ORF cDNA Clones and Custom Clones » Species Summary » Danio rerio » snrpa cDNA ORF clone

snrpa cDNA ORF clone, Danio rerio(zebrafish)

Collapse all
Expand all

Summary

Gene Symbol	snrpa
Entrez Gene ID	324121
Full Name	small nuclear ribonucleoprotein polypeptide A
Synonyms	fc19d01,wu:fc19d01,zgc:77810
General protein information	Preferred Names small nuclear ribonucleoprotein polypeptide A Names U1 small nuclear ribonucleoprotein A
Gene Type	protein-coding
Organism	Danio rerio(zebrafish)

Reference Sequences (RefSeq)

mRNA and Protein(s)

mRNA	Protein	Name
NM_199671.1	NP_955965.1	U1 small nuclear ribonucleoprotein A

Homologies

Canis lupus familiaris (dog)	SNRPA	XP_533663.2
Anopheles gambiae (African malaria mosquito)	AgaP_AGAP011637	XP_320869.2
Oryza sativa (rice)	Os05g0154800	NP_001054685.1
Bos taurus (cattle)	SNRPA	NP_001039504.1
Homo sapiens (human)	SNRPA	NP_004587.1
Rattus norvegicus (Norway rat)	Snrpa	NP_001008304.1
Danio rerio (zebrafish)	snrpa	NP_955965.1
Caenorhabditis elegans (roundworm)	rnp-2	NP_500504.1
Schizosaccharomyces pombe (fission yeast)	usp102	NP_596424.1
Pan troglodytes (chimpanzee)	SNRPA	XP_512674.2
	SNRPA	XP_001098504.1
Drosophila melanogaster (fruit fly)	snf	NP_511045.1
Neurospora crassa	NCU08034	XP_962704.1
Magnaporthe oryzae (rice blast fungus)	MGG_07085	XP_003715274.1
Arabidopsis thaliana (thale cress)	U1A	NP_182280.1
Xenopus tropicalis (tropical clawed frog)	snrpa	NP_001016784.1

Bibliography

Related articles in PubMed

Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database.
Pasquier J, Cabau C, Nguyen T, Jouanno E, Severac D, Braasch I, Journot L, Pontarotti P, Klopp C, Postlethwait JH, Guiguen Y, Bobe J
BMC genomics17368(2016 05)

RFX transcription factors are essential for hearing in mice.
Elkon R, Milon B, Morrison L, Shah M, Vijayakumar S, Racherla M, Leitch CC, Silipino L, Hadi S, Weiss-Gayet M, Barras E, Schmid CD, Ait-Lounis A, Barnes A, Song Y, Eisenman DJ, Eliyahu E, Frolenkov GI, Strome SE, Durand B, Zaghloul NA, Jones SM, Reith W, Hertzano R
Nature communications68549(2015 Oct)

Comparative analysis of the testis and ovary transcriptomes in zebrafish by combining experimental and computational tools.
Li Y, Chia JM, Bartfai R, Christoffels A, Yue GH, Ding K, Ho MY, Hill JA, Stupka E, Orban L
Comparative and functional genomics5(5)403-18(2004)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

Collapse all
Expand all

The following snrpa gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the snrpa cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

Collapse all
Expand all

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
ODa30540	NM_199671.1 Latest version!	Danio rerio small nuclear ribonucleoprotein polypeptide A (snrpa), mRNA.	pcDNA3.1⁺/C-(K)DYK or customized vector	7-9	$174.30 $249.00

ORF Online Only Promotion

Next-day Shipping ORF Clones ( in default vector with tag)
1 Clone	30% OFF
2-4 Clone	40% OFF
5 or more Clone	50% OFF
All Other ORF Clones
30% OFF

*Business Day

** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

snrpa ( NM_199671.1 ) cDNA ORF clone, Danio rerio(zebrafish) -> NP_955965.1 Danio rerio small nuclear ribonucleoprotein polypeptide A (snrpa), mRNA.

Price & Availability↑

CloneID	ODa30540
Clone ID Related Accession (Same CDS sequence)	NM_199671.1
Accession Version	NM_199671.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 846bp) Protein sequence SNP
Vector	pcDNA3.1⁺/C-(K)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2018-11-23
Organism	Danio rerio(zebrafish)
Product	U1 small nuclear ribonucleoprotein A
Comment	Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC064308.1. ##Evidence-Data-START## Transcript exon combination :: BC064308.1, EH537525.1 [ECO:0000332] RNAseq introns :: mixed/partial sample support SAMEA2168446, SAMEA2168447 [ECO:0000350] ##Evidence-Data-END##

ATGGCGGGCC AGGAGATGAG ACTAAACCAC ACCATTTACA TTAACAACTT GAATGAGAAG 
ATCAAAAAAG ACGAGCTGAA AAAGTCATTG TATGCTATAT TCTCACAGTT TGGCCAAATC 
CTGGACATCC TTGTTTCTCG TACACTGAAA ATGAAGGGTC AGGCCTTTGT GATCTTCAAA 
GAGATCAACA GTGCTTCCAA CGCCCTCCGT TCAATGCAGG GCTTCCCATT TTATGACAAA 
CCCATGCGTA TTCAGTATTC AAAGCAGGAC TCTGATATCA TTGCAAAAAT GAAAGGAACA 
TTTGTGGAGC GAGACCGTAA GAAAGAGAAG AAGAAGCCTA AAGTCCCAGA AGCTGGTGCC 
GGGAAGAAGG GAGGTTCTGG TGCCACCCCT GCTATGGCTG GAGTACCTGC TGCTATTCCT 
GGAATGCCAC CTATGAGTCA AGCTCCTCGC ATGATGCCAA TGCCTGGCCA GCCTCCCTAC 
ATGCCTCCTC CTGGTATGAT GCCTCCACCA AACATGGCAC CCGGACAGAT GCCTCCAGGT 
GCCATGCCAC CAGGTGGGAT GATGCCAGGA CAAATGCCAG GCCAGATGCC ACAGCAGGTG 
TCGGAAAACC CTCCCAACCA CATCCTGTTC CTCACCAATC TCCCAGAGGA GACCAACGAG 
CTCATGCTGT CCATGTTGTT CAACCAGTTC CCTGGATTCA AGGAAGTTCG TCTTGTCCCT 
GGCCGCCACG ATATCGCCTT TGTGGAGTTT GATAATGAGG TGCAGGCCGG AGCAGCCAGA 
GAAGCTTTGC AAGGCTTTAA GATCACACAG AGCAATGCTA TGAAAATCTC TTTCGCAAAG 
AAATAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_955965.1
CDS	43..888
Translation	MAGQEMRLNHTIYINNLNEKIKKDELKKSLYAIFSQFGQILDILVSRTLKMKGQAFVIFKEINSASNALRSMQGFPFYDKPMRIQYSKQDSDIIAKMKGTFVERDRKKEKKKPKVPEAGAGKKGGSGATPAMAGVPAAIPGMPPMSQAPRMMPMPGQPPYMPPPGMMPPPNMAPGQMPPGAMPPGGMMPGQMPGQMPQQVSENPPNHILFLTNLPEETNELMLSMLFNQFPGFKEVRLVPGRHDIAFVEFDNEVQAGAAREALQGFKITQSNAMKISFAKK

Target ORF information:

RefSeq Version	NM_199671.1
Organism	Danio rerio(zebrafish)
Definition	Danio rerio small nuclear ribonucleoprotein polypeptide A (snrpa), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_199671.1

ORF Insert Sequence:

ATGGCGGGCC AGGAGATGAG ACTAAACCAC ACCATTTACA TTAACAACTT GAATGAGAAG 
ATCAAAAAAG ACGAGCTGAA AAAGTCATTG TATGCTATAT TCTCACAGTT TGGCCAAATC 
CTGGACATCC TTGTTTCTCG TACACTGAAA ATGAAGGGTC AGGCCTTTGT GATCTTCAAA 
GAGATCAACA GTGCTTCCAA CGCCCTCCGT TCAATGCAGG GCTTCCCATT TTATGACAAA 
CCCATGCGTA TTCAGTATTC AAAGCAGGAC TCTGATATCA TTGCAAAAAT GAAAGGAACA 
TTTGTGGAGC GAGACCGTAA GAAAGAGAAG AAGAAGCCTA AAGTCCCAGA AGCTGGTGCC 
GGGAAGAAGG GAGGTTCTGG TGCCACCCCT GCTATGGCTG GAGTACCTGC TGCTATTCCT 
GGAATGCCAC CTATGAGTCA AGCTCCTCGC ATGATGCCAA TGCCTGGCCA GCCTCCCTAC 
ATGCCTCCTC CTGGTATGAT GCCTCCACCA AACATGGCAC CCGGACAGAT GCCTCCAGGT 
GCCATGCCAC CAGGTGGGAT GATGCCAGGA CAAATGCCAG GCCAGATGCC ACAGCAGGTG 
TCGGAAAACC CTCCCAACCA CATCCTGTTC CTCACCAATC TCCCAGAGGA GACCAACGAG 
CTCATGCTGT CCATGTTGTT CAACCAGTTC CCTGGATTCA AGGAAGTTCG TCTTGTCCCT 
GGCCGCCACG ATATCGCCTT TGTGGAGTTT GATAATGAGG TGCAGGCCGG AGCAGCCAGA 
GAAGCTTTGC AAGGCTTTAA GATCACACAG AGCAATGCTA TGAAAATCTC TTTCGCAAAG 
AAATAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database.
BMC genomics17368(2016 05)
Pasquier J,Cabau C,Nguyen T,Jouanno E,Severac D,Braasch I,Journot L,Pontarotti P,Klopp C,Postlethwait JH,Guiguen Y,Bobe J

RFX transcription factors are essential for hearing in mice.
Nature communications68549(2015 Oct)
Elkon R,Milon B,Morrison L,Shah M,Vijayakumar S,Racherla M,Leitch CC,Silipino L,Hadi S,Weiss-Gayet M,Barras E,Schmid CD,Ait-Lounis A,Barnes A,Song Y,Eisenman DJ,Eliyahu E,Frolenkov GI,Strome SE,Durand B,Zaghloul NA,Jones SM,Reith W,Hertzano R

Comparative analysis of the testis and ovary transcriptomes in zebrafish by combining experimental and computational tools.
Comparative and functional genomics5(5)403-18(2004)
Li Y,Chia JM,Bartfai R,Christoffels A,Yue GH,Ding K,Ho MY,Hill JA,Stupka E,Orban L

Collapse all
Expand all

snrpa cDNA ORF clone, Danio rerio(zebrafish)

Summary

Reference Sequences (RefSeq)

Pathways from BioSystems

Homologies

Gene Ontology

Bibliography

Reference Sequences (Refseq)

Target ORF information:

Target ORF information:

ORF Insert Sequence:

PubMed

Resources

Support

Company

Shopping Tools