cstf1 cDNA ORF clone, Danio rerio(zebrafish)
| Gene Symbol | cstf1 |
| Entrez Gene ID | 324238 |
| Full Name | cleavage stimulation factor, 3' pre-RNA, subunit 1 |
| Synonyms | fc22d10,wu:fc22d10,wu:fd16h09,zgc:66207,zgc:77560 |
| General protein information |
|
| Gene Type | protein-coding |
| Organism | Danio rerio(zebrafish) |
mRNA and Protein(s)
| mRNA | Protein | Name |
|---|---|---|
| NM_001328559.1 | NP_001315488.1 | cleavage stimulation factor subunit 1 |
| Canis lupus familiaris (dog) | CSTF1 | XP_867360.1 |
| Bos taurus (cattle) | CSTF1 | NP_001071333.1 |
| Danio rerio (zebrafish) | cstf1 | NP_997835.1 |
| Arabidopsis thaliana (thale cress) | AT5G60940 | NP_200902.1 |
| Pan troglodytes (chimpanzee) | CSTF1 | NP_001233291.1 |
| Xenopus tropicalis (tropical clawed frog) | cstf1 | NP_001001220.1 |
| Homo sapiens (human) | CSTF1 | NP_001028693.1 |
| Rattus norvegicus (Norway rat) | Cstf1 | NP_001013179.1 |
| Drosophila melanogaster (fruit fly) | CstF-50 | NP_651883.1 |
| Oryza sativa (rice) | Os03g0754900 | NP_001051309.1 |
| Mus musculus (house mouse) | Cstf1 | NP_077161.1 |
| Gallus gallus (chicken) | CSTF1 | XP_004947290.1 |
| Anopheles gambiae (African malaria mosquito) | AgaP_AGAP002776 | XP_312148.3 |
| Caenorhabditis elegans (roundworm) | cpf-1 | NP_495822.1 |
Related articles in PubMed
Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database.
Pasquier J, Cabau C, Nguyen T, Jouanno E, Severac D, Braasch I, Journot L, Pontarotti P, Klopp C, Postlethwait JH, Guiguen Y, Bobe J
BMC genomics17368(2016 05)
RFX transcription factors are essential for hearing in mice.
Elkon R, Milon B, Morrison L, Shah M, Vijayakumar S, Racherla M, Leitch CC, Silipino L, Hadi S, Weiss-Gayet M, Barras E, Schmid CD, Ait-Lounis A, Barnes A, Song Y, Eisenman DJ, Eliyahu E, Frolenkov GI, Strome SE, Durand B, Zaghloul NA, Jones SM, Reith W, Hertzano R
Nature communications68549(2015 Oct)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following cstf1 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the cstf1 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
| CloneID | ODa17067 | |
| Clone ID Related Accession (Same CDS sequence) | NM_001328559.1 | |
| Accession Version | NM_001328559.1 Latest version! | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 1296bp) Protein sequence SNP |
|
| Vector | pcDNA3.1+/C-(K)DYK or customized vector |  User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 2018-11-23 | |
| Organism | Danio rerio(zebrafish) | |
| Product | cleavage stimulation factor subunit 1 | |
| Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from BX601648.8, EH592404.1 and EH556892.1. On Jun 18, 2016 this sequence version replaced XM_005169252.2. Sequence Note: This RefSeq record was created from transcript and genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments. ##Evidence-Data-START## Transcript exon combination :: GDQH01009568.1, BC066520.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA2168446, SAMEA2168447 [ECO:0000348] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. | |
1 | ATGTTTCGAC CCAAACCCAC ACTGAAGGAC AGACAGCATC TGTACAAGCT GATCATCAGT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | NP_001315488.1 |
| CDS | 71..1366 |
| Translation |
Target ORF information:
Target ORF information:
|
 NM_001328559.1 |
ORF Insert Sequence:
1 | ATGTTTCGAC CCAAACCCAC ACTGAAGGAC AGACAGCATC TGTACAAGCT GATCATCAGT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
 |
Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database. |
|
RFX transcription factors are essential for hearing in mice. |