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C16orf54 cDNA ORF clone, Homo sapiens(human)

Summary

Gene Symbol C16orf54
Entrez Gene ID 283897
Full Name chromosome 16 open reading frame 54
General protein information
Preferred Names

chromosome 16 open reading frame 54

Names

transmembrane protein C16orf54
Gene Type protein-coding
Organism Homo sapiens(human)
Genome

16

16p11.2

Reference Sequences (RefSeq)

mRNA and Protein(s)

mRNA Protein Name
NM_175900.4 NP_787096.2 transmembrane protein C16orf54
NM_175900.3 NP_787096.2 transmembrane protein C16orf54

Pathways from BioSystems


Homologies


C20H16orf54 XP_001103947.1
Pan troglodytes (chimpanzee) C16H16orf54 XP_001143194.1
Homo sapiens (human) C16orf54 NP_787096.2
Mus musculus (house mouse) AI467606 NP_849232.1
Canis lupus familiaris (dog) C6H16orf54 XP_003639170.1
Bos taurus (cattle) C25H16orf54 NP_001098503.1
Rattus norvegicus (Norway rat) LOC308990 NP_001020172.1

Gene Ontology


Bibliography

Related articles in PubMed

The secreted protein discovery initiative (SPDI), a large-scale effort to identify novel human secreted and transmembrane proteins: a bioinformatics assessment.
Clark HF, Gurney AL, Abaya E, Baker K, Baldwin D, Brush J, Chen J, Chow B, Chui C, Crowley C, Currell B, Deuel B, Dowd P, Eaton D, Foster J, Grimaldi C, Gu Q, Hass PE, Heldens S, Huang A, Kim HS, Klimowski L, Jin Y, Johnson S, Lee J, Lewis L, Liao D, Mark M, Robbie E, Sanchez C, Schoenfeld J, Seshagiri S, Simmons L, Singh J, Smith V, Stinson J, Vagts A, Vandlen R, Watanabe C, Wieand D, Woods K, Xie MH, Yansura D, Yi S, Yu G, Yuan J, Zhang M, Zhang Z, Goddard A, Wood WI, Godowski P, Gray A
Genome research13(10)2265-70(2003 Oct)

Genome duplications and other features in 12 Mb of DNA sequence from human chromosome 16p and 16q.
Loftus BJ, Kim UJ, Sneddon VP, Kalush F, Brandon R, Fuhrmann J, Mason T, Crosby ML, Barnstead M, Cronin L, Deslattes Mays A, Cao Y, Xu RX, Kang HL, Mitchell S, Eichler EE, Harris PC, Venter JC, Adams MD
Genomics60(3)295-308(1999 Sep)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following C16orf54 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the C16orf54 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OHu07424 NM_175900.4
Latest version!		 Homo sapiens chromosome 16 open reading frame 54 (C16orf54), mRNA. pcDNA3.1-C-(k)DYK or customized vector
in pcDNA3.1-C-(k)DYK 		$99.50-$139.30
$199.00
View Old Accession Versions >>
OHu07424 NM_175900.3 Homo sapiens chromosome 16 open reading frame 54 (C16orf54), mRNA. pcDNA3.1-C-(k)DYK or customized vector
in pcDNA3.1-C-(k)DYK 		$99.50-$139.30
$199.00
Hide Old Accession Versions >>

ORF Online Only Promotion

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)


CloneID OHu07424
Clone ID Related Accession (Same CDS sequence) NM_175900.4 , NM_175900.3
Accession Version NM_175900.4 Latest version! Documents for ORF clone product in default vector
Sequence Information ORF Nucleotide Sequence (Length: 675bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ™ Seamless cloning technology
Insert Structure linear
Update Date 2019-05-01
Organism Homo sapiens(human)
Product transmembrane protein C16orf54
Comment Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from DA427069.1, BC104466.2, BC025741.1 and AC009133.7. On Nov 22, 2018 this sequence version replaced NM_175900.3. ##Evidence-Data-START## Transcript exon combination :: BC025741.1, AK093000.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA2153031, SAMEA2155770 [ECO:0000348] ##Evidence-Data-END## ##RefSeq-Attributes-START## MANE Ensembl match :: ENST00000329410.4/ ENSP00000327506.3 RefSeq Select criteria :: based on single protein-coding transcript ##RefSeq-Attributes-END## COMPLETENESS: full length. 

1
61
121
181
241
301
361
421
481
541
601
661
ATGCCGTTGA CTCCAGAGCC GCCCTCTGGG CGCGTGGAGG GGCCCCCCGC ATGGGAAGCA 
GCCCCATGGC CCTCACTGCC CTGTGGGCCC TGCATCCCCA TCATGCTGGT CCTGGCCACC 
CTGGCTGCGC TCTTCATCCT CACCACCGCT GTGTTGGCTG AACGCCTGTT CCGCCGTGCT 
CTCCGCCCAG ACCCCAGCCA CCGTGCACCC ACCCTGGTGT GGCGCCCAGG AGGAGAGCTG 
TGGATTGAGC CCATGGGCAC CGCCCGAGAG CGCTCTGAGG ACTGGTATGG CTCTGCGGTC 
CCCCTGCTGA CAGATCGGGC CCCTGAGCCT CCCACCCAGG TGGGCACTTT GGAGGCCCGA 
GCAACAGCCC CACCTGCCCC CTCAGCCCCA AATTCTGCTC CCAGCAACTT GGGCCCCCAG 
ACCGTACTGG AGGTCCCAGC CCGGAGCACC TTCTGGGGGC CCCAGCCCTG GGAGGGGAGG 
CCCCCCGCCA CAGGCCTGGT GAGCTGGGCT GAACCCGAGC AGAGGCCAGA GGCCAGCGTC 
CAGTTTGGGA GCCCCCAGGC CAGGAGGCAG CGGCCAGGGA GCCCGGATCC TGAGTGGGGC 
CTCCAGCCAC GGGTCACCTT GGAGCAGATC TCAGCTTTCT GGAAGCGTGA AGGCCGGACC 
AGTGTGGGGT TCTGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq NP_787096.2
CDS81..755
Translation

Target ORF information:

RefSeq Version NM_175900.4
Organism Homo sapiens(human)
Definition Homo sapiens chromosome 16 open reading frame 54 (C16orf54), mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
 NM_175900.4

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
601
661
ATGCCGTTGA CTCCAGAGCC GCCCTCTGGG CGCGTGGAGG GGCCCCCCGC ATGGGAAGCA 
GCCCCATGGC CCTCACTGCC CTGTGGGCCC TGCATCCCCA TCATGCTGGT CCTGGCCACC 
CTGGCTGCGC TCTTCATCCT CACCACCGCT GTGTTGGCTG AACGCCTGTT CCGCCGTGCT 
CTCCGCCCAG ACCCCAGCCA CCGTGCACCC ACCCTGGTGT GGCGCCCAGG AGGAGAGCTG 
TGGATTGAGC CCATGGGCAC CGCCCGAGAG CGCTCTGAGG ACTGGTATGG CTCTGCGGTC 
CCCCTGCTGA CAGATCGGGC CCCTGAGCCT CCCACCCAGG TGGGCACTTT GGAGGCCCGA 
GCAACAGCCC CACCTGCCCC CTCAGCCCCA AATTCTGCTC CCAGCAACTT GGGCCCCCAG 
ACCGTACTGG AGGTCCCAGC CCGGAGCACC TTCTGGGGGC CCCAGCCCTG GGAGGGGAGG 
CCCCCCGCCA CAGGCCTGGT GAGCTGGGCT GAACCCGAGC AGAGGCCAGA GGCCAGCGTC 
CAGTTTGGGA GCCCCCAGGC CAGGAGGCAG CGGCCAGGGA GCCCGGATCC TGAGTGGGGC 
CTCCAGCCAC GGGTCACCTT GGAGCAGATC TCAGCTTTCT GGAAGCGTGA AGGCCGGACC 
AGTGTGGGGT TCTGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

CloneID OHu07424
Clone ID Related Accession (Same CDS sequence) NM_175900.4 , NM_175900.3
Accession Version NM_175900.3 Documents for ORF clone product in default vector
Sequence Information ORF Nucleotide Sequence (Length: 675bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ™ Seamless cloning technology
Insert Structure linear
Update Date 2017-10-01
Organism Homo sapiens(human)
Product transmembrane protein C16orf54
Comment Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from DA427069.1, BC104466.2, BC025741.1 and AC009133.7. On or before Mar 27, 2009 this sequence version replaced XM_001128758.1, NM_175900.2. ##Evidence-Data-START## Transcript exon combination :: BC025741.1, AK093000.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA2153031, SAMEA2155770 [ECO:0000348] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. 

1
61
121
181
241
301
361
421
481
541
601
661
ATGCCGTTGA CTCCAGAGCC GCCCTCTGGG CGCGTGGAGG GGCCCCCCGC ATGGGAAGCA 
GCCCCATGGC CCTCACTGCC CTGTGGGCCC TGCATCCCCA TCATGCTGGT CCTGGCCACC 
CTGGCTGCGC TCTTCATCCT CACCACCGCT GTGTTGGCTG AACGCCTGTT CCGCCGTGCT 
CTCCGCCCAG ACCCCAGCCA CCGTGCACCC ACCCTGGTGT GGCGCCCAGG AGGAGAGCTG 
TGGATTGAGC CCATGGGCAC CGCCCGAGAG CGCTCTGAGG ACTGGTATGG CTCTGCGGTC 
CCCCTGCTGA CAGATCGGGC CCCTGAGCCT CCCACCCAGG TGGGCACTTT GGAGGCCCGA 
GCAACAGCCC CACCTGCCCC CTCAGCCCCA AATTCTGCTC CCAGCAACTT GGGCCCCCAG 
ACCGTACTGG AGGTCCCAGC CCGGAGCACC TTCTGGGGGC CCCAGCCCTG GGAGGGGAGG 
CCCCCCGCCA CAGGCCTGGT GAGCTGGGCT GAACCCGAGC AGAGGCCAGA GGCCAGCGTC 
CAGTTTGGGA GCCCCCAGGC CAGGAGGCAG CGGCCAGGGA GCCCGGATCC TGAGTGGGGC 
CTCCAGCCAC GGGTCACCTT GGAGCAGATC TCAGCTTTCT GGAAGCGTGA AGGCCGGACC 
AGTGTGGGGT TCTGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq NP_787096.2
CDS110..784
Translation

Target ORF information:

RefSeq Version NM_175900.3
Organism Homo sapiens(human)
Definition Homo sapiens chromosome 16 open reading frame 54 (C16orf54), mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
 NM_175900.3

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
601
661
ATGCCGTTGA CTCCAGAGCC GCCCTCTGGG CGCGTGGAGG GGCCCCCCGC ATGGGAAGCA 
GCCCCATGGC CCTCACTGCC CTGTGGGCCC TGCATCCCCA TCATGCTGGT CCTGGCCACC 
CTGGCTGCGC TCTTCATCCT CACCACCGCT GTGTTGGCTG AACGCCTGTT CCGCCGTGCT 
CTCCGCCCAG ACCCCAGCCA CCGTGCACCC ACCCTGGTGT GGCGCCCAGG AGGAGAGCTG 
TGGATTGAGC CCATGGGCAC CGCCCGAGAG CGCTCTGAGG ACTGGTATGG CTCTGCGGTC 
CCCCTGCTGA CAGATCGGGC CCCTGAGCCT CCCACCCAGG TGGGCACTTT GGAGGCCCGA 
GCAACAGCCC CACCTGCCCC CTCAGCCCCA AATTCTGCTC CCAGCAACTT GGGCCCCCAG 
ACCGTACTGG AGGTCCCAGC CCGGAGCACC TTCTGGGGGC CCCAGCCCTG GGAGGGGAGG 
CCCCCCGCCA CAGGCCTGGT GAGCTGGGCT GAACCCGAGC AGAGGCCAGA GGCCAGCGTC 
CAGTTTGGGA GCCCCCAGGC CAGGAGGCAG CGGCCAGGGA GCCCGGATCC TGAGTGGGGC 
CTCCAGCCAC GGGTCACCTT GGAGCAGATC TCAGCTTTCT GGAAGCGTGA AGGCCGGACC 
AGTGTGGGGT TCTGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

PubMed

book

The secreted protein discovery initiative (SPDI), a large-scale effort to identify novel human secreted and transmembrane proteins: a bioinformatics assessment.
Genome research13(10)2265-70(2003 Oct)
Clark HF,Gurney AL,Abaya E,Baker K,Baldwin D,Brush J,Chen J,Chow B,Chui C,Crowley C,Currell B,Deuel B,Dowd P,Eaton D,Foster J,Grimaldi C,Gu Q,Hass PE,Heldens S,Huang A,Kim HS,Klimowski L,Jin Y,Johnson S,Lee J,Lewis L,Liao D,Mark M,Robbie E,Sanchez C,Schoenfeld J,Seshagiri S,Simmons L,Singh J,Smith V,Stinson J,Vagts A,Vandlen R,Watanabe C,Wieand D,Woods K,Xie MH,Yansura D,Yi S,Yu G,Yuan J,Zhang M,Zhang Z,Goddard A,Wood WI,Godowski P,Gray A


book

Genome duplications and other features in 12 Mb of DNA sequence from human chromosome 16p and 16q.
Genomics60(3)295-308(1999 Sep)
Loftus BJ,Kim UJ,Sneddon VP,Kalush F,Brandon R,Fuhrmann J,Mason T,Crosby ML,Barnstead M,Cronin L,Deslattes Mays A,Cao Y,Xu RX,Kang HL,Mitchell S,Eichler EE,Harris PC,Venter JC,Adams MD