Gene Symbol
MATK
Entrez Gene ID
4145
Full Name
megakaryocyte-associated tyrosine kinase
Synonyms
CHK,CTK,HHYLTK,HYL,HYLTK,Lsk
General protein information
Preferred Namesmegakaryocyte-associated tyrosine kinase
Namesmegakaryocyte-associated tyrosine-protein kinase CSK homologous kinase Csk-homologous kinase Csk-type protein tyrosine kinase HYL tyrosine kinase hematopoietic consensus tyrosine-lacking kinase hydroxyaryl-protein kinase leukocyte carboxyl-terminal src kinase related protein kinase HYL tyrosine kinase MATK tyrosine-protein kinase CTK tyrosylprotein kinase
Gene Type
protein-coding
Organism
Homo sapiens(human)
Genome
Chromosome: 19
Map Location: 19p13.3
Summary
The protein encoded by this gene has amino acid sequence similarity to Csk tyrosine kinase and has the structural features of the CSK subfamily: SRC homology SH2 and SH3 domains, a catalytic domain, a unique N terminus, lack of myristylation signals, lack of a negative regulatory phosphorylation site, and lack of an autophosphorylation site. This protein is thought to play a significant role in the signal transduction of hematopoietic cells. It is able to phosphorylate and inactivate Src family kinases, and may play an inhibitory role in the control of T-cell proliferation. This protein might be involved in signaling in some cases of breast cancer. Three alternatively spliced transcript variants that encode different isoforms have been described for this gene. [provided by RefSeq, Jul 2008].
Disorder MIM:
600038
mRNA and Protein(s)
mRNA
Protein
Name
XM_011528018.1
XP_011526320.1
megakaryocyte-associated tyrosine-protein kinase isoform X1
NM_139355.2
NP_647612.1
megakaryocyte-associated tyrosine-protein kinase isoform a
NM_002378.3
NP_002369.2
megakaryocyte-associated tyrosine-protein kinase isoform b
NM_139354.2
NP_647611.1
megakaryocyte-associated tyrosine-protein kinase isoform c
Canis lupus familiaris (dog)
MATK
XP_005633123.1
Mus musculus (house mouse)
Matk
NP_034898.1
Rattus norvegicus (Norway rat)
Matk
NP_068631.1
Danio rerio (zebrafish)
matk
XP_695792.1
Xenopus tropicalis (tropical clawed frog)
matk
XP_002941433.1
Homo sapiens (human)
MATK
NP_647612.1
Bos taurus (cattle)
MATK
NP_001030183.1
Gallus gallus (chicken)
MATK
XP_004948733.1
Pan troglodytes (chimpanzee)
LOC455592
XP_512276.3
Related articles in PubMed
Differential protein-protein interactions of LRRK1 and LRRK2 indicate roles in distinct cellular signaling pathways.
Reyniers L, Del Giudice MG, Civiero L, Belluzzi E, Lobbestael E, Beilina A, Arrigoni G, Derua R, Waelkens E, Li Y, Crosio C, Iaccarino C, Cookson MR, Baekelandt V, Greggio E, Taymans JM Journal of neurochemistry131(2)239-50(2014 Oct)
Enhanced prediction of Src homology 2 (SH2) domain binding potentials using a fluorescence polarization-derived c-Met, c-Kit, ErbB, and androgen receptor interactome.
Leung KK, Hause RJ Jr, Barkinge JL, Ciaccio MF, Chuu CP, Jones RB Molecular & cellular proteomics : MCP13(7)1705-23(2014 Jul)
Unbiased screen for interactors of leucine-rich repeat kinase 2 supports a common pathway for sporadic and familial Parkinson disease.
Beilina A, Rudenko IN, Kaganovich A, Civiero L, Chau H, Kalia SK, Kalia LV, Lobbestael E, Chia R, Ndukwe K, Ding J, Nalls MA, , , Olszewski M, Hauser DN, Kumaran R, Lozano AM, Baekelandt V, Greene LE, Taymans JM, Greggio E, Cookson MR Proceedings of the National Academy of Sciences of the United States of America111(7)2626-31(2014 Feb)
Quantitative analysis of HSP90-client interactions reveals principles of substrate recognition.
Taipale M, Krykbaeva I, Koeva M, Kayatekin C, Westover KD, Karras GI, Lindquist S Cell150(5)987-1001(2012 Aug)
Novel genetic loci identified for the pathophysiology of childhood obesity in the Hispanic population.
Comuzzie AG, Cole SA, Laston SL, Voruganti VS, Haack K, Gibbs RA, Butte NF PloS one7(12)e51954(2012)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following MATK gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the MATK cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+ /C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID
OHu06309
Clone ID Related Accession (Same CDS sequence)
XM_011528018.1
, NM_139355.2
Accession Version
NM_139355.2 Latest version!
Documents for ORF clone product in dufault vector
Sequence Information
ORF Nucleotide Sequence (Length: 1524bp)
Protein sequence
SNP
Vector
pcDNA3.1+ /C-(K)DYK or customized vector
User Manual
Clone information
Clone Map
MSDS
Tag on pcDNA3.1+ /C-(K)DYK
C terminal DYKDDDDK tags
COA
ORF Insert Method
CloneEZ® Seamless cloning technology
Insert Structure
linear
Update Date
2017-10-02
Organism
Homo sapiens(human)
Product
megakaryocyte-associated tyrosine-protein kinase isoform a
Comment
Comment: REVIEWED REFSEQ: This record has been curated by NCBI staff. The reference sequence was derived from BG396388.1, BM925586.1, BC000114.1 and X77278.1. On Aug 4, 2006 this sequence version replaced NM_139355.1.
Transcript Variant: This variant (1) encodes the predominant isoform a.
Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications.
##Evidence-Data-START##
Transcript exon combination :: X77278.1, BC000114.1 [ECO:0000332]
RNAseq introns :: mixed/partial sample support SAMEA1965299, SAMEA1966682 [ECO:0000350]
##Evidence-Data-END##
COMPLETENESS: complete on the 3' end.
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021 1081 1141 1201 1261 1321 1381 1441 1501 ATGGCGGGGC GAGGCTCTCT GGTTTCCTGG CGGGCATTTC ACGGCTGTGA TTCTGCTGAG GAACTTCCCC GGGTGAGCCC CCGCTTCCTC CGAGCCTGGC ACCCCCCTCC CGTCTCAGCC AGGATGCCAA CGAGGCGCTG GGCCCCGGGC ACCCAGTGTA TCACCAAATG CGAGCACACC CGCCCCAAGC CAGGGGAGCT GGCCTTCCGC AAGGGCGACG TGGTCACCAT CCTGGAGGCC TGCGAGAACA AGAGCTGGTA CCGCGTCAAG CACCACACCA GTGGACAGGA GGGGCTGCTG GCAGCTGGGG CGCTGCGGGA GCGGGAGGCC CTCTCCGCAG ACCCCAAGCT CAGCCTCATG CCGTGGTTCC ACGGGAAGAT CTCGGGCCAG GAGGCTGTCC AGCAGCTGCA GCCTCCCGAG GATGGGCTGT TCCTGGTGCG GGAGTCCGCG CGCCACCCCG GCGACTACGT CCTGTGCGTG AGCTTTGGCC GCGACGTCAT CCACTACCGC GTGCTGCACC GCGACGGCCA CCTCACAATC GATGAGGCCG TGTTCTTCTG CAACCTCATG GACATGGTGG AGCATTACAG CAAGGACAAG GGCGCTATCT GCACCAAGCT GGTGAGACCA AAGCGGAAAC ACGGGACCAA GTCGGCCGAG GAGGAGCTGG CCAGGGCGGG CTGGTTACTG AACCTGCAGC ATTTGACATT GGGAGCACAG ATCGGAGAGG GAGAGTTTGG AGCTGTCCTG CAGGGTGAGT ACCTGGGGCA AAAGGTGGCC GTGAAGAATA TCAAGTGTGA TGTGACAGCC CAGGCCTTCC TGGACGAGAC GGCCGTCATG ACGAAGATGC AACACGAGAA CCTGGTGCGT CTCCTGGGCG TGATCCTGCA CCAGGGGCTG TACATTGTCA TGGAGCACGT GAGCAAGGGC AACCTGGTGA ACTTTCTGCG GACCCGGGGT CGAGCCCTCG TGAACACCGC TCAGCTCCTG CAGTTTTCTC TGCACGTGGC CGAGGGCATG GAGTACCTGG AGAGCAAGAA GCTTGTGCAC CGCGACCTGG CCGCCCGCAA CATCCTGGTC TCAGAGGACC TGGTGGCCAA GGTCAGCGAC TTTGGCCTGG CCAAAGCCGA GCGGAAGGGG CTAGACTCAA GCCGGCTGCC CGTCAAGTGG ACGGCGCCCG AGGCTCTCAA ACACGGGAAG TTCACCAGCA AGTCGGATGT CTGGAGTTTT GGGGTGCTGC TCTGGGAGGT CTTCTCATAT GGACGGGCTC CGTACCCTAA AATGTCACTG AAAGAGGTGT CGGAGGCCGT GGAGAAGGGG TACCGCATGG AACCCCCCGA GGGCTGTCCA GGCCCCGTGC ACGTCCTCAT GAGCAGCTGC TGGGAGGCAG AGCCCGCCCG CCGGCCACCC TTCCGCAAAC TGGCCGAGAA GCTGGCCCGG GAGCTACGCA GTGCAGGTGC CCCAGCCTCC GTCTCAGGGC AGGACGCCGA CGGCTCCACC TCGCCCCGAA GCCAGGAGCC CTGA
The stop codons will be deleted if pcDNA3.1+ /C-(K)DYK vector is selected.
RefSeq
NP_647612.1
CDS 401..1924
Misc Feature(1) 548..724
Misc Feature(2) 560..715
Misc Feature(3) order(569..571,575..577,584..586,596..598,653..658,701..703,707..712)
Misc Feature(4) 752..1045
Misc Feature(5) 764..1036
Misc Feature(6) order(785..787,839..841,902..904,908..910)
Misc Feature(7) order(905..907,986..988)
Misc Feature(8) 1082..1843
Misc Feature(9) 1103..1834
Misc Feature(10) 1103..1834
Misc Feature(11) order(1121..1129,1145..1147,1178..1180,1184..1186,1265..1267,1310..1321,1328..1333,1454..1456,1466..1471,1475..1477,1505..1510,1547..1561,1586..1588,1688..1690)
Misc Feature(12) order(1121..1129,1145..1147,1178..1180,1184..1186,1265..1267,1310..1321,1328..1333,1466..1471,1475..1477,1505..1510)
Misc Feature(13) order(1163..1165,1196..1198,1232..1234,1241..1246,1250..1252,1289..1291)
Misc Feature(14) order(1454..1456,1466..1468,1547..1561,1586..1588,1688..1690)
Misc Feature(15) 1505..1567
Misc Feature(16) 1901..1903
Exon (1) 1..249
Exon (2) 250..472
Exon (3) 473..532
Exon (4) 533..646
Exon (5) 647..762
Exon (6) 763..982
Exon (7) 983..1076
Exon (8) 1077..1142
Exon (9) 1143..1242
Exon (10) 1243..1327
Exon (11) 1328..1401
Exon (12) 1402..1597
Exon (13) 1598..1684
Exon (14) 1685..2138
Translation
Target ORF information:
RefSeq Version NM_139355.2
Organism Homo sapiens(human)
Definition Homo sapiens megakaryocyte-associated tyrosine kinase (MATK), transcript variant 1, mRNA.
Target ORF information:
Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+ /C-(K)DYK
NM_139355.2
ORF Insert Sequence:
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021 1081 1141 1201 1261 1321 1381 1441 1501 ATGGCGGGGC GAGGCTCTCT GGTTTCCTGG CGGGCATTTC ACGGCTGTGA TTCTGCTGAG GAACTTCCCC GGGTGAGCCC CCGCTTCCTC CGAGCCTGGC ACCCCCCTCC CGTCTCAGCC AGGATGCCAA CGAGGCGCTG GGCCCCGGGC ACCCAGTGTA TCACCAAATG CGAGCACACC CGCCCCAAGC CAGGGGAGCT GGCCTTCCGC AAGGGCGACG TGGTCACCAT CCTGGAGGCC TGCGAGAACA AGAGCTGGTA CCGCGTCAAG CACCACACCA GTGGACAGGA GGGGCTGCTG GCAGCTGGGG CGCTGCGGGA GCGGGAGGCC CTCTCCGCAG ACCCCAAGCT CAGCCTCATG CCGTGGTTCC ACGGGAAGAT CTCGGGCCAG GAGGCTGTCC AGCAGCTGCA GCCTCCCGAG GATGGGCTGT TCCTGGTGCG GGAGTCCGCG CGCCACCCCG GCGACTACGT CCTGTGCGTG AGCTTTGGCC GCGACGTCAT CCACTACCGC GTGCTGCACC GCGACGGCCA CCTCACAATC GATGAGGCCG TGTTCTTCTG CAACCTCATG GACATGGTGG AGCATTACAG CAAGGACAAG GGCGCTATCT GCACCAAGCT GGTGAGACCA AAGCGGAAAC ACGGGACCAA GTCGGCCGAG GAGGAGCTGG CCAGGGCGGG CTGGTTACTG AACCTGCAGC ATTTGACATT GGGAGCACAG ATCGGAGAGG GAGAGTTTGG AGCTGTCCTG CAGGGTGAGT ACCTGGGGCA AAAGGTGGCC GTGAAGAATA TCAAGTGTGA TGTGACAGCC CAGGCCTTCC TGGACGAGAC GGCCGTCATG ACGAAGATGC AACACGAGAA CCTGGTGCGT CTCCTGGGCG TGATCCTGCA CCAGGGGCTG TACATTGTCA TGGAGCACGT GAGCAAGGGC AACCTGGTGA ACTTTCTGCG GACCCGGGGT CGAGCCCTCG TGAACACCGC TCAGCTCCTG CAGTTTTCTC TGCACGTGGC CGAGGGCATG GAGTACCTGG AGAGCAAGAA GCTTGTGCAC CGCGACCTGG CCGCCCGCAA CATCCTGGTC TCAGAGGACC TGGTGGCCAA GGTCAGCGAC TTTGGCCTGG CCAAAGCCGA GCGGAAGGGG CTAGACTCAA GCCGGCTGCC CGTCAAGTGG ACGGCGCCCG AGGCTCTCAA ACACGGGAAG TTCACCAGCA AGTCGGATGT CTGGAGTTTT GGGGTGCTGC TCTGGGAGGT CTTCTCATAT GGACGGGCTC CGTACCCTAA AATGTCACTG AAAGAGGTGT CGGAGGCCGT GGAGAAGGGG TACCGCATGG AACCCCCCGA GGGCTGTCCA GGCCCCGTGC ACGTCCTCAT GAGCAGCTGC TGGGAGGCAG AGCCCGCCCG CCGGCCACCC TTCCGCAAAC TGGCCGAGAA GCTGGCCCGG GAGCTACGCA GTGCAGGTGC CCCAGCCTCC GTCTCAGGGC AGGACGCCGA CGGCTCCACC TCGCCCCGAA GCCAGGAGCC CTGA
The stop codons will be deleted if pcDNA3.1+ /C-(K)DYK vector is selected.
CloneID
OHu06310
Clone ID Related Accession (Same CDS sequence)
NM_139354.2
Accession Version
NM_139354.2 Latest version!
Documents for ORF clone product in dufault vector
Sequence Information
ORF Nucleotide Sequence (Length: 1401bp)
Protein sequence
SNP
Vector
pcDNA3.1+ /C-(K)DYK or customized vector
User Manual
Clone information
Clone Map
MSDS
Tag on pcDNA3.1+ /C-(K)DYK
C terminal DYKDDDDK tags
COA
ORF Insert Method
CloneEZ® Seamless cloning technology
Insert Structure
linear
Update Date
2017-10-02
Organism
Homo sapiens(human)
Product
megakaryocyte-associated tyrosine-protein kinase isoform c
Comment
Comment: REVIEWED REFSEQ: This record has been curated by NCBI staff. The reference sequence was derived from BG396388.1, BQ109562.1, AL137754.1 and X77278.1. On Aug 4, 2006 this sequence version replaced NM_139354.1.
Transcript Variant: This variant (3) lacks an exon in the coding region, and utilizes a downstream in-frame start codon, compared to variant 1. Isoform c has a shorter N-terminus, compared to isoform a.
Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications.
##Evidence-Data-START##
Transcript exon combination :: AL137754.1, AK225834.1 [ECO:0000332]
RNAseq introns :: mixed/partial sample support SAMEA1965299, SAMEA1966682 [ECO:0000350]
##Evidence-Data-END##
COMPLETENESS: complete on the 3' end.
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021 1081 1141 1201 1261 1321 1381 ATGCCAACGA GGCGCTGGGC CCCGGGCACC CAGTGTATCA CCAAATGCGA GCACACCCGC CCCAAGCCAG GGGAGCTGGC CTTCCGCAAG GGCGACGTGG TCACCATCCT GGAGGCCTGC GAGAACAAGA GCTGGTACCG CGTCAAGCAC CACACCAGTG GACAGGAGGG GCTGCTGGCA GCTGGGGCGC TGCGGGAGCG GGAGGCCCTC TCCGCAGACC CCAAGCTCAG CCTCATGCCG TGGTTCCACG GGAAGATCTC GGGCCAGGAG GCTGTCCAGC AGCTGCAGCC TCCCGAGGAT GGGCTGTTCC TGGTGCGGGA GTCCGCGCGC CACCCCGGCG ACTACGTCCT GTGCGTGAGC TTTGGCCGCG ACGTCATCCA CTACCGCGTG CTGCACCGCG ACGGCCACCT CACAATCGAT GAGGCCGTGT TCTTCTGCAA CCTCATGGAC ATGGTGGAGC ATTACAGCAA GGACAAGGGC GCTATCTGCA CCAAGCTGGT GAGACCAAAG CGGAAACACG GGACCAAGTC GGCCGAGGAG GAGCTGGCCA GGGCGGGCTG GTTACTGAAC CTGCAGCATT TGACATTGGG AGCACAGATC GGAGAGGGAG AGTTTGGAGC TGTCCTGCAG GGTGAGTACC TGGGGCAAAA GGTGGCCGTG AAGAATATCA AGTGTGATGT GACAGCCCAG GCCTTCCTGG ACGAGACGGC CGTCATGACG AAGATGCAAC ACGAGAACCT GGTGCGTCTC CTGGGCGTGA TCCTGCACCA GGGGCTGTAC ATTGTCATGG AGCACGTGAG CAAGGGCAAC CTGGTGAACT TTCTGCGGAC CCGGGGTCGA GCCCTCGTGA ACACCGCTCA GCTCCTGCAG TTTTCTCTGC ACGTGGCCGA GGGCATGGAG TACCTGGAGA GCAAGAAGCT TGTGCACCGC GACCTGGCCG CCCGCAACAT CCTGGTCTCA GAGGACCTGG TGGCCAAGGT CAGCGACTTT GGCCTGGCCA AAGCCGAGCG GAAGGGGCTA GACTCAAGCC GGCTGCCCGT CAAGTGGACG GCGCCCGAGG CTCTCAAACA CGGGAAGTTC ACCAGCAAGT CGGATGTCTG GAGTTTTGGG GTGCTGCTCT GGGAGGTCTT CTCATATGGA CGGGCTCCGT ACCCTAAAAT GTCACTGAAA GAGGTGTCGG AGGCCGTGGA GAAGGGGTAC CGCATGGAAC CCCCCGAGGG CTGTCCAGGC CCCGTGCACG TCCTCATGAG CAGCTGCTGG GAGGCAGAGC CCGCCCGCCG GCCACCCTTC CGCAAACTGG CCGAGAAGCT GGCCCGGGAG CTACGCAGTG CAGGTGCCCC AGCCTCCGTC TCAGGGCAGG ACGCCGACGG CTCCACCTCG CCCCGAAGCC AGGAGCCCTG A
The stop codons will be deleted if pcDNA3.1+ /C-(K)DYK vector is selected.
RefSeq
NP_647611.1
CDS 301..1701
Misc Feature(1) 127..129
Misc Feature(2) 325..501
Misc Feature(3) 337..492
Misc Feature(4) order(346..348,352..354,361..363,373..375,430..435,478..480,484..489)
Misc Feature(5) 529..822
Misc Feature(6) 541..813
Misc Feature(7) order(562..564,616..618,679..681,685..687)
Misc Feature(8) order(682..684,763..765)
Misc Feature(9) 859..1620
Misc Feature(10) 880..1611
Misc Feature(11) 880..1611
Misc Feature(12) order(898..906,922..924,955..957,961..963,1042..1044,1087..1098,1105..1110,1231..1233,1243..1248,1252..1254,1282..1287,1324..1338,1363..1365,1465..1467)
Misc Feature(13) order(898..906,922..924,955..957,961..963,1042..1044,1087..1098,1105..1110,1243..1248,1252..1254,1282..1287)
Misc Feature(14) order(940..942,973..975,1009..1011,1018..1023,1027..1029,1066..1068)
Misc Feature(15) order(1231..1233,1243..1245,1324..1338,1363..1365,1465..1467)
Misc Feature(16) 1282..1344
Exon (1) 1..249
Exon (2) 250..309
Exon (3) 310..423
Exon (4) 424..539
Exon (5) 540..759
Exon (6) 760..853
Exon (7) 854..919
Exon (8) 920..1019
Exon (9) 1020..1104
Exon (10) 1105..1178
Exon (11) 1179..1374
Exon (12) 1375..1461
Exon (13) 1462..1915
Translation
Target ORF information:
RefSeq Version NM_139354.2
Organism Homo sapiens(human)
Definition Homo sapiens megakaryocyte-associated tyrosine kinase (MATK), transcript variant 3, mRNA.
Target ORF information:
Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+ /C-(K)DYK
NM_139354.2
ORF Insert Sequence:
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021 1081 1141 1201 1261 1321 1381 ATGCCAACGA GGCGCTGGGC CCCGGGCACC CAGTGTATCA CCAAATGCGA GCACACCCGC CCCAAGCCAG GGGAGCTGGC CTTCCGCAAG GGCGACGTGG TCACCATCCT GGAGGCCTGC GAGAACAAGA GCTGGTACCG CGTCAAGCAC CACACCAGTG GACAGGAGGG GCTGCTGGCA GCTGGGGCGC TGCGGGAGCG GGAGGCCCTC TCCGCAGACC CCAAGCTCAG CCTCATGCCG TGGTTCCACG GGAAGATCTC GGGCCAGGAG GCTGTCCAGC AGCTGCAGCC TCCCGAGGAT GGGCTGTTCC TGGTGCGGGA GTCCGCGCGC CACCCCGGCG ACTACGTCCT GTGCGTGAGC TTTGGCCGCG ACGTCATCCA CTACCGCGTG CTGCACCGCG ACGGCCACCT CACAATCGAT GAGGCCGTGT TCTTCTGCAA CCTCATGGAC ATGGTGGAGC ATTACAGCAA GGACAAGGGC GCTATCTGCA CCAAGCTGGT GAGACCAAAG CGGAAACACG GGACCAAGTC GGCCGAGGAG GAGCTGGCCA GGGCGGGCTG GTTACTGAAC CTGCAGCATT TGACATTGGG AGCACAGATC GGAGAGGGAG AGTTTGGAGC TGTCCTGCAG GGTGAGTACC TGGGGCAAAA GGTGGCCGTG AAGAATATCA AGTGTGATGT GACAGCCCAG GCCTTCCTGG ACGAGACGGC CGTCATGACG AAGATGCAAC ACGAGAACCT GGTGCGTCTC CTGGGCGTGA TCCTGCACCA GGGGCTGTAC ATTGTCATGG AGCACGTGAG CAAGGGCAAC CTGGTGAACT TTCTGCGGAC CCGGGGTCGA GCCCTCGTGA ACACCGCTCA GCTCCTGCAG TTTTCTCTGC ACGTGGCCGA GGGCATGGAG TACCTGGAGA GCAAGAAGCT TGTGCACCGC GACCTGGCCG CCCGCAACAT CCTGGTCTCA GAGGACCTGG TGGCCAAGGT CAGCGACTTT GGCCTGGCCA AAGCCGAGCG GAAGGGGCTA GACTCAAGCC GGCTGCCCGT CAAGTGGACG GCGCCCGAGG CTCTCAAACA CGGGAAGTTC ACCAGCAAGT CGGATGTCTG GAGTTTTGGG GTGCTGCTCT GGGAGGTCTT CTCATATGGA CGGGCTCCGT ACCCTAAAAT GTCACTGAAA GAGGTGTCGG AGGCCGTGGA GAAGGGGTAC CGCATGGAAC CCCCCGAGGG CTGTCCAGGC CCCGTGCACG TCCTCATGAG CAGCTGCTGG GAGGCAGAGC CCGCCCGCCG GCCACCCTTC CGCAAACTGG CCGAGAAGCT GGCCCGGGAG CTACGCAGTG CAGGTGCCCC AGCCTCCGTC TCAGGGCAGG ACGCCGACGG CTCCACCTCG CCCCGAAGCC AGGAGCCCTG A
The stop codons will be deleted if pcDNA3.1+ /C-(K)DYK vector is selected.
CloneID
OHu06309
Clone ID Related Accession (Same CDS sequence)
XM_011528018.1
, NM_139355.2
Accession Version
XM_011528018.1 Latest version!
Documents for ORF clone product in dufault vector
Sequence Information
ORF Nucleotide Sequence (Length: 1524bp)
Protein sequence
SNP
Vector
pcDNA3.1+ /C-(K)DYK or customized vector
User Manual
Clone information
Clone Map
MSDS
Tag on pcDNA3.1+ /C-(K)DYK
C terminal DYKDDDDK tags
COA
ORF Insert Method
CloneEZ® Seamless cloning technology
Insert Structure
linear
Update Date
2016-06-06
Organism
Homo sapiens(human)
Product
megakaryocyte-associated tyrosine-protein kinase isoform X1
Comment
Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000019.10) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Status :: Full annotation
Annotation Version :: Homo sapiens Annotation Release 108
Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline
Annotation Software Version :: 7.0
Annotation Method :: Best-placed RefSeq; Gnomon
Features Annotated :: Gene; mRNA; CDS; ncRNA
##Genome-Annotation-Data-END##
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021 1081 1141 1201 1261 1321 1381 1441 1501 ATGGCGGGGC GAGGCTCTCT GGTTTCCTGG CGGGCATTTC ACGGCTGTGA TTCTGCTGAG GAACTTCCCC GGGTGAGCCC CCGCTTCCTC CGAGCCTGGC ACCCCCCTCC CGTCTCAGCC AGGATGCCAA CGAGGCGCTG GGCCCCGGGC ACCCAGTGTA TCACCAAATG CGAGCACACC CGCCCCAAGC CAGGGGAGCT GGCCTTCCGC AAGGGCGACG TGGTCACCAT CCTGGAGGCC TGCGAGAACA AGAGCTGGTA CCGCGTCAAG CACCACACCA GTGGACAGGA GGGGCTGCTG GCAGCTGGGG CGCTGCGGGA GCGGGAGGCC CTCTCCGCAG ACCCCAAGCT CAGCCTCATG CCGTGGTTCC ACGGGAAGAT CTCGGGCCAG GAGGCTGTCC AGCAGCTGCA GCCTCCCGAG GATGGGCTGT TCCTGGTGCG GGAGTCCGCG CGCCACCCCG GCGACTACGT CCTGTGCGTG AGCTTTGGCC GCGACGTCAT CCACTACCGC GTGCTGCACC GCGACGGCCA CCTCACAATC GATGAGGCCG TGTTCTTCTG CAACCTCATG GACATGGTGG AGCATTACAG CAAGGACAAG GGCGCTATCT GCACCAAGCT GGTGAGACCA AAGCGGAAAC ACGGGACCAA GTCGGCCGAG GAGGAGCTGG CCAGGGCGGG CTGGTTACTG AACCTGCAGC ATTTGACATT GGGAGCACAG ATCGGAGAGG GAGAGTTTGG AGCTGTCCTG CAGGGTGAGT ACCTGGGGCA AAAGGTGGCC GTGAAGAATA TCAAGTGTGA TGTGACAGCC CAGGCCTTCC TGGACGAGAC GGCCGTCATG ACGAAGATGC AACACGAGAA CCTGGTGCGT CTCCTGGGCG TGATCCTGCA CCAGGGGCTG TACATTGTCA TGGAGCACGT GAGCAAGGGC AACCTGGTGA ACTTTCTGCG GACCCGGGGT CGAGCCCTCG TGAACACCGC TCAGCTCCTG CAGTTTTCTC TGCACGTGGC CGAGGGCATG GAGTACCTGG AGAGCAAGAA GCTTGTGCAC CGCGACCTGG CCGCCCGCAA CATCCTGGTC TCAGAGGACC TGGTGGCCAA GGTCAGCGAC TTTGGCCTGG CCAAAGCCGA GCGGAAGGGG CTAGACTCAA GCCGGCTGCC CGTCAAGTGG ACGGCGCCCG AGGCTCTCAA ACACGGGAAG TTCACCAGCA AGTCGGATGT CTGGAGTTTT GGGGTGCTGC TCTGGGAGGT CTTCTCATAT GGACGGGCTC CGTACCCTAA AATGTCACTG AAAGAGGTGT CGGAGGCCGT GGAGAAGGGG TACCGCATGG AACCCCCCGA GGGCTGTCCA GGCCCCGTGC ACGTCCTCAT GAGCAGCTGC TGGGAGGCAG AGCCCGCCCG CCGGCCACCC TTCCGCAAAC TGGCCGAGAA GCTGGCCCGG GAGCTACGCA GTGCAGGTGC CCCAGCCTCC GTCTCAGGGC AGGACGCCGA CGGCTCCACC TCGCCCCGAA GCCAGGAGCC CTGA
The stop codons will be deleted if pcDNA3.1+ /C-(K)DYK vector is selected.
RefSeq
XP_011526320.1
CDS 556..2079
Misc Feature(1) 703..879
Misc Feature(2) order(724..726,730..732,739..741,751..753,808..813,856..858,862..867)
Misc Feature(3) 907..1200
Misc Feature(4) order(940..942,994..996,1057..1059,1063..1065)
Misc Feature(5) order(1060..1062,1141..1143)
Misc Feature(6) 1237..1998
Misc Feature(7) 1258..1989
Misc Feature(8) order(1276..1284,1300..1302,1333..1335,1339..1341,1420..1422,1465..1476,1483..1488,1609..1611,1621..1626,1630..1632,1660..1665,1702..1716,1741..1743,1843..1845)
Misc Feature(9) order(1276..1284,1300..1302,1333..1335,1339..1341,1420..1422,1465..1476,1483..1488,1621..1626,1630..1632,1660..1665)
Misc Feature(10) order(1318..1320,1351..1353,1387..1389,1396..1401,1405..1407,1444..1446)
Misc Feature(11) order(1609..1611,1621..1623,1702..1716,1741..1743,1843..1845)
Misc Feature(12) 1660..1722
Translation
Target ORF information:
RefSeq Version XM_011528018.1
Organism Homo sapiens(human)
Definition Homo sapiens megakaryocyte-associated tyrosine kinase (MATK), transcript variant X1, mRNA.
Target ORF information:
Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+ /C-(K)DYK
XM_011528018.1
ORF Insert Sequence:
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021 1081 1141 1201 1261 1321 1381 1441 1501 ATGGCGGGGC GAGGCTCTCT GGTTTCCTGG CGGGCATTTC ACGGCTGTGA TTCTGCTGAG GAACTTCCCC GGGTGAGCCC CCGCTTCCTC CGAGCCTGGC ACCCCCCTCC CGTCTCAGCC AGGATGCCAA CGAGGCGCTG GGCCCCGGGC ACCCAGTGTA TCACCAAATG CGAGCACACC CGCCCCAAGC CAGGGGAGCT GGCCTTCCGC AAGGGCGACG TGGTCACCAT CCTGGAGGCC TGCGAGAACA AGAGCTGGTA CCGCGTCAAG CACCACACCA GTGGACAGGA GGGGCTGCTG GCAGCTGGGG CGCTGCGGGA GCGGGAGGCC CTCTCCGCAG ACCCCAAGCT CAGCCTCATG CCGTGGTTCC ACGGGAAGAT CTCGGGCCAG GAGGCTGTCC AGCAGCTGCA GCCTCCCGAG GATGGGCTGT TCCTGGTGCG GGAGTCCGCG CGCCACCCCG GCGACTACGT CCTGTGCGTG AGCTTTGGCC GCGACGTCAT CCACTACCGC GTGCTGCACC GCGACGGCCA CCTCACAATC GATGAGGCCG TGTTCTTCTG CAACCTCATG GACATGGTGG AGCATTACAG CAAGGACAAG GGCGCTATCT GCACCAAGCT GGTGAGACCA AAGCGGAAAC ACGGGACCAA GTCGGCCGAG GAGGAGCTGG CCAGGGCGGG CTGGTTACTG AACCTGCAGC ATTTGACATT GGGAGCACAG ATCGGAGAGG GAGAGTTTGG AGCTGTCCTG CAGGGTGAGT ACCTGGGGCA AAAGGTGGCC GTGAAGAATA TCAAGTGTGA TGTGACAGCC CAGGCCTTCC TGGACGAGAC GGCCGTCATG ACGAAGATGC AACACGAGAA CCTGGTGCGT CTCCTGGGCG TGATCCTGCA CCAGGGGCTG TACATTGTCA TGGAGCACGT GAGCAAGGGC AACCTGGTGA ACTTTCTGCG GACCCGGGGT CGAGCCCTCG TGAACACCGC TCAGCTCCTG CAGTTTTCTC TGCACGTGGC CGAGGGCATG GAGTACCTGG AGAGCAAGAA GCTTGTGCAC CGCGACCTGG CCGCCCGCAA CATCCTGGTC TCAGAGGACC TGGTGGCCAA GGTCAGCGAC TTTGGCCTGG CCAAAGCCGA GCGGAAGGGG CTAGACTCAA GCCGGCTGCC CGTCAAGTGG ACGGCGCCCG AGGCTCTCAA ACACGGGAAG TTCACCAGCA AGTCGGATGT CTGGAGTTTT GGGGTGCTGC TCTGGGAGGT CTTCTCATAT GGACGGGCTC CGTACCCTAA AATGTCACTG AAAGAGGTGT CGGAGGCCGT GGAGAAGGGG TACCGCATGG AACCCCCCGA GGGCTGTCCA GGCCCCGTGC ACGTCCTCAT GAGCAGCTGC TGGGAGGCAG AGCCCGCCCG CCGGCCACCC TTCCGCAAAC TGGCCGAGAA GCTGGCCCGG GAGCTACGCA GTGCAGGTGC CCCAGCCTCC GTCTCAGGGC AGGACGCCGA CGGCTCCACC TCGCCCCGAA GCCAGGAGCC CTGA
The stop codons will be deleted if pcDNA3.1+ /C-(K)DYK vector is selected.
CloneID
OHu03046
Clone ID Related Accession (Same CDS sequence)
NM_002378.3
Accession Version
NM_002378.3 Latest version!
Documents for ORF clone product in dufault vector
Sequence Information
ORF Nucleotide Sequence (Length: 1527bp)
Protein sequence
SNP
Vector
pcDNA3.1+ /C-(K)DYK or customized vector
User Manual
Clone information
Clone Map
MSDS
Tag on pcDNA3.1+ /C-(K)DYK
C terminal DYKDDDDK tags
ORF Insert Method
CloneEZ® Seamless cloning technology
Insert Structure
linear
Update Date
2017-10-02
Organism
Homo sapiens(human)
Product
megakaryocyte-associated tyrosine-protein kinase isoform b
Comment
Comment: REVIEWED REFSEQ: This record has been curated by NCBI staff. The reference sequence was derived from AK055395.1, DA592994.1, BC000114.1 and X77278.1. On Aug 4, 2006 this sequence version replaced NM_002378.2.
Transcript Variant: This variant (2) contains an alternate region at the 5' end of the coding region and lacks two exons in the coding region, as compared to variant 1. The encoded isoform b has a slightly longer and unique N-terminus compared to isoform a.
Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications.
##Evidence-Data-START##
Transcript exon combination :: AK055395.1, SRR1660805.125799.1 [ECO:0000332]
RNAseq introns :: mixed/partial sample support SAMEA1965299, SAMEA1966682 [ECO:0000350]
##Evidence-Data-END##
COMPLETENESS: complete on the 3' end.
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021 1081 1141 1201 1261 1321 1381 1441 1501 ATGCAGGGAC ATTTCCCTGC TGAACGAAGA GAAGGCAGAC CTCGGCGAGG GACCCGTGGT CAGCAGCAGC TTCTGGTGAG CCCCCGCTTC CTCCGAGCCT GGCACCCCCC TCCCGTCTCA GCCAGGATGC CAACGAGGCG CTGGGCCCCG GGCACCCAGT GTATCACCAA ATGCGAGCAC ACCCGCCCCA AGCCAGGGGA GCTGGCCTTC CGCAAGGGCG ACGTGGTCAC CATCCTGGAG GCCTGCGAGA ACAAGAGCTG GTACCGCGTC AAGCACCACA CCAGTGGACA GGAGGGGCTG CTGGCAGCTG GGGCGCTGCG GGAGCGGGAG GCCCTCTCCG CAGACCCCAA GCTCAGCCTC ATGCCGTGGT TCCACGGGAA GATCTCGGGC CAGGAGGCTG TCCAGCAGCT GCAGCCTCCC GAGGATGGGC TGTTCCTGGT GCGGGAGTCC GCGCGCCACC CCGGCGACTA CGTCCTGTGC GTGAGCTTTG GCCGCGACGT CATCCACTAC CGCGTGCTGC ACCGCGACGG CCACCTCACA ATCGATGAGG CCGTGTTCTT CTGCAACCTC ATGGACATGG TGGAGCATTA CAGCAAGGAC AAGGGCGCTA TCTGCACCAA GCTGGTGAGA CCAAAGCGGA AACACGGGAC CAAGTCGGCC GAGGAGGAGC TGGCCAGGGC GGGCTGGTTA CTGAACCTGC AGCATTTGAC ATTGGGAGCA CAGATCGGAG AGGGAGAGTT TGGAGCTGTC CTGCAGGGTG AGTACCTGGG GCAAAAGGTG GCCGTGAAGA ATATCAAGTG TGATGTGACA GCCCAGGCCT TCCTGGACGA GACGGCCGTC ATGACGAAGA TGCAACACGA GAACCTGGTG CGTCTCCTGG GCGTGATCCT GCACCAGGGG CTGTACATTG TCATGGAGCA CGTGAGCAAG GGCAACCTGG TGAACTTTCT GCGGACCCGG GGTCGAGCCC TCGTGAACAC CGCTCAGCTC CTGCAGTTTT CTCTGCACGT GGCCGAGGGC ATGGAGTACC TGGAGAGCAA GAAGCTTGTG CACCGCGACC TGGCCGCCCG CAACATCCTG GTCTCAGAGG ACCTGGTGGC CAAGGTCAGC GACTTTGGCC TGGCCAAAGC CGAGCGGAAG GGGCTAGACT CAAGCCGGCT GCCCGTCAAG TGGACGGCGC CCGAGGCTCT CAAACACGGG AAGTTCACCA GCAAGTCGGA TGTCTGGAGT TTTGGGGTGC TGCTCTGGGA GGTCTTCTCA TATGGACGGG CTCCGTACCC TAAAATGTCA CTGAAAGAGG TGTCGGAGGC CGTGGAGAAG GGGTACCGCA TGGAACCCCC CGAGGGCTGT CCAGGCCCCG TGCACGTCCT CATGAGCAGC TGCTGGGAGG CAGAGCCCGC CCGCCGGCCA CCCTTCCGCA AACTGGCCGA GAAGCTGGCC CGGGAGCTAC GCAGTGCAGG TGCCCCAGCC TCCGTCTCAG GGCAGGACGC CGACGGCTCC ACCTCGCCCC GAAGCCAGGA GCCCTGA
The stop codons will be deleted if pcDNA3.1+ /C-(K)DYK vector is selected.
RefSeq
NP_002369.2
CDS 339..1865
Misc Feature(1) 1..413
Misc Feature(2) 315..317
Misc Feature(3) 489..665
Misc Feature(4) 501..656
Misc Feature(5) order(510..512,516..518,525..527,537..539,594..599,642..644,648..653)
Misc Feature(6) 693..986
Misc Feature(7) 705..977
Misc Feature(8) order(726..728,780..782,843..845,849..851)
Misc Feature(9) order(846..848,927..929)
Misc Feature(10) 1023..1784
Misc Feature(11) 1044..1775
Misc Feature(12) 1044..1775
Misc Feature(13) order(1062..1070,1086..1088,1119..1121,1125..1127,1206..1208,1251..1262,1269..1274,1395..1397,1407..1412,1416..1418,1446..1451,1488..1502,1527..1529,1629..1631)
Misc Feature(14) order(1062..1070,1086..1088,1119..1121,1125..1127,1206..1208,1251..1262,1269..1274,1407..1412,1416..1418,1446..1451)
Misc Feature(15) order(1104..1106,1137..1139,1173..1175,1182..1187,1191..1193,1230..1232)
Misc Feature(16) order(1395..1397,1407..1409,1488..1502,1527..1529,1629..1631)
Misc Feature(17) 1446..1508
Exon (1) 1..281
Exon (2) 282..413
Exon (3) 414..473
Exon (4) 474..587
Exon (5) 588..703
Exon (6) 704..923
Exon (7) 924..1017
Exon (8) 1018..1083
Exon (9) 1084..1183
Exon (10) 1184..1268
Exon (11) 1269..1342
Exon (12) 1343..1538
Exon (13) 1539..1625
Exon (14) 1626..2079
Translation
Target ORF information:
RefSeq Version NM_002378.3
Organism Homo sapiens(human)
Definition Homo sapiens megakaryocyte-associated tyrosine kinase (MATK), transcript variant 2, mRNA.
Target ORF information:
Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+ /C-(K)DYK
NM_002378.3
ORF Insert Sequence:
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021 1081 1141 1201 1261 1321 1381 1441 1501 ATGCAGGGAC ATTTCCCTGC TGAACGAAGA GAAGGCAGAC CTCGGCGAGG GACCCGTGGT CAGCAGCAGC TTCTGGTGAG CCCCCGCTTC CTCCGAGCCT GGCACCCCCC TCCCGTCTCA GCCAGGATGC CAACGAGGCG CTGGGCCCCG GGCACCCAGT GTATCACCAA ATGCGAGCAC ACCCGCCCCA AGCCAGGGGA GCTGGCCTTC CGCAAGGGCG ACGTGGTCAC CATCCTGGAG GCCTGCGAGA ACAAGAGCTG GTACCGCGTC AAGCACCACA CCAGTGGACA GGAGGGGCTG CTGGCAGCTG GGGCGCTGCG GGAGCGGGAG GCCCTCTCCG CAGACCCCAA GCTCAGCCTC ATGCCGTGGT TCCACGGGAA GATCTCGGGC CAGGAGGCTG TCCAGCAGCT GCAGCCTCCC GAGGATGGGC TGTTCCTGGT GCGGGAGTCC GCGCGCCACC CCGGCGACTA CGTCCTGTGC GTGAGCTTTG GCCGCGACGT CATCCACTAC CGCGTGCTGC ACCGCGACGG CCACCTCACA ATCGATGAGG CCGTGTTCTT CTGCAACCTC ATGGACATGG TGGAGCATTA CAGCAAGGAC AAGGGCGCTA TCTGCACCAA GCTGGTGAGA CCAAAGCGGA AACACGGGAC CAAGTCGGCC GAGGAGGAGC TGGCCAGGGC GGGCTGGTTA CTGAACCTGC AGCATTTGAC ATTGGGAGCA CAGATCGGAG AGGGAGAGTT TGGAGCTGTC CTGCAGGGTG AGTACCTGGG GCAAAAGGTG GCCGTGAAGA ATATCAAGTG TGATGTGACA GCCCAGGCCT TCCTGGACGA GACGGCCGTC ATGACGAAGA TGCAACACGA GAACCTGGTG CGTCTCCTGG GCGTGATCCT GCACCAGGGG CTGTACATTG TCATGGAGCA CGTGAGCAAG GGCAACCTGG TGAACTTTCT GCGGACCCGG GGTCGAGCCC TCGTGAACAC CGCTCAGCTC CTGCAGTTTT CTCTGCACGT GGCCGAGGGC ATGGAGTACC TGGAGAGCAA GAAGCTTGTG CACCGCGACC TGGCCGCCCG CAACATCCTG GTCTCAGAGG ACCTGGTGGC CAAGGTCAGC GACTTTGGCC TGGCCAAAGC CGAGCGGAAG GGGCTAGACT CAAGCCGGCT GCCCGTCAAG TGGACGGCGC CCGAGGCTCT CAAACACGGG AAGTTCACCA GCAAGTCGGA TGTCTGGAGT TTTGGGGTGC TGCTCTGGGA GGTCTTCTCA TATGGACGGG CTCCGTACCC TAAAATGTCA CTGAAAGAGG TGTCGGAGGC CGTGGAGAAG GGGTACCGCA TGGAACCCCC CGAGGGCTGT CCAGGCCCCG TGCACGTCCT CATGAGCAGC TGCTGGGAGG CAGAGCCCGC CCGCCGGCCA CCCTTCCGCA AACTGGCCGA GAAGCTGGCC CGGGAGCTAC GCAGTGCAGG TGCCCCAGCC TCCGTCTCAG GGCAGGACGC CGACGGCTCC ACCTCGCCCC GAAGCCAGGA GCCCTGA
The stop codons will be deleted if pcDNA3.1+ /C-(K)DYK vector is selected.
Differential protein-protein interactions of LRRK1 and LRRK2 indicate roles in distinct cellular signaling pathways.
Journal of neurochemistry131(2)239-50(2014 Oct)
Reyniers L,Del Giudice MG,Civiero L,Belluzzi E,Lobbestael E,Beilina A,Arrigoni G,Derua R,Waelkens E,Li Y,Crosio C,Iaccarino C,Cookson MR,Baekelandt V,Greggio E,Taymans JM
Unbiased screen for interactors of leucine-rich repeat kinase 2 supports a common pathway for sporadic and familial Parkinson disease.
Proceedings of the National Academy of Sciences of the United States of America111(7)2626-31(2014 Feb)
Beilina A,Rudenko IN,Kaganovich A,Civiero L,Chau H,Kalia SK,Kalia LV,Lobbestael E,Chia R,Ndukwe K,Ding J,Nalls MA,,,Olszewski M,Hauser DN,Kumaran R,Lozano AM,Baekelandt V,Greene LE,Taymans JM,Greggio E,Cookson MR