CCGAGCAGCG AAGGGGCTGT GGGGACCACG GAAGCCTACG GGCCAGCCTC CAAGAATCTG CTCTCCATCA CGGAAGATCC CGAAGTGGGC ACCCCTACCT ATAGCCCGTC CCTGAAGGAG CTGGACCCCA ACCAGCCCCT GGAAAGCAAA GAGCGGAGAG CCAGCGACGG GAGCCGGAGC CCCACGCCCA GCCAGAAGCT GGGCAGCGCC TACCTGCCCT CCTATCACCA CTCCCCATAC AAGCACGCGC ACATCCCGGC GCACGCCCAG CACTACCAGA GCTACATGCA GCTGATCCAG CAGAAGTCGG CCGTGGAGTA CGCGCAAAGC CAGATGAGCC TGGTGAGCAT GTGCAAGGAC CTGAGCTCTC CCACCCCGTC GGAGCCGCGC ATGGAGTGGA AGGTGAAGAT CCGCAGCGAC GGGACGCGCT ACATCACCAA GAGGCCCGTG CGGGACCGCC TGCTGCGGGA GCGCGCCCTG AAGATCCGGG AAGAGCGCAG CGGCATGACC ACCGACGACG ACGCGGTGAG CGAGATGAAG ATGGGGCGCT ACTGGAGCAA GGAGGAGAGG AAGCAGCACC TGGTGAAGGC CAAGGAGCAG CGGCGGCGGC GCGAGTTCAT GATGCAGAGC AGGTTGGATT GTCTCAAGGA GCAGCAAGCA GCCGATGACA GGAAGGAGAT GAACATTCTC GAACTGAGCC ACAAAAAGAT GATGAAGAAG AGGAATAAGA AAATCTTCGA TAACTGGATG ACGATCCAAG AACTCTTAAC CCACGGCACA AAATCCCCGG ACGGCACTAG AGTATACAAT TCCTTCCTAT CGGTGACTAC TGTATAA
The stop codons will be deleted if pcDNA3.1+ /C-(K)DYK vector is selected.
RefSeq
NP_001290070.1
CDS 95..2461
Translation
Target ORF information:
RefSeq Version NM_001303141.1
Organism Homo sapiens(human)
Definition Homo sapiens PDZ domain containing ring finger 3 (PDZRN3), transcript variant 4, mRNA.
Target ORF information:
Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+ /C-(K)DYK
NM_001303141.1
ORF Insert Sequence:
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021 1081 1141 1201 1261 1321 1381 1441 1501 1561 1621 1681 1741 1801 1861 1921 1981 2041 2101 2161 2221 2281 2341 ATGAAGATGG AACACAAGAG GATGATCTTA TTGTTCAGTA AATTTACTCT AATACATAAA CCCCATGGTG GAAGATGGTA TTTGGTCAAC GGCAGAGACT TATCCAGAGC AACTCATGAC CAGGCTGTGG AAGCTTTCAA GACAGCCAAG GAGCCCATAG TGGTGCAGGT GTTGAGAAGA ACACCAAGGA CCAAAATGTT CACGCCTCCA TCAGAGTCTC AGCTGGTGGA CACGGGAACC CAAACCGACA TCACCTTTGA ACATATCATG GCCCTCACTA AGATGTCCTC TCCCAGCCCA CCCGTGCTGG ATCCCTATCT CTTGCCAGAG GAGCATCCCT CAGCCCATGA ATACTACGAT CCAAATGACT ACATTGGAGA CATCCATCAG GAGATGGACA GGGAGGAGCT GGAGCTGGAG GAAGTGGACC TCTACAGAAT GAACAGCCAG GACAAGCTGG GCCTCACTGT GTGCTACCGG ACGGACGATG AAGACGACAT TGGGATTTAT ATCAGTGAGA TTGACCCTAA CAGCATTGCA GCCAAGGATG GGCGCATCCG AGAAGGAGAC CGCATTATCC AGATTAATGG GATAGAGGTG CAGAACCGTG AAGAGGCTGT GGCTCTTCTA ACCAGTGAAG AAAATAAAAA CTTTTCATTG CTGATTGCAA GGCCTGAACT CCAGCTGGAT GAGGGCTGGA TGGATGATGA CAGGAACGAC TTTCTGGATG ACCTGCACAT GGACATGCTG GAGGAGCAGC ACCACCAGGC CATGCAATTC ACAGCTAGCG TGCTGCAGCA GAAGAAGCAC GACGAAGACG GTGGGACCAC AGATACAGCC ACCATCTTGT CCAACCAGCA CGAGAAGGAC AGCGGTGTGG GGCGGACCGA CGAGAGCACC CGTAATGACG AGAGCTCGGA GCAAGAGAAC AATGGCGACG ACGCCACCGC ATCCTCCAAC CCGCTGGCGG GGCAGAGGAA GCTCACCTGC AGCCAGGACA CCTTGGGCAG CGGCGACCTG CCCTTCAGCA ACGAGTCTTT CATTTCGGCC GACTGCACGG ACGCCGACTA CCTGGGGATC CCGGTGGACG AGTGCGAGCG CTTCCGCGAG CTCCTGGAGC TCAAGTGCCA GGTGAAGAGC GCCACCCCTT ACGGCCTGTA CTACCCTAGC GGCCCCCTGG ACGCCGGCAA GAGTGACCCT GAGAGCGTGG ACAAGGAGCT GGAGCTGCTG AACGAAGAGC TGCGCAGCAT CGAGCTGGAG TGCCTGAGCA TCGTGCGCGC CCACAAGATG CAGCAGCTCA AGGAGCAGTA CCGCGAGTCC TGGATGCTGC ACAACAGCGG CTTCCGCAAC TACAACACCA GCATCGACGT GCGCAGACAC GAGCTCTCAG ATATCACCGA GCTCCCGGAG AAATCCGACA AGGACAGCTC GAGCGCCTAC AACACAGGCG AGAGCTGCCG CAGCACCCCG CTCACCCTGG AGATCTCCCC CGACAACTCC TTGAGGAGAG CGGCGGAGGG CATCAGCTGC CCGAGCAGCG AAGGGGCTGT GGGGACCACG GAAGCCTACG GGCCAGCCTC CAAGAATCTG CTCTCCATCA CGGAAGATCC CGAAGTGGGC ACCCCTACCT ATAGCCCGTC CCTGAAGGAG CTGGACCCCA ACCAGCCCCT GGAAAGCAAA GAGCGGAGAG CCAGCGACGG GAGCCGGAGC CCCACGCCCA GCCAGAAGCT GGGCAGCGCC TACCTGCCCT CCTATCACCA CTCCCCATAC AAGCACGCGC ACATCCCGGC GCACGCCCAG CACTACCAGA GCTACATGCA GCTGATCCAG CAGAAGTCGG CCGTGGAGTA CGCGCAAAGC CAGATGAGCC TGGTGAGCAT GTGCAAGGAC CTGAGCTCTC CCACCCCGTC GGAGCCGCGC ATGGAGTGGA AGGTGAAGAT CCGCAGCGAC GGGACGCGCT ACATCACCAA GAGGCCCGTG CGGGACCGCC TGCTGCGGGA GCGCGCCCTG AAGATCCGGG AAGAGCGCAG CGGCATGACC ACCGACGACG ACGCGGTGAG CGAGATGAAG ATGGGGCGCT ACTGGAGCAA GGAGGAGAGG AAGCAGCACC TGGTGAAGGC CAAGGAGCAG CGGCGGCGGC GCGAGTTCAT GATGCAGAGC AGGTTGGATT GTCTCAAGGA GCAGCAAGCA GCCGATGACA GGAAGGAGAT GAACATTCTC GAACTGAGCC ACAAAAAGAT GATGAAGAAG AGGAATAAGA AAATCTTCGA TAACTGGATG ACGATCCAAG AACTCTTAAC CCACGGCACA AAATCCCCGG ACGGCACTAG AGTATACAAT TCCTTCCTAT CGGTGACTAC TGTATAA
The stop codons will be deleted if pcDNA3.1+ /C-(K)DYK vector is selected.
CloneID
OHu65307
Clone ID Related Accession (Same CDS sequence)
NM_001303139.1
Accession Version
NM_001303139.1 Latest version!
Documents for ORF clone product in default vector
Sequence Information
ORF Nucleotide Sequence (Length: 2295bp)
Protein sequence
SNP
Vector
pcDNA3.1+ /C-(K)DYK or customized vector
User Manual
Clone information
Clone Map
MSDS
Tag on pcDNA3.1+ /C-(K)DYK
C terminal DYKDDDDK tags
ORF Insert Method
CloneEZ™ Seamless cloning technology
Insert Structure
linear
Update Date
2019-12-27
Organism
Homo sapiens(human)
Product
E3 ubiquitin-protein ligase PDZRN3 isoform 2
Comment
Comment: REVIEWED REFSEQ: This record has been curated by NCBI staff. The reference sequence was derived from DC342349.1, AK307818.1, AB029018.1 and AW661852.1.
Transcript Variant: This variant (2) lacks several exons and uses an alternate 5' terminal exon, compared to variant 1. These differences result in a distinct 5' UTR and cause translation initiation at an alternate downstream start codon, compared to variant 1. The resulting protein (isoform 2) has a distinct N-terminus and is shorter than isoform 1.
Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications.
##Evidence-Data-START##
Transcript exon combination :: SRR1660809.193891.1, SRR1660809.226200.1 [ECO:0000332]
RNAseq introns :: mixed/partial sample support SAMEA1965299, SAMEA1966682 [ECO:0000350]
##Evidence-Data-END##
COMPLETENESS: complete on the 3' end.
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021 1081 1141 1201 1261 1321 1381 1441 1501 1561 1621 1681 1741 1801 1861 1921 1981 2041 2101 2161 2221 2281 ATGATTAACC AGGTCAACGG CAGAGACTTA TCCAGAGCAA CTCATGACCA GGCTGTGGAA GCTTTCAAGA CAGCCAAGGA GCCCATAGTG GTGCAGGTGT TGAGAAGAAC ACCAAGGACC AAAATGTTCA CGCCTCCATC AGAGTCTCAG CTGGTGGACA CGGGAACCCA AACCGACATC ACCTTTGAAC ATATCATGGC CCTCACTAAG ATGTCCTCTC CCAGCCCACC CGTGCTGGAT CCCTATCTCT TGCCAGAGGA GCATCCCTCA GCCCATGAAT ACTACGATCC AAATGACTAC ATTGGAGACA TCCATCAGGA GATGGACAGG GAGGAGCTGG AGCTGGAGGA AGTGGACCTC TACAGAATGA ACAGCCAGGA CAAGCTGGGC CTCACTGTGT GCTACCGGAC GGACGATGAA GACGACATTG GGATTTATAT CAGTGAGATT GACCCTAACA GCATTGCAGC CAAGGATGGG CGCATCCGAG AAGGAGACCG CATTATCCAG ATTAATGGGA TAGAGGTGCA GAACCGTGAA GAGGCTGTGG CTCTTCTAAC CAGTGAAGAA AATAAAAACT TTTCATTGCT GATTGCAAGG CCTGAACTCC AGCTGGATGA GGGCTGGATG GATGATGACA GGAACGACTT TCTGGATGAC CTGCACATGG ACATGCTGGA GGAGCAGCAC CACCAGGCCA TGCAATTCAC AGCTAGCGTG CTGCAGCAGA AGAAGCACGA CGAAGACGGT GGGACCACAG ATACAGCCAC CATCTTGTCC AACCAGCACG AGAAGGACAG CGGTGTGGGG CGGACCGACG AGAGCACCCG TAATGACGAG AGCTCGGAGC AAGAGAACAA TGGCGACGAC GCCACCGCAT CCTCCAACCC GCTGGCGGGG CAGAGGAAGC TCACCTGCAG CCAGGACACC TTGGGCAGCG GCGACCTGCC CTTCAGCAAC GAGTCTTTCA TTTCGGCCGA CTGCACGGAC GCCGACTACC TGGGGATCCC GGTGGACGAG TGCGAGCGCT TCCGCGAGCT CCTGGAGCTC AAGTGCCAGG TGAAGAGCGC CACCCCTTAC GGCCTGTACT ACCCTAGCGG CCCCCTGGAC GCCGGCAAGA GTGACCCTGA GAGCGTGGAC AAGGAGCTGG AGCTGCTGAA CGAAGAGCTG CGCAGCATCG AGCTGGAGTG CCTGAGCATC GTGCGCGCCC ACAAGATGCA GCAGCTCAAG GAGCAGTACC GCGAGTCCTG GATGCTGCAC AACAGCGGCT TCCGCAACTA CAACACCAGC ATCGACGTGC GCAGACACGA GCTCTCAGAT ATCACCGAGC TCCCGGAGAA ATCCGACAAG GACAGCTCGA GCGCCTACAA CACAGGCGAG AGCTGCCGCA GCACCCCGCT CACCCTGGAG ATCTCCCCCG ACAACTCCTT GAGGAGAGCG GCGGAGGGCA TCAGCTGCCC GAGCAGCGAA GGGGCTGTGG GGACCACGGA AGCCTACGGG CCAGCCTCCA AGAATCTGCT CTCCATCACG GAAGATCCCG AAGTGGGCAC CCCTACCTAT AGCCCGTCCC TGAAGGAGCT GGACCCCAAC CAGCCCCTGG AAAGCAAAGA GCGGAGAGCC AGCGACGGGA GCCGGAGCCC CACGCCCAGC CAGAAGCTGG GCAGCGCCTA CCTGCCCTCC TATCACCACT CCCCATACAA GCACGCGCAC ATCCCGGCGC ACGCCCAGCA CTACCAGAGC TACATGCAGC TGATCCAGCA GAAGTCGGCC GTGGAGTACG CGCAAAGCCA GATGAGCCTG GTGAGCATGT GCAAGGACCT GAGCTCTCCC ACCCCGTCGG AGCCGCGCAT GGAGTGGAAG GTGAAGATCC GCAGCGACGG GACGCGCTAC ATCACCAAGA GGCCCGTGCG GGACCGCCTG CTGCGGGAGC GCGCCCTGAA GATCCGGGAA GAGCGCAGCG GCATGACCAC CGACGACGAC GCGGTGAGCG AGATGAAGAT GGGGCGCTAC TGGAGCAAGG AGGAGAGGAA GCAGCACCTG GTGAAGGCCA AGGAGCAGCG GCGGCGGCGC GAGTTCATGA TGCAGAGCAG GTTGGATTGT CTCAAGGAGC AGCAAGCAGC CGATGACAGG AAGGAGATGA ACATTCTCGA ACTGAGCCAC AAAAAGATGA TGAAGAAGAG GAATAAGAAA ATCTTCGATA ACTGGATGAC GATCCAAGAA CTCTTAACCC ACGGCACAAA ATCCCCGGAC GGCACTAGAG TATACAATTC CTTCCTATCG GTGACTACTG TATAA
The stop codons will be deleted if pcDNA3.1+ /C-(K)DYK vector is selected.
RefSeq
NP_001290068.1
CDS 354..2648
Translation
Target ORF information:
RefSeq Version NM_001303139.1
Organism Homo sapiens(human)
Definition Homo sapiens PDZ domain containing ring finger 3 (PDZRN3), transcript variant 2, mRNA.
Target ORF information:
Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+ /C-(K)DYK
NM_001303139.1
ORF Insert Sequence:
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021 1081 1141 1201 1261 1321 1381 1441 1501 1561 1621 1681 1741 1801 1861 1921 1981 2041 2101 2161 2221 2281 ATGATTAACC AGGTCAACGG CAGAGACTTA TCCAGAGCAA CTCATGACCA GGCTGTGGAA GCTTTCAAGA CAGCCAAGGA GCCCATAGTG GTGCAGGTGT TGAGAAGAAC ACCAAGGACC AAAATGTTCA CGCCTCCATC AGAGTCTCAG CTGGTGGACA CGGGAACCCA AACCGACATC ACCTTTGAAC ATATCATGGC CCTCACTAAG ATGTCCTCTC CCAGCCCACC CGTGCTGGAT CCCTATCTCT TGCCAGAGGA GCATCCCTCA GCCCATGAAT ACTACGATCC AAATGACTAC ATTGGAGACA TCCATCAGGA GATGGACAGG GAGGAGCTGG AGCTGGAGGA AGTGGACCTC TACAGAATGA ACAGCCAGGA CAAGCTGGGC CTCACTGTGT GCTACCGGAC GGACGATGAA GACGACATTG GGATTTATAT CAGTGAGATT GACCCTAACA GCATTGCAGC CAAGGATGGG CGCATCCGAG AAGGAGACCG CATTATCCAG ATTAATGGGA TAGAGGTGCA GAACCGTGAA GAGGCTGTGG CTCTTCTAAC CAGTGAAGAA AATAAAAACT TTTCATTGCT GATTGCAAGG CCTGAACTCC AGCTGGATGA GGGCTGGATG GATGATGACA GGAACGACTT TCTGGATGAC CTGCACATGG ACATGCTGGA GGAGCAGCAC CACCAGGCCA TGCAATTCAC AGCTAGCGTG CTGCAGCAGA AGAAGCACGA CGAAGACGGT GGGACCACAG ATACAGCCAC CATCTTGTCC AACCAGCACG AGAAGGACAG CGGTGTGGGG CGGACCGACG AGAGCACCCG TAATGACGAG AGCTCGGAGC AAGAGAACAA TGGCGACGAC GCCACCGCAT CCTCCAACCC GCTGGCGGGG CAGAGGAAGC TCACCTGCAG CCAGGACACC TTGGGCAGCG GCGACCTGCC CTTCAGCAAC GAGTCTTTCA TTTCGGCCGA CTGCACGGAC GCCGACTACC TGGGGATCCC GGTGGACGAG TGCGAGCGCT TCCGCGAGCT CCTGGAGCTC AAGTGCCAGG TGAAGAGCGC CACCCCTTAC GGCCTGTACT ACCCTAGCGG CCCCCTGGAC GCCGGCAAGA GTGACCCTGA GAGCGTGGAC AAGGAGCTGG AGCTGCTGAA CGAAGAGCTG CGCAGCATCG AGCTGGAGTG CCTGAGCATC GTGCGCGCCC ACAAGATGCA GCAGCTCAAG GAGCAGTACC GCGAGTCCTG GATGCTGCAC AACAGCGGCT TCCGCAACTA CAACACCAGC ATCGACGTGC GCAGACACGA GCTCTCAGAT ATCACCGAGC TCCCGGAGAA ATCCGACAAG GACAGCTCGA GCGCCTACAA CACAGGCGAG AGCTGCCGCA GCACCCCGCT CACCCTGGAG ATCTCCCCCG ACAACTCCTT GAGGAGAGCG GCGGAGGGCA TCAGCTGCCC GAGCAGCGAA GGGGCTGTGG GGACCACGGA AGCCTACGGG CCAGCCTCCA AGAATCTGCT CTCCATCACG GAAGATCCCG AAGTGGGCAC CCCTACCTAT AGCCCGTCCC TGAAGGAGCT GGACCCCAAC CAGCCCCTGG AAAGCAAAGA GCGGAGAGCC AGCGACGGGA GCCGGAGCCC CACGCCCAGC CAGAAGCTGG GCAGCGCCTA CCTGCCCTCC TATCACCACT CCCCATACAA GCACGCGCAC ATCCCGGCGC ACGCCCAGCA CTACCAGAGC TACATGCAGC TGATCCAGCA GAAGTCGGCC GTGGAGTACG CGCAAAGCCA GATGAGCCTG GTGAGCATGT GCAAGGACCT GAGCTCTCCC ACCCCGTCGG AGCCGCGCAT GGAGTGGAAG GTGAAGATCC GCAGCGACGG GACGCGCTAC ATCACCAAGA GGCCCGTGCG GGACCGCCTG CTGCGGGAGC GCGCCCTGAA GATCCGGGAA GAGCGCAGCG GCATGACCAC CGACGACGAC GCGGTGAGCG AGATGAAGAT GGGGCGCTAC TGGAGCAAGG AGGAGAGGAA GCAGCACCTG GTGAAGGCCA AGGAGCAGCG GCGGCGGCGC GAGTTCATGA TGCAGAGCAG GTTGGATTGT CTCAAGGAGC AGCAAGCAGC CGATGACAGG AAGGAGATGA ACATTCTCGA ACTGAGCCAC AAAAAGATGA TGAAGAAGAG GAATAAGAAA ATCTTCGATA ACTGGATGAC GATCCAAGAA CTCTTAACCC ACGGCACAAA ATCCCCGGAC GGCACTAGAG TATACAATTC CTTCCTATCG GTGACTACTG TATAA
The stop codons will be deleted if pcDNA3.1+ /C-(K)DYK vector is selected.
CloneID
OHu65308
Clone ID Related Accession (Same CDS sequence)
NM_001303140.1
, NM_001303140.2
Accession Version
NM_001303140.1
Documents for ORF clone product in default vector
Sequence Information
ORF Nucleotide Sequence (Length: 2172bp)
Protein sequence
SNP
Vector
pcDNA3.1+ /C-(K)DYK or customized vector
User Manual
Clone information
Clone Map
MSDS
Tag on pcDNA3.1+ /C-(K)DYK
C terminal DYKDDDDK tags
ORF Insert Method
CloneEZ™ Seamless cloning technology
Insert Structure
linear
Update Date
2018-12-03
Organism
Homo sapiens(human)
Product
E3 ubiquitin-protein ligase PDZRN3 isoform 3
Comment
Comment: REVIEWED REFSEQ: This record has been curated by NCBI staff. The reference sequence was derived from DC412278.1, AK294761.1, AB029018.1 and AW661852.1.
Transcript Variant: This variant (3) lacks several exons and uses an alternate 5' terminal exon, compared to variant 1. These differences result in a distinct 5' UTR and cause translation initiation at an in-frame downstream start codon, compared to variant 1. The resulting protein (isoform 3) has a shorter N-terminus compared to isoform 1.
Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications.
##Evidence-Data-START##
Transcript exon combination :: SRR1803612.51050.1, SRR1803616.278185.1 [ECO:0000332]
RNAseq introns :: mixed/partial sample support SAMEA1965299, SAMEA1966682 [ECO:0000350]
##Evidence-Data-END##
COMPLETENESS: complete on the 3' end.
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021 1081 1141 1201 1261 1321 1381 1441 1501 1561 1621 1681 1741 1801 1861 1921 1981 2041 2101 2161 ATGTTCACGC CTCCATCAGA GTCTCAGCTG GTGGACACGG GAACCCAAAC CGACATCACC TTTGAACATA TCATGGCCCT CACTAAGATG TCCTCTCCCA GCCCACCCGT GCTGGATCCC TATCTCTTGC CAGAGGAGCA TCCCTCAGCC CATGAATACT ACGATCCAAA TGACTACATT GGAGACATCC ATCAGGAGAT GGACAGGGAG GAGCTGGAGC TGGAGGAAGT GGACCTCTAC AGAATGAACA GCCAGGACAA GCTGGGCCTC ACTGTGTGCT ACCGGACGGA CGATGAAGAC GACATTGGGA TTTATATCAG TGAGATTGAC CCTAACAGCA TTGCAGCCAA GGATGGGCGC ATCCGAGAAG GAGACCGCAT TATCCAGATT AATGGGATAG AGGTGCAGAA CCGTGAAGAG GCTGTGGCTC TTCTAACCAG TGAAGAAAAT AAAAACTTTT CATTGCTGAT TGCAAGGCCT GAACTCCAGC TGGATGAGGG CTGGATGGAT GATGACAGGA ACGACTTTCT GGATGACCTG CACATGGACA TGCTGGAGGA GCAGCACCAC CAGGCCATGC AATTCACAGC TAGCGTGCTG CAGCAGAAGA AGCACGACGA AGACGGTGGG ACCACAGATA CAGCCACCAT CTTGTCCAAC CAGCACGAGA AGGACAGCGG TGTGGGGCGG ACCGACGAGA GCACCCGTAA TGACGAGAGC TCGGAGCAAG AGAACAATGG CGACGACGCC ACCGCATCCT CCAACCCGCT GGCGGGGCAG AGGAAGCTCA CCTGCAGCCA GGACACCTTG GGCAGCGGCG ACCTGCCCTT CAGCAACGAG TCTTTCATTT CGGCCGACTG CACGGACGCC GACTACCTGG GGATCCCGGT GGACGAGTGC GAGCGCTTCC GCGAGCTCCT GGAGCTCAAG TGCCAGGTGA AGAGCGCCAC CCCTTACGGC CTGTACTACC CTAGCGGCCC CCTGGACGCC GGCAAGAGTG ACCCTGAGAG CGTGGACAAG GAGCTGGAGC TGCTGAACGA AGAGCTGCGC AGCATCGAGC TGGAGTGCCT GAGCATCGTG CGCGCCCACA AGATGCAGCA GCTCAAGGAG CAGTACCGCG AGTCCTGGAT GCTGCACAAC AGCGGCTTCC GCAACTACAA CACCAGCATC GACGTGCGCA GACACGAGCT CTCAGATATC ACCGAGCTCC CGGAGAAATC CGACAAGGAC AGCTCGAGCG CCTACAACAC AGGCGAGAGC TGCCGCAGCA CCCCGCTCAC CCTGGAGATC TCCCCCGACA ACTCCTTGAG GAGAGCGGCG GAGGGCATCA GCTGCCCGAG CAGCGAAGGG GCTGTGGGGA CCACGGAAGC CTACGGGCCA GCCTCCAAGA ATCTGCTCTC CATCACGGAA GATCCCGAAG TGGGCACCCC TACCTATAGC CCGTCCCTGA AGGAGCTGGA CCCCAACCAG CCCCTGGAAA GCAAAGAGCG GAGAGCCAGC GACGGGAGCC GGAGCCCCAC GCCCAGCCAG AAGCTGGGCA GCGCCTACCT GCCCTCCTAT CACCACTCCC CATACAAGCA CGCGCACATC CCGGCGCACG CCCAGCACTA CCAGAGCTAC ATGCAGCTGA TCCAGCAGAA GTCGGCCGTG GAGTACGCGC AAAGCCAGAT GAGCCTGGTG AGCATGTGCA AGGACCTGAG CTCTCCCACC CCGTCGGAGC CGCGCATGGA GTGGAAGGTG AAGATCCGCA GCGACGGGAC GCGCTACATC ACCAAGAGGC CCGTGCGGGA CCGCCTGCTG CGGGAGCGCG CCCTGAAGAT CCGGGAAGAG CGCAGCGGCA TGACCACCGA CGACGACGCG GTGAGCGAGA TGAAGATGGG GCGCTACTGG AGCAAGGAGG AGAGGAAGCA GCACCTGGTG AAGGCCAAGG AGCAGCGGCG GCGGCGCGAG TTCATGATGC AGAGCAGGTT GGATTGTCTC AAGGAGCAGC AAGCAGCCGA TGACAGGAAG GAGATGAACA TTCTCGAACT GAGCCACAAA AAGATGATGA AGAAGAGGAA TAAGAAAATC TTCGATAACT GGATGACGAT CCAAGAACTC TTAACCCACG GCACAAAATC CCCGGACGGC ACTAGAGTAT ACAATTCCTT CCTATCGGTG ACTACTGTAT AA
The stop codons will be deleted if pcDNA3.1+ /C-(K)DYK vector is selected.
RefSeq
NP_001290069.1
CDS 340..2511
Translation
Target ORF information:
RefSeq Version NM_001303140.1
Organism Homo sapiens(human)
Definition Homo sapiens PDZ domain containing ring finger 3 (PDZRN3), transcript variant 3, mRNA.
Target ORF information:
Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+ /C-(K)DYK
NM_001303140.1
ORF Insert Sequence:
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021 1081 1141 1201 1261 1321 1381 1441 1501 1561 1621 1681 1741 1801 1861 1921 1981 2041 2101 2161 ATGTTCACGC CTCCATCAGA GTCTCAGCTG GTGGACACGG GAACCCAAAC CGACATCACC TTTGAACATA TCATGGCCCT CACTAAGATG TCCTCTCCCA GCCCACCCGT GCTGGATCCC TATCTCTTGC CAGAGGAGCA TCCCTCAGCC CATGAATACT ACGATCCAAA TGACTACATT GGAGACATCC ATCAGGAGAT GGACAGGGAG GAGCTGGAGC TGGAGGAAGT GGACCTCTAC AGAATGAACA GCCAGGACAA GCTGGGCCTC ACTGTGTGCT ACCGGACGGA CGATGAAGAC GACATTGGGA TTTATATCAG TGAGATTGAC CCTAACAGCA TTGCAGCCAA GGATGGGCGC ATCCGAGAAG GAGACCGCAT TATCCAGATT AATGGGATAG AGGTGCAGAA CCGTGAAGAG GCTGTGGCTC TTCTAACCAG TGAAGAAAAT AAAAACTTTT CATTGCTGAT TGCAAGGCCT GAACTCCAGC TGGATGAGGG CTGGATGGAT GATGACAGGA ACGACTTTCT GGATGACCTG CACATGGACA TGCTGGAGGA GCAGCACCAC CAGGCCATGC AATTCACAGC TAGCGTGCTG CAGCAGAAGA AGCACGACGA AGACGGTGGG ACCACAGATA CAGCCACCAT CTTGTCCAAC CAGCACGAGA AGGACAGCGG TGTGGGGCGG ACCGACGAGA GCACCCGTAA TGACGAGAGC TCGGAGCAAG AGAACAATGG CGACGACGCC ACCGCATCCT CCAACCCGCT GGCGGGGCAG AGGAAGCTCA CCTGCAGCCA GGACACCTTG GGCAGCGGCG ACCTGCCCTT CAGCAACGAG TCTTTCATTT CGGCCGACTG CACGGACGCC GACTACCTGG GGATCCCGGT GGACGAGTGC GAGCGCTTCC GCGAGCTCCT GGAGCTCAAG TGCCAGGTGA AGAGCGCCAC CCCTTACGGC CTGTACTACC CTAGCGGCCC CCTGGACGCC GGCAAGAGTG ACCCTGAGAG CGTGGACAAG GAGCTGGAGC TGCTGAACGA AGAGCTGCGC AGCATCGAGC TGGAGTGCCT GAGCATCGTG CGCGCCCACA AGATGCAGCA GCTCAAGGAG CAGTACCGCG AGTCCTGGAT GCTGCACAAC AGCGGCTTCC GCAACTACAA CACCAGCATC GACGTGCGCA GACACGAGCT CTCAGATATC ACCGAGCTCC CGGAGAAATC CGACAAGGAC AGCTCGAGCG CCTACAACAC AGGCGAGAGC TGCCGCAGCA CCCCGCTCAC CCTGGAGATC TCCCCCGACA ACTCCTTGAG GAGAGCGGCG GAGGGCATCA GCTGCCCGAG CAGCGAAGGG GCTGTGGGGA CCACGGAAGC CTACGGGCCA GCCTCCAAGA ATCTGCTCTC CATCACGGAA GATCCCGAAG TGGGCACCCC TACCTATAGC CCGTCCCTGA AGGAGCTGGA CCCCAACCAG CCCCTGGAAA GCAAAGAGCG GAGAGCCAGC GACGGGAGCC GGAGCCCCAC GCCCAGCCAG AAGCTGGGCA GCGCCTACCT GCCCTCCTAT CACCACTCCC CATACAAGCA CGCGCACATC CCGGCGCACG CCCAGCACTA CCAGAGCTAC ATGCAGCTGA TCCAGCAGAA GTCGGCCGTG GAGTACGCGC AAAGCCAGAT GAGCCTGGTG AGCATGTGCA AGGACCTGAG CTCTCCCACC CCGTCGGAGC CGCGCATGGA GTGGAAGGTG AAGATCCGCA GCGACGGGAC GCGCTACATC ACCAAGAGGC CCGTGCGGGA CCGCCTGCTG CGGGAGCGCG CCCTGAAGAT CCGGGAAGAG CGCAGCGGCA TGACCACCGA CGACGACGCG GTGAGCGAGA TGAAGATGGG GCGCTACTGG AGCAAGGAGG AGAGGAAGCA GCACCTGGTG AAGGCCAAGG AGCAGCGGCG GCGGCGCGAG TTCATGATGC AGAGCAGGTT GGATTGTCTC AAGGAGCAGC AAGCAGCCGA TGACAGGAAG GAGATGAACA TTCTCGAACT GAGCCACAAA AAGATGATGA AGAAGAGGAA TAAGAAAATC TTCGATAACT GGATGACGAT CCAAGAACTC TTAACCCACG GCACAAAATC CCCGGACGGC ACTAGAGTAT ACAATTCCTT CCTATCGGTG ACTACTGTAT AA
The stop codons will be deleted if pcDNA3.1+ /C-(K)DYK vector is selected.
CloneID
OHu65308
Clone ID Related Accession (Same CDS sequence)
NM_001303140.1
, NM_001303140.2
Accession Version
NM_001303140.2 Latest version!
Documents for ORF clone product in default vector
Sequence Information
ORF Nucleotide Sequence (Length: 2172bp)
Protein sequence
SNP
Vector
pcDNA3.1+ /C-(K)DYK or customized vector
User Manual
Clone information
Clone Map
MSDS
Tag on pcDNA3.1+ /C-(K)DYK
C terminal DYKDDDDK tags
ORF Insert Method
CloneEZ™ Seamless cloning technology
Insert Structure
linear
Update Date
2020-01-03
Organism
Homo sapiens(human)
Product
E3 ubiquitin-protein ligase PDZRN3 isoform 3
Comment
Comment: REVIEWED REFSEQ: This record has been curated by NCBI staff. The reference sequence was derived from AK294761.1, AB029018.1 and AW661852.1. On May 31, 2019 this sequence version replaced NM_001303140.1.
Transcript Variant: This variant (3) lacks several exons and uses an alternate 5' terminal exon, compared to variant 1. These differences result in a distinct 5' UTR and cause translation initiation at an in-frame downstream start codon, compared to variant 1. The resulting protein (isoform 3) has a shorter N-terminus compared to isoform 1.
Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications.
##Evidence-Data-START##
Transcript exon combination :: SRR1660805.5775.1, SRR1660809.255331.1 [ECO:0000332]
RNAseq introns :: mixed/partial sample support SAMEA1965299, SAMEA1966682 [ECO:0000350]
##Evidence-Data-END##
COMPLETENESS: complete on the 3' end.
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021 1081 1141 1201 1261 1321 1381 1441 1501 1561 1621 1681 1741 1801 1861 1921 1981 2041 2101 2161 ATGTTCACGC CTCCATCAGA GTCTCAGCTG GTGGACACGG GAACCCAAAC CGACATCACC TTTGAACATA TCATGGCCCT CACTAAGATG TCCTCTCCCA GCCCACCCGT GCTGGATCCC TATCTCTTGC CAGAGGAGCA TCCCTCAGCC CATGAATACT ACGATCCAAA TGACTACATT GGAGACATCC ATCAGGAGAT GGACAGGGAG GAGCTGGAGC TGGAGGAAGT GGACCTCTAC AGAATGAACA GCCAGGACAA GCTGGGCCTC ACTGTGTGCT ACCGGACGGA CGATGAAGAC GACATTGGGA TTTATATCAG TGAGATTGAC CCTAACAGCA TTGCAGCCAA GGATGGGCGC ATCCGAGAAG GAGACCGCAT TATCCAGATT AATGGGATAG AGGTGCAGAA CCGTGAAGAG GCTGTGGCTC TTCTAACCAG TGAAGAAAAT AAAAACTTTT CATTGCTGAT TGCAAGGCCT GAACTCCAGC TGGATGAGGG CTGGATGGAT GATGACAGGA ACGACTTTCT GGATGACCTG CACATGGACA TGCTGGAGGA GCAGCACCAC CAGGCCATGC AATTCACAGC TAGCGTGCTG CAGCAGAAGA AGCACGACGA AGACGGTGGG ACCACAGATA CAGCCACCAT CTTGTCCAAC CAGCACGAGA AGGACAGCGG TGTGGGGCGG ACCGACGAGA GCACCCGTAA TGACGAGAGC TCGGAGCAAG AGAACAATGG CGACGACGCC ACCGCATCCT CCAACCCGCT GGCGGGGCAG AGGAAGCTCA CCTGCAGCCA GGACACCTTG GGCAGCGGCG ACCTGCCCTT CAGCAACGAG TCTTTCATTT CGGCCGACTG CACGGACGCC GACTACCTGG GGATCCCGGT GGACGAGTGC GAGCGCTTCC GCGAGCTCCT GGAGCTCAAG TGCCAGGTGA AGAGCGCCAC CCCTTACGGC CTGTACTACC CTAGCGGCCC CCTGGACGCC GGCAAGAGTG ACCCTGAGAG CGTGGACAAG GAGCTGGAGC TGCTGAACGA AGAGCTGCGC AGCATCGAGC TGGAGTGCCT GAGCATCGTG CGCGCCCACA AGATGCAGCA GCTCAAGGAG CAGTACCGCG AGTCCTGGAT GCTGCACAAC AGCGGCTTCC GCAACTACAA CACCAGCATC GACGTGCGCA GACACGAGCT CTCAGATATC ACCGAGCTCC CGGAGAAATC CGACAAGGAC AGCTCGAGCG CCTACAACAC AGGCGAGAGC TGCCGCAGCA CCCCGCTCAC CCTGGAGATC TCCCCCGACA ACTCCTTGAG GAGAGCGGCG GAGGGCATCA GCTGCCCGAG CAGCGAAGGG GCTGTGGGGA CCACGGAAGC CTACGGGCCA GCCTCCAAGA ATCTGCTCTC CATCACGGAA GATCCCGAAG TGGGCACCCC TACCTATAGC CCGTCCCTGA AGGAGCTGGA CCCCAACCAG CCCCTGGAAA GCAAAGAGCG GAGAGCCAGC GACGGGAGCC GGAGCCCCAC GCCCAGCCAG AAGCTGGGCA GCGCCTACCT GCCCTCCTAT CACCACTCCC CATACAAGCA CGCGCACATC CCGGCGCACG CCCAGCACTA CCAGAGCTAC ATGCAGCTGA TCCAGCAGAA GTCGGCCGTG GAGTACGCGC AAAGCCAGAT GAGCCTGGTG AGCATGTGCA AGGACCTGAG CTCTCCCACC CCGTCGGAGC CGCGCATGGA GTGGAAGGTG AAGATCCGCA GCGACGGGAC GCGCTACATC ACCAAGAGGC CCGTGCGGGA CCGCCTGCTG CGGGAGCGCG CCCTGAAGAT CCGGGAAGAG CGCAGCGGCA TGACCACCGA CGACGACGCG GTGAGCGAGA TGAAGATGGG GCGCTACTGG AGCAAGGAGG AGAGGAAGCA GCACCTGGTG AAGGCCAAGG AGCAGCGGCG GCGGCGCGAG TTCATGATGC AGAGCAGGTT GGATTGTCTC AAGGAGCAGC AAGCAGCCGA TGACAGGAAG GAGATGAACA TTCTCGAACT GAGCCACAAA AAGATGATGA AGAAGAGGAA TAAGAAAATC TTCGATAACT GGATGACGAT CCAAGAACTC TTAACCCACG GCACAAAATC CCCGGACGGC ACTAGAGTAT ACAATTCCTT CCTATCGGTG ACTACTGTAT AA
The stop codons will be deleted if pcDNA3.1+ /C-(K)DYK vector is selected.
RefSeq
NP_001290069.1
CDS 242..2413
Translation
Target ORF information:
RefSeq Version NM_001303140.2
Organism Homo sapiens(human)
Definition Homo sapiens PDZ domain containing ring finger 3 (PDZRN3), transcript variant 3, mRNA.
Target ORF information:
Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+ /C-(K)DYK
NM_001303140.2
ORF Insert Sequence:
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021 1081 1141 1201 1261 1321 1381 1441 1501 1561 1621 1681 1741 1801 1861 1921 1981 2041 2101 2161 ATGTTCACGC CTCCATCAGA GTCTCAGCTG GTGGACACGG GAACCCAAAC CGACATCACC TTTGAACATA TCATGGCCCT CACTAAGATG TCCTCTCCCA GCCCACCCGT GCTGGATCCC TATCTCTTGC CAGAGGAGCA TCCCTCAGCC CATGAATACT ACGATCCAAA TGACTACATT GGAGACATCC ATCAGGAGAT GGACAGGGAG GAGCTGGAGC TGGAGGAAGT GGACCTCTAC AGAATGAACA GCCAGGACAA GCTGGGCCTC ACTGTGTGCT ACCGGACGGA CGATGAAGAC GACATTGGGA TTTATATCAG TGAGATTGAC CCTAACAGCA TTGCAGCCAA GGATGGGCGC ATCCGAGAAG GAGACCGCAT TATCCAGATT AATGGGATAG AGGTGCAGAA CCGTGAAGAG GCTGTGGCTC TTCTAACCAG TGAAGAAAAT AAAAACTTTT CATTGCTGAT TGCAAGGCCT GAACTCCAGC TGGATGAGGG CTGGATGGAT GATGACAGGA ACGACTTTCT GGATGACCTG CACATGGACA TGCTGGAGGA GCAGCACCAC CAGGCCATGC AATTCACAGC TAGCGTGCTG CAGCAGAAGA AGCACGACGA AGACGGTGGG ACCACAGATA CAGCCACCAT CTTGTCCAAC CAGCACGAGA AGGACAGCGG TGTGGGGCGG ACCGACGAGA GCACCCGTAA TGACGAGAGC TCGGAGCAAG AGAACAATGG CGACGACGCC ACCGCATCCT CCAACCCGCT GGCGGGGCAG AGGAAGCTCA CCTGCAGCCA GGACACCTTG GGCAGCGGCG ACCTGCCCTT CAGCAACGAG TCTTTCATTT CGGCCGACTG CACGGACGCC GACTACCTGG GGATCCCGGT GGACGAGTGC GAGCGCTTCC GCGAGCTCCT GGAGCTCAAG TGCCAGGTGA AGAGCGCCAC CCCTTACGGC CTGTACTACC CTAGCGGCCC CCTGGACGCC GGCAAGAGTG ACCCTGAGAG CGTGGACAAG GAGCTGGAGC TGCTGAACGA AGAGCTGCGC AGCATCGAGC TGGAGTGCCT GAGCATCGTG CGCGCCCACA AGATGCAGCA GCTCAAGGAG CAGTACCGCG AGTCCTGGAT GCTGCACAAC AGCGGCTTCC GCAACTACAA CACCAGCATC GACGTGCGCA GACACGAGCT CTCAGATATC ACCGAGCTCC CGGAGAAATC CGACAAGGAC AGCTCGAGCG CCTACAACAC AGGCGAGAGC TGCCGCAGCA CCCCGCTCAC CCTGGAGATC TCCCCCGACA ACTCCTTGAG GAGAGCGGCG GAGGGCATCA GCTGCCCGAG CAGCGAAGGG GCTGTGGGGA CCACGGAAGC CTACGGGCCA GCCTCCAAGA ATCTGCTCTC CATCACGGAA GATCCCGAAG TGGGCACCCC TACCTATAGC CCGTCCCTGA AGGAGCTGGA CCCCAACCAG CCCCTGGAAA GCAAAGAGCG GAGAGCCAGC GACGGGAGCC GGAGCCCCAC GCCCAGCCAG AAGCTGGGCA GCGCCTACCT GCCCTCCTAT CACCACTCCC CATACAAGCA CGCGCACATC CCGGCGCACG CCCAGCACTA CCAGAGCTAC ATGCAGCTGA TCCAGCAGAA GTCGGCCGTG GAGTACGCGC AAAGCCAGAT GAGCCTGGTG AGCATGTGCA AGGACCTGAG CTCTCCCACC CCGTCGGAGC CGCGCATGGA GTGGAAGGTG AAGATCCGCA GCGACGGGAC GCGCTACATC ACCAAGAGGC CCGTGCGGGA CCGCCTGCTG CGGGAGCGCG CCCTGAAGAT CCGGGAAGAG CGCAGCGGCA TGACCACCGA CGACGACGCG GTGAGCGAGA TGAAGATGGG GCGCTACTGG AGCAAGGAGG AGAGGAAGCA GCACCTGGTG AAGGCCAAGG AGCAGCGGCG GCGGCGCGAG TTCATGATGC AGAGCAGGTT GGATTGTCTC AAGGAGCAGC AAGCAGCCGA TGACAGGAAG GAGATGAACA TTCTCGAACT GAGCCACAAA AAGATGATGA AGAAGAGGAA TAAGAAAATC TTCGATAACT GGATGACGAT CCAAGAACTC TTAACCCACG GCACAAAATC CCCGGACGGC ACTAGAGTAT ACAATTCCTT CCTATCGGTG ACTACTGTAT AA
The stop codons will be deleted if pcDNA3.1+ /C-(K)DYK vector is selected.
CloneID
OHu93907
Clone ID Related Accession (Same CDS sequence)
XM_017005942.1
, XM_017005942.2
Accession Version
XM_017005942.1
Documents for ORF clone product in default vector
Sequence Information
ORF Nucleotide Sequence (Length: 3114bp)
Protein sequence
SNP
Vector
pcDNA3.1+ /C-(K)DYK or customized vector
User Manual
Clone information
Clone Map
MSDS
Tag on pcDNA3.1+ /C-(K)DYK
C terminal DYKDDDDK tags
ORF Insert Method
CloneEZ™ Seamless cloning technology
Insert Structure
linear
Update Date
2016-06-05
Organism
Homo sapiens(human)
Product
E3 ubiquitin-protein ligase PDZRN3 isoform X1
Comment
Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000003.12) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Status :: Full annotation
Annotation Version :: Homo sapiens Annotation Release 108
Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline
Annotation Software Version :: 7.0
Annotation Method :: Best-placed RefSeq; Gnomon
Features Annotated :: Gene; mRNA; CDS; ncRNA
##Genome-Annotation-Data-END##
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021 1081 1141 1201 1261 1321 1381 1441 1501 1561 1621 1681 1741 1801 1861 1921 1981 2041 2101 2161 2221 2281 2341 2401 2461 2521 2581 2641 2701 2761 2821 2881 2941 3001 3061 ATGGGCTTCG AGCTGGACCG CTTCGACGGC GACGTGGACC CGGACCTGAA GTGCGCGCTG TGCCACAAGG TCCTGGAGGA CCCGCTGACC ACGCCGTGCG GCCACGTCTT CTGCGCCGGC TGCGTGCTGC CCTGGGTGGT GCAGGAGGGC AGCTGCCCGG CGCGCTGCCG CGGTCGCCTG TCGGCCAAAG AGCTCAACCA CGTCCTGCCG CTCAAGCGCC TTATCCTCAA GCTGGACATC AAGTGCGCGT ACGCGACGCG CGGCTGCGGC CGGGTGGTCA AGCTGCAGCA GCTGCCGGAG CACCTCGAGC GCTGCGACTT CGCGCCCGCG CGCTGTCGCC ACGCGGGTTG CGGCCAGGTG CTGCTGCGGC GCGACGTGGA GGCGCACATG CGCGACGCCT GCGACGCGCG GCCAGTGGGC CGCTGCCAGG AGGGCTGCGG GCTACCCTTG ACGCACGGCG AGCAGCGCGC GGGCGGCCAC TGCTGCGCGC GAGCGCTGCG GGCGCACAAC GGCGCGCTCC AGGCCCGCCT GGGCGCGCTG CACAAGGCGC TCAAGAAGGA GGCGCTGCGC GCTGGGAAGC GCGAGAAGTC GCTGGTGGCC CAGCTGGCCG CGGCGCAGCT TGAGCTGCAG ATGACCGCGC TGCGCTACCA GAAGAAATTC ACCGAATACA GCGCGCGCCT CGACTCGCTC AGCCGCTGCG TGGCCGCGCC GCCCGGCGGC AAGGATAACC ACGATGGATC ATCCAGTGAA GGAATCTTTG TATCCAAGAT AGTTGACAGT GGGCCTGCAG CCAAGGAAGG AGGCCTGCAA ATTCATGACA GGATTATTGA GGTCAACGGC AGAGACTTAT CCAGAGCAAC TCATGACCAG GCTGTGGAAG CTTTCAAGAC AGCCAAGGAG CCCATAGTGG TGCAGGTGTT GAGAAGAACA CCAAGGACCA AAATGTTCAC GCCTCCATCA GAGTCTCAGC TGGTGGACAC GGGAACCCAA ACCGACATCA CCTTTGAACA TATCATGGCC CTCACTAAGA TGTCCTCTCC CAGCCCACCC GTGCTGGATC CCTATCTCTT GCCAGAGGAG CATCCCTCAG CCCATGAATA CTACGATCCA AATGACTACA TTGGAGACAT CCATCAGGAG ATGGACAGGG AGGAGCTGGA GCTGGAGGAA GTGGACCTCT ACAGAATGAA CAGCCAGGAC AAGCTGGGCC TCACTGTGTG CTACCGGACG GACGATGAAG ACGACATTGG GATTTATATC AGTGAGATTG ACCCTAACAG CATTGCAGCC AAGGATGGGC GCATCCGAGA AGGAGACCGC ATTATCCAGA TTAATGGGAT AGAGGTGCAG AACCGTGAAG AGGCTGTGGC TCTTCTAACC AGTGAAGAAA ATAAAAACTT TTCATTGCTG ATTGCAAGGC CTGAACTCCA GCTGGATGAG GGCTGGATGG ATGATGACAG GAACGACTTT CTGGATGACC TGCACATGGA CATGCTGGAG GAGCAGCACC ACCAGGCCAT GCAATTCACA GCTAGCGTGC TGCAGCAGAA GAAGCACGAC GAAGACGGTG GGACCACAGA TACAGCCACC ATCTTGTCCA ACCAGCACGA GAAGGACAGC GGTGTGGGGC GGACCGACGA GAGCACCCGT AATGACGAGA GCTCGGAGCA AGAGAACAAT GGCGACGACG CCACCGCATC CTCCAACCCG CTGGCGGGGC AGAGGAAGCT CACCTGCAGC CAGGACACCT TGGGCAGCGG CGACCTGCCC TTCAGCAACG AGTCTTTCAT TTCGGCCGAC TGCACGGACG CCGACTACCT GGGGATCCCG GTGGACGAGT GCGAGCGCTT CCGCGAGCTC CTGGAGCTCA AGTGCCAGGT GAAGAGCGCC ACCCCTTACG GCCTGTACTA CCCTAGCGGC CCCCTGGACG CCGGCAAGAG TGACCCTGAG AGCGTGGACA AGGAGCTGGA GCTGCTGAAC GAAGAGCTGC GCAGCATCGA GCTGGAGTGC CTGAGCATCG TGCGCGCCCA CAAGATGCAG CAGCTCAAGG AGCAGTACCG CGAGTCCTGG ATGCTGCACA ACAGCGGCTT CCGCAACTAC AACACCAGCA TCGACGTGCG CAGACACGAG CTCTCAGATA TCACCGAGCT CCCGGAGAAA TCCGACAAGG ACAGCTCGAG CGCCTACAAC ACAGGCGAGA GCTGCCGCAG CACCCCGCTC ACCCTGGAGA TCTCCCCCGA CAACTCCTTG AGGAGAGCGG CGGAGGGCAT CAGCTGCCCG AGCAGCGAAG GGGCTGTGGG GACCACGGAA GCCTACGGGC CAGCCTCCAA GAATCTGCTC TCCATCACGG AAGATCCCGA AGTGGGCACC CCTACCTATA GCCCGTCCCT GAAGGAGCTG GACCCCAACC AGCCCCTGGA AAGCAAAGAG CGGAGAGCCA GCGACGGGAG CCGGAGCCCC ACGCCCAGCC AGAAGCTGGG CAGCGCCTAC CTGCCCTCCT ATCACCACTC CCCATACAAG CACGCGCACA TCCCGGCGCA CGCCCAGCAC TACCAGAGCT ACATGCAGCT GATCCAGCAG AAGTCGGCCG TGGAGTACGC GCAAAGCCAG ATGAGCCTGG TGAGCATGTG CAAGGACCTG AGCTCTCCCA CCCCGTCGGA GCCGCGCATG GAGTGGAAGG TGAAGATCCG CAGCGACGGG ACGCGCTACA TCACCAAGAG GCCCGTGCGG GACCGCCTGC TGCGGGAGCG CGCCCTGAAG ATCCGGGAAG AGCGCAGCGG CATGACCACC GACGACGACG CGGTGAGCGA GATGAAGATG GGGCGCTACT GGAGCAAGGA GGAGAGGAAG CAGCACCTGG TGAAGGCCAA GGAGCAGCGG CGGCGGCGCG AGTTCATGAT GCAGAGCAGG TTGGATTGTC TCAAGGAGCA GCAAGCAGCC GATGACAGGA AGGAGATGAA CATTCTCGAA CTGAGCCACA AAAAGATGAT GAAGAAGAGG AATAAGAAAA TCTTCGATAA CTGGATGACG ATCCAAGAAC TCTTAACCCA CGGCACAAAA TCCCCGGACG GCACTAGAGT ATACAATTCC TTCCTATCGG TGACTACTGT ATAA
The stop codons will be deleted if pcDNA3.1+ /C-(K)DYK vector is selected.
RefSeq
XP_016861431.1
CDS 179..3292
Translation
Target ORF information:
RefSeq Version XM_017005942.1
Organism Homo sapiens(human)
Definition Homo sapiens PDZ domain containing ring finger 3 (PDZRN3), transcript variant X1, mRNA.
Target ORF information:
Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+ /C-(K)DYK
XM_017005942.1
ORF Insert Sequence:
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021 1081 1141 1201 1261 1321 1381 1441 1501 1561 1621 1681 1741 1801 1861 1921 1981 2041 2101 2161 2221 2281 2341 2401 2461 2521 2581 2641 2701 2761 2821 2881 2941 3001 3061 ATGGGCTTCG AGCTGGACCG CTTCGACGGC GACGTGGACC CGGACCTGAA GTGCGCGCTG TGCCACAAGG TCCTGGAGGA CCCGCTGACC ACGCCGTGCG GCCACGTCTT CTGCGCCGGC TGCGTGCTGC CCTGGGTGGT GCAGGAGGGC AGCTGCCCGG CGCGCTGCCG CGGTCGCCTG TCGGCCAAAG AGCTCAACCA CGTCCTGCCG CTCAAGCGCC TTATCCTCAA GCTGGACATC AAGTGCGCGT ACGCGACGCG CGGCTGCGGC CGGGTGGTCA AGCTGCAGCA GCTGCCGGAG CACCTCGAGC GCTGCGACTT CGCGCCCGCG CGCTGTCGCC ACGCGGGTTG CGGCCAGGTG CTGCTGCGGC GCGACGTGGA GGCGCACATG CGCGACGCCT GCGACGCGCG GCCAGTGGGC CGCTGCCAGG AGGGCTGCGG GCTACCCTTG ACGCACGGCG AGCAGCGCGC GGGCGGCCAC TGCTGCGCGC GAGCGCTGCG GGCGCACAAC GGCGCGCTCC AGGCCCGCCT GGGCGCGCTG CACAAGGCGC TCAAGAAGGA GGCGCTGCGC GCTGGGAAGC GCGAGAAGTC GCTGGTGGCC CAGCTGGCCG CGGCGCAGCT TGAGCTGCAG ATGACCGCGC TGCGCTACCA GAAGAAATTC ACCGAATACA GCGCGCGCCT CGACTCGCTC AGCCGCTGCG TGGCCGCGCC GCCCGGCGGC AAGGATAACC ACGATGGATC ATCCAGTGAA GGAATCTTTG TATCCAAGAT AGTTGACAGT GGGCCTGCAG CCAAGGAAGG AGGCCTGCAA ATTCATGACA GGATTATTGA GGTCAACGGC AGAGACTTAT CCAGAGCAAC TCATGACCAG GCTGTGGAAG CTTTCAAGAC AGCCAAGGAG CCCATAGTGG TGCAGGTGTT GAGAAGAACA CCAAGGACCA AAATGTTCAC GCCTCCATCA GAGTCTCAGC TGGTGGACAC GGGAACCCAA ACCGACATCA CCTTTGAACA TATCATGGCC CTCACTAAGA TGTCCTCTCC CAGCCCACCC GTGCTGGATC CCTATCTCTT GCCAGAGGAG CATCCCTCAG CCCATGAATA CTACGATCCA AATGACTACA TTGGAGACAT CCATCAGGAG ATGGACAGGG AGGAGCTGGA GCTGGAGGAA GTGGACCTCT ACAGAATGAA CAGCCAGGAC AAGCTGGGCC TCACTGTGTG CTACCGGACG GACGATGAAG ACGACATTGG GATTTATATC AGTGAGATTG ACCCTAACAG CATTGCAGCC AAGGATGGGC GCATCCGAGA AGGAGACCGC ATTATCCAGA TTAATGGGAT AGAGGTGCAG AACCGTGAAG AGGCTGTGGC TCTTCTAACC AGTGAAGAAA ATAAAAACTT TTCATTGCTG ATTGCAAGGC CTGAACTCCA GCTGGATGAG GGCTGGATGG ATGATGACAG GAACGACTTT CTGGATGACC TGCACATGGA CATGCTGGAG GAGCAGCACC ACCAGGCCAT GCAATTCACA GCTAGCGTGC TGCAGCAGAA GAAGCACGAC GAAGACGGTG GGACCACAGA TACAGCCACC ATCTTGTCCA ACCAGCACGA GAAGGACAGC GGTGTGGGGC GGACCGACGA GAGCACCCGT AATGACGAGA GCTCGGAGCA AGAGAACAAT GGCGACGACG CCACCGCATC CTCCAACCCG CTGGCGGGGC AGAGGAAGCT CACCTGCAGC CAGGACACCT TGGGCAGCGG CGACCTGCCC TTCAGCAACG AGTCTTTCAT TTCGGCCGAC TGCACGGACG CCGACTACCT GGGGATCCCG GTGGACGAGT GCGAGCGCTT CCGCGAGCTC CTGGAGCTCA AGTGCCAGGT GAAGAGCGCC ACCCCTTACG GCCTGTACTA CCCTAGCGGC CCCCTGGACG CCGGCAAGAG TGACCCTGAG AGCGTGGACA AGGAGCTGGA GCTGCTGAAC GAAGAGCTGC GCAGCATCGA GCTGGAGTGC CTGAGCATCG TGCGCGCCCA CAAGATGCAG CAGCTCAAGG AGCAGTACCG CGAGTCCTGG ATGCTGCACA ACAGCGGCTT CCGCAACTAC AACACCAGCA TCGACGTGCG CAGACACGAG CTCTCAGATA TCACCGAGCT CCCGGAGAAA TCCGACAAGG ACAGCTCGAG CGCCTACAAC ACAGGCGAGA GCTGCCGCAG CACCCCGCTC ACCCTGGAGA TCTCCCCCGA CAACTCCTTG AGGAGAGCGG CGGAGGGCAT CAGCTGCCCG AGCAGCGAAG GGGCTGTGGG GACCACGGAA GCCTACGGGC CAGCCTCCAA GAATCTGCTC TCCATCACGG AAGATCCCGA AGTGGGCACC CCTACCTATA GCCCGTCCCT GAAGGAGCTG GACCCCAACC AGCCCCTGGA AAGCAAAGAG CGGAGAGCCA GCGACGGGAG CCGGAGCCCC ACGCCCAGCC AGAAGCTGGG CAGCGCCTAC CTGCCCTCCT ATCACCACTC CCCATACAAG CACGCGCACA TCCCGGCGCA CGCCCAGCAC TACCAGAGCT ACATGCAGCT GATCCAGCAG AAGTCGGCCG TGGAGTACGC GCAAAGCCAG ATGAGCCTGG TGAGCATGTG CAAGGACCTG AGCTCTCCCA CCCCGTCGGA GCCGCGCATG GAGTGGAAGG TGAAGATCCG CAGCGACGGG ACGCGCTACA TCACCAAGAG GCCCGTGCGG GACCGCCTGC TGCGGGAGCG CGCCCTGAAG ATCCGGGAAG AGCGCAGCGG CATGACCACC GACGACGACG CGGTGAGCGA GATGAAGATG GGGCGCTACT GGAGCAAGGA GGAGAGGAAG CAGCACCTGG TGAAGGCCAA GGAGCAGCGG CGGCGGCGCG AGTTCATGAT GCAGAGCAGG TTGGATTGTC TCAAGGAGCA GCAAGCAGCC GATGACAGGA AGGAGATGAA CATTCTCGAA CTGAGCCACA AAAAGATGAT GAAGAAGAGG AATAAGAAAA TCTTCGATAA CTGGATGACG ATCCAAGAAC TCTTAACCCA CGGCACAAAA TCCCCGGACG GCACTAGAGT ATACAATTCC TTCCTATCGG TGACTACTGT ATAA
The stop codons will be deleted if pcDNA3.1+ /C-(K)DYK vector is selected.
CloneID
OHu93907
Clone ID Related Accession (Same CDS sequence)
XM_017005942.1
, XM_017005942.2
Accession Version
XM_017005942.2 Latest version!
Documents for ORF clone product in default vector
Sequence Information
ORF Nucleotide Sequence (Length: 3114bp)
Protein sequence
SNP
Vector
pcDNA3.1+ /C-(K)DYK or customized vector
User Manual
Clone information
Clone Map
MSDS
Tag on pcDNA3.1+ /C-(K)DYK
C terminal DYKDDDDK tags
ORF Insert Method
CloneEZ™ Seamless cloning technology
Insert Structure
linear
Update Date
2019-12-05
Organism
Homo sapiens(human)
Product
E3 ubiquitin-protein ligase PDZRN3 isoform X1
Comment
Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000003.12) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process
On Mar 26, 2018 this sequence version replaced XM_017005942.1.
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Status :: Updated annotation
Annotation Name :: Homo sapiens Updated Annotation Release 109.20191205
Annotation Version :: 109.20191205
Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline
Annotation Software Version :: 8.3
Annotation Method :: Best-placed RefSeq; propagated RefSeq model
Features Annotated :: Gene; mRNA; CDS; ncRNA
##Genome-Annotation-Data-END##
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021 1081 1141 1201 1261 1321 1381 1441 1501 1561 1621 1681 1741 1801 1861 1921 1981 2041 2101 2161 2221 2281 2341 2401 2461 2521 2581 2641 2701 2761 2821 2881 2941 3001 3061 ATGGGCTTCG AGCTGGACCG CTTCGACGGC GACGTGGACC CGGACCTGAA GTGCGCGCTG TGCCACAAGG TCCTGGAGGA CCCGCTGACC ACGCCGTGCG GCCACGTCTT CTGCGCCGGC TGCGTGCTGC CCTGGGTGGT GCAGGAGGGC AGCTGCCCGG CGCGCTGCCG CGGTCGCCTG TCGGCCAAAG AGCTCAACCA CGTCCTGCCG CTCAAGCGCC TTATCCTCAA GCTGGACATC AAGTGCGCGT ACGCGACGCG CGGCTGCGGC CGGGTGGTCA AGCTGCAGCA GCTGCCGGAG CACCTCGAGC GCTGCGACTT CGCGCCCGCG CGCTGTCGCC ACGCGGGTTG CGGCCAGGTG CTGCTGCGGC GCGACGTGGA GGCGCACATG CGCGACGCCT GCGACGCGCG GCCAGTGGGC CGCTGCCAGG AGGGCTGCGG GCTACCCTTG ACGCACGGCG AGCAGCGCGC GGGCGGCCAC TGCTGCGCGC GAGCGCTGCG GGCGCACAAC GGCGCGCTCC AGGCCCGCCT GGGCGCGCTG CACAAGGCGC TCAAGAAGGA GGCGCTGCGC GCTGGGAAGC GCGAGAAGTC GCTGGTGGCC CAGCTGGCCG CGGCGCAGCT TGAGCTGCAG ATGACCGCGC TGCGCTACCA GAAGAAATTC ACCGAATACA GCGCGCGCCT CGACTCGCTC AGCCGCTGCG TGGCCGCGCC GCCCGGCGGC AAGGATAACC ACGATGGATC ATCCAGTGAA GGAATCTTTG TATCCAAGAT AGTTGACAGT GGGCCTGCAG CCAAGGAAGG AGGCCTGCAA ATTCATGACA GGATTATTGA GGTCAACGGC AGAGACTTAT CCAGAGCAAC TCATGACCAG GCTGTGGAAG CTTTCAAGAC AGCCAAGGAG CCCATAGTGG TGCAGGTGTT GAGAAGAACA CCAAGGACCA AAATGTTCAC GCCTCCATCA GAGTCTCAGC TGGTGGACAC GGGAACCCAA ACCGACATCA CCTTTGAACA TATCATGGCC CTCACTAAGA TGTCCTCTCC CAGCCCACCC GTGCTGGATC CCTATCTCTT GCCAGAGGAG CATCCCTCAG CCCATGAATA CTACGATCCA AATGACTACA TTGGAGACAT CCATCAGGAG ATGGACAGGG AGGAGCTGGA GCTGGAGGAA GTGGACCTCT ACAGAATGAA CAGCCAGGAC AAGCTGGGCC TCACTGTGTG CTACCGGACG GACGATGAAG ACGACATTGG GATTTATATC AGTGAGATTG ACCCTAACAG CATTGCAGCC AAGGATGGGC GCATCCGAGA AGGAGACCGC ATTATCCAGA TTAATGGGAT AGAGGTGCAG AACCGTGAAG AGGCTGTGGC TCTTCTAACC AGTGAAGAAA ATAAAAACTT TTCATTGCTG ATTGCAAGGC CTGAACTCCA GCTGGATGAG GGCTGGATGG ATGATGACAG GAACGACTTT CTGGATGACC TGCACATGGA CATGCTGGAG GAGCAGCACC ACCAGGCCAT GCAATTCACA GCTAGCGTGC TGCAGCAGAA GAAGCACGAC GAAGACGGTG GGACCACAGA TACAGCCACC ATCTTGTCCA ACCAGCACGA GAAGGACAGC GGTGTGGGGC GGACCGACGA GAGCACCCGT AATGACGAGA GCTCGGAGCA AGAGAACAAT GGCGACGACG CCACCGCATC CTCCAACCCG CTGGCGGGGC AGAGGAAGCT CACCTGCAGC CAGGACACCT TGGGCAGCGG CGACCTGCCC TTCAGCAACG AGTCTTTCAT TTCGGCCGAC TGCACGGACG CCGACTACCT GGGGATCCCG GTGGACGAGT GCGAGCGCTT CCGCGAGCTC CTGGAGCTCA AGTGCCAGGT GAAGAGCGCC ACCCCTTACG GCCTGTACTA CCCTAGCGGC CCCCTGGACG CCGGCAAGAG TGACCCTGAG AGCGTGGACA AGGAGCTGGA GCTGCTGAAC GAAGAGCTGC GCAGCATCGA GCTGGAGTGC CTGAGCATCG TGCGCGCCCA CAAGATGCAG CAGCTCAAGG AGCAGTACCG CGAGTCCTGG ATGCTGCACA ACAGCGGCTT CCGCAACTAC AACACCAGCA TCGACGTGCG CAGACACGAG CTCTCAGATA TCACCGAGCT CCCGGAGAAA TCCGACAAGG ACAGCTCGAG CGCCTACAAC ACAGGCGAGA GCTGCCGCAG CACCCCGCTC ACCCTGGAGA TCTCCCCCGA CAACTCCTTG AGGAGAGCGG CGGAGGGCAT CAGCTGCCCG AGCAGCGAAG GGGCTGTGGG GACCACGGAA GCCTACGGGC CAGCCTCCAA GAATCTGCTC TCCATCACGG AAGATCCCGA AGTGGGCACC CCTACCTATA GCCCGTCCCT GAAGGAGCTG GACCCCAACC AGCCCCTGGA AAGCAAAGAG CGGAGAGCCA GCGACGGGAG CCGGAGCCCC ACGCCCAGCC AGAAGCTGGG CAGCGCCTAC CTGCCCTCCT ATCACCACTC CCCATACAAG CACGCGCACA TCCCGGCGCA CGCCCAGCAC TACCAGAGCT ACATGCAGCT GATCCAGCAG AAGTCGGCCG TGGAGTACGC GCAAAGCCAG ATGAGCCTGG TGAGCATGTG CAAGGACCTG AGCTCTCCCA CCCCGTCGGA GCCGCGCATG GAGTGGAAGG TGAAGATCCG CAGCGACGGG ACGCGCTACA TCACCAAGAG GCCCGTGCGG GACCGCCTGC TGCGGGAGCG CGCCCTGAAG ATCCGGGAAG AGCGCAGCGG CATGACCACC GACGACGACG CGGTGAGCGA GATGAAGATG GGGCGCTACT GGAGCAAGGA GGAGAGGAAG CAGCACCTGG TGAAGGCCAA GGAGCAGCGG CGGCGGCGCG AGTTCATGAT GCAGAGCAGG TTGGATTGTC TCAAGGAGCA GCAAGCAGCC GATGACAGGA AGGAGATGAA CATTCTCGAA CTGAGCCACA AAAAGATGAT GAAGAAGAGG AATAAGAAAA TCTTCGATAA CTGGATGACG ATCCAAGAAC TCTTAACCCA CGGCACAAAA TCCCCGGACG GCACTAGAGT ATACAATTCC TTCCTATCGG TGACTACTGT ATAA
The stop codons will be deleted if pcDNA3.1+ /C-(K)DYK vector is selected.
RefSeq
XP_016861431.1
CDS 173..3286
Translation
Target ORF information:
RefSeq Version XM_017005942.2
Organism Homo sapiens(human)
Definition Homo sapiens PDZ domain containing ring finger 3 (PDZRN3), transcript variant X1, mRNA.
Target ORF information:
Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+ /C-(K)DYK
XM_017005942.2
ORF Insert Sequence:
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021 1081 1141 1201 1261 1321 1381 1441 1501 1561 1621 1681 1741 1801 1861 1921 1981 2041 2101 2161 2221 2281 2341 2401 2461 2521 2581 2641 2701 2761 2821 2881 2941 3001 3061 ATGGGCTTCG AGCTGGACCG CTTCGACGGC GACGTGGACC CGGACCTGAA GTGCGCGCTG TGCCACAAGG TCCTGGAGGA CCCGCTGACC ACGCCGTGCG GCCACGTCTT CTGCGCCGGC TGCGTGCTGC CCTGGGTGGT GCAGGAGGGC AGCTGCCCGG CGCGCTGCCG CGGTCGCCTG TCGGCCAAAG AGCTCAACCA CGTCCTGCCG CTCAAGCGCC TTATCCTCAA GCTGGACATC AAGTGCGCGT ACGCGACGCG CGGCTGCGGC CGGGTGGTCA AGCTGCAGCA GCTGCCGGAG CACCTCGAGC GCTGCGACTT CGCGCCCGCG CGCTGTCGCC ACGCGGGTTG CGGCCAGGTG CTGCTGCGGC GCGACGTGGA GGCGCACATG CGCGACGCCT GCGACGCGCG GCCAGTGGGC CGCTGCCAGG AGGGCTGCGG GCTACCCTTG ACGCACGGCG AGCAGCGCGC GGGCGGCCAC TGCTGCGCGC GAGCGCTGCG GGCGCACAAC GGCGCGCTCC AGGCCCGCCT GGGCGCGCTG CACAAGGCGC TCAAGAAGGA GGCGCTGCGC GCTGGGAAGC GCGAGAAGTC GCTGGTGGCC CAGCTGGCCG CGGCGCAGCT TGAGCTGCAG ATGACCGCGC TGCGCTACCA GAAGAAATTC ACCGAATACA GCGCGCGCCT CGACTCGCTC AGCCGCTGCG TGGCCGCGCC GCCCGGCGGC AAGGATAACC ACGATGGATC ATCCAGTGAA GGAATCTTTG TATCCAAGAT AGTTGACAGT GGGCCTGCAG CCAAGGAAGG AGGCCTGCAA ATTCATGACA GGATTATTGA GGTCAACGGC AGAGACTTAT CCAGAGCAAC TCATGACCAG GCTGTGGAAG CTTTCAAGAC AGCCAAGGAG CCCATAGTGG TGCAGGTGTT GAGAAGAACA CCAAGGACCA AAATGTTCAC GCCTCCATCA GAGTCTCAGC TGGTGGACAC GGGAACCCAA ACCGACATCA CCTTTGAACA TATCATGGCC CTCACTAAGA TGTCCTCTCC CAGCCCACCC GTGCTGGATC CCTATCTCTT GCCAGAGGAG CATCCCTCAG CCCATGAATA CTACGATCCA AATGACTACA TTGGAGACAT CCATCAGGAG ATGGACAGGG AGGAGCTGGA GCTGGAGGAA GTGGACCTCT ACAGAATGAA CAGCCAGGAC AAGCTGGGCC TCACTGTGTG CTACCGGACG GACGATGAAG ACGACATTGG GATTTATATC AGTGAGATTG ACCCTAACAG CATTGCAGCC AAGGATGGGC GCATCCGAGA AGGAGACCGC ATTATCCAGA TTAATGGGAT AGAGGTGCAG AACCGTGAAG AGGCTGTGGC TCTTCTAACC AGTGAAGAAA ATAAAAACTT TTCATTGCTG ATTGCAAGGC CTGAACTCCA GCTGGATGAG GGCTGGATGG ATGATGACAG GAACGACTTT CTGGATGACC TGCACATGGA CATGCTGGAG GAGCAGCACC ACCAGGCCAT GCAATTCACA GCTAGCGTGC TGCAGCAGAA GAAGCACGAC GAAGACGGTG GGACCACAGA TACAGCCACC ATCTTGTCCA ACCAGCACGA GAAGGACAGC GGTGTGGGGC GGACCGACGA GAGCACCCGT AATGACGAGA GCTCGGAGCA AGAGAACAAT GGCGACGACG CCACCGCATC CTCCAACCCG CTGGCGGGGC AGAGGAAGCT CACCTGCAGC CAGGACACCT TGGGCAGCGG CGACCTGCCC TTCAGCAACG AGTCTTTCAT TTCGGCCGAC TGCACGGACG CCGACTACCT GGGGATCCCG GTGGACGAGT GCGAGCGCTT CCGCGAGCTC CTGGAGCTCA AGTGCCAGGT GAAGAGCGCC ACCCCTTACG GCCTGTACTA CCCTAGCGGC CCCCTGGACG CCGGCAAGAG TGACCCTGAG AGCGTGGACA AGGAGCTGGA GCTGCTGAAC GAAGAGCTGC GCAGCATCGA GCTGGAGTGC CTGAGCATCG TGCGCGCCCA CAAGATGCAG CAGCTCAAGG AGCAGTACCG CGAGTCCTGG ATGCTGCACA ACAGCGGCTT CCGCAACTAC AACACCAGCA TCGACGTGCG CAGACACGAG CTCTCAGATA TCACCGAGCT CCCGGAGAAA TCCGACAAGG ACAGCTCGAG CGCCTACAAC ACAGGCGAGA GCTGCCGCAG CACCCCGCTC ACCCTGGAGA TCTCCCCCGA CAACTCCTTG AGGAGAGCGG CGGAGGGCAT CAGCTGCCCG AGCAGCGAAG GGGCTGTGGG GACCACGGAA GCCTACGGGC CAGCCTCCAA GAATCTGCTC TCCATCACGG AAGATCCCGA AGTGGGCACC CCTACCTATA GCCCGTCCCT GAAGGAGCTG GACCCCAACC AGCCCCTGGA AAGCAAAGAG CGGAGAGCCA GCGACGGGAG CCGGAGCCCC ACGCCCAGCC AGAAGCTGGG CAGCGCCTAC CTGCCCTCCT ATCACCACTC CCCATACAAG CACGCGCACA TCCCGGCGCA CGCCCAGCAC TACCAGAGCT ACATGCAGCT GATCCAGCAG AAGTCGGCCG TGGAGTACGC GCAAAGCCAG ATGAGCCTGG TGAGCATGTG CAAGGACCTG AGCTCTCCCA CCCCGTCGGA GCCGCGCATG GAGTGGAAGG TGAAGATCCG CAGCGACGGG ACGCGCTACA TCACCAAGAG GCCCGTGCGG GACCGCCTGC TGCGGGAGCG CGCCCTGAAG ATCCGGGAAG AGCGCAGCGG CATGACCACC GACGACGACG CGGTGAGCGA GATGAAGATG GGGCGCTACT GGAGCAAGGA GGAGAGGAAG CAGCACCTGG TGAAGGCCAA GGAGCAGCGG CGGCGGCGCG AGTTCATGAT GCAGAGCAGG TTGGATTGTC TCAAGGAGCA GCAAGCAGCC GATGACAGGA AGGAGATGAA CATTCTCGAA CTGAGCCACA AAAAGATGAT GAAGAAGAGG AATAAGAAAA TCTTCGATAA CTGGATGACG ATCCAAGAAC TCTTAACCCA CGGCACAAAA TCCCCGGACG GCACTAGAGT ATACAATTCC TTCCTATCGG TGACTACTGT ATAA
The stop codons will be deleted if pcDNA3.1+ /C-(K)DYK vector is selected.
The ubiquitin ligase PDZRN3 is required for vascular morphogenesis through Wnt/planar cell polarity signalling.
Nature communications54832(2014 Sep)
Sewduth RN,Jaspard-Vinassa B,Peghaire C,Guillabert A,Franzl N,Larrieu-Lahargue F,Moreau C,Fruttiger M,Dufourcq P,Couffinhal T,Dupl?a C