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rps13 cDNA ORF clone, Danio rerio(zebrafish)

Summary

Gene Symbol rps13
Entrez Gene ID 415169
Full Name ribosomal protein S13
Synonyms fb14f11,fd13f08,fd60g01,wu:fb14f11,wu:fd13f08,wu:fd60g01,zgc:91809
General protein information
Preferred Names

ribosomal protein S13

Names

40S ribosomal protein S13
Gene Type protein-coding
Organism Danio rerio(zebrafish)

Reference Sequences (RefSeq)

mRNA and Protein(s)

mRNA Protein Name
NM_001002079.1 NP_001002079.1 40S ribosomal protein S13

Pathways from BioSystems


Homologies


Gallus gallus (chicken) RPS13 NP_001001783.1
Anopheles gambiae (African malaria mosquito) RS13_ANOGA XP_315982.2
Kluyveromyces lactis KLLA0F18040g XP_455889.2
Neurospora crassa NCU03038 XP_964043.1
Arabidopsis thaliana (thale cress) AT3G60770 NP_567104.1
Oryza sativa (rice) Os08g0117300 NP_001060861.1
RPS13 XP_001086088.1
Canis lupus familiaris (dog) RPS13 XP_864902.1
Bos taurus (cattle) RPS13 NP_001020513.1
Caenorhabditis elegans (roundworm) rps-13 NP_498393.1
Eremothecium gossypii AGOS_AGL030W NP_986636.1
Oryza sativa (rice) Os08g0117200 NP_001060860.2
Xenopus tropicalis (tropical clawed frog) rps13 NP_001016602.1
Mus musculus (house mouse) Rps13 NP_080809.1
Danio rerio (zebrafish) rps13 NP_001002079.1
Schizosaccharomyces pombe (fission yeast) rps13 NP_593900.1
Homo sapiens (human) RPS13 NP_001008.1
Pan troglodytes (chimpanzee) RPS13 XP_003312983.1
Drosophila melanogaster (fruit fly) RpS13 NP_476938.1
Magnaporthe oryzae (rice blast fungus) MGG_00349 XP_003718734.1
Saccharomyces cerevisiae (baker's yeast) RPS13 NP_010349.3
Arabidopsis thaliana (thale cress) RPS13A NP_567151.1

Gene Ontology


Bibliography

Related articles in PubMed

Evolution of complexity in the zebrafish synapse proteome.
Bay?s ?, Collins MO, Reig-Viader R, Gou G, Goulding D, Izquierdo A, Choudhary JS, Emes RD, Grant SG
Nature communications814613(2017 Mar)

Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database.
Pasquier J, Cabau C, Nguyen T, Jouanno E, Severac D, Braasch I, Journot L, Pontarotti P, Klopp C, Postlethwait JH, Guiguen Y, Bobe J
BMC genomics17368(2016 05)

Proteome mapping of adult zebrafish marrow neutrophils reveals partial cross species conservation to human peripheral neutrophils.
Singh SK, Sethi S, Aravamudhan S, Kr?ger M, Grabher C
PloS one8(9)e73998(2013)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following rps13 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the rps13 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
ODa37744 NM_001002079.1
Latest version!		 Danio rerio ribosomal protein S13 (rps13), mRNA. pcDNA3.1+/C-(K)DYK or customized vector 7-9 $104.30
$149.00

ORF Online Only Promotion

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)


CloneID ODa37744
Clone ID Related Accession (Same CDS sequence) NM_001002079.1
Accession Version NM_001002079.1 Latest version! Documents for ORF clone product in default vector
Sequence Information ORF Nucleotide Sequence (Length: 456bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ™ Seamless cloning technology
Insert Structure linear
Update Date 2020-01-04
Organism Danio rerio(zebrafish)
Product 40S ribosomal protein S13
Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC072552.1. ##Evidence-Data-START## Transcript exon combination :: BC072552.1, CF347218.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA2168446, SAMEA2168447 [ECO:0000348] ##Evidence-Data-END## 

1
61
121
181
241
301
361
421
ATGGGTCGTA TGCATGCTCC TGGCAAGGGC TTGTCCCAGT CGGCACTGCC CTATAGGCGA 
AGTGTCCCCA CATGGCTCAA ATTGACATCT GATGATGTTA AAGAGCAAAT CTTTAAACTG 
GCCAAGAAGG GTCTGACCCC CTCTCAGATC GGTGTGATCC TGAGGGATTC CCATGGTGTT 
GCTCAGGTGC GTTTCGTCAC TGGCAACAAA ATCCTTAGGA TCCTAAAGTC CAAAGGCCTG 
GCCCCCGACC TGCCTGAGGA TCTCTACCAC CTCATCAAGA AGGCTGTCGC TGTGAGGAAG 
CACTTGGAGA GGAACAGAAA GGACAAGGAT GCCAAGTTCC GCCTGATTCT GGTTGAGAGC 
AGAATCCACA GGCTTGCCCG CTACTACAAG ACCAGGAGAG TACTTGCCCC CAACTGGAAG 
TACGAATCCT CCACAGCTTC TGCATTGGTG GCATAA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq NP_001002079.1
CDS11..466
Translation

Target ORF information:

RefSeq Version NM_001002079.1
Organism Danio rerio(zebrafish)
Definition Danio rerio ribosomal protein S13 (rps13), mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
 NM_001002079.1

ORF Insert Sequence:

1
61
121
181
241
301
361
421
ATGGGTCGTA TGCATGCTCC TGGCAAGGGC TTGTCCCAGT CGGCACTGCC CTATAGGCGA 
AGTGTCCCCA CATGGCTCAA ATTGACATCT GATGATGTTA AAGAGCAAAT CTTTAAACTG 
GCCAAGAAGG GTCTGACCCC CTCTCAGATC GGTGTGATCC TGAGGGATTC CCATGGTGTT 
GCTCAGGTGC GTTTCGTCAC TGGCAACAAA ATCCTTAGGA TCCTAAAGTC CAAAGGCCTG 
GCCCCCGACC TGCCTGAGGA TCTCTACCAC CTCATCAAGA AGGCTGTCGC TGTGAGGAAG 
CACTTGGAGA GGAACAGAAA GGACAAGGAT GCCAAGTTCC GCCTGATTCT GGTTGAGAGC 
AGAATCCACA GGCTTGCCCG CTACTACAAG ACCAGGAGAG TACTTGCCCC CAACTGGAAG 
TACGAATCCT CCACAGCTTC TGCATTGGTG GCATAA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

PubMed

book

Evolution of complexity in the zebrafish synapse proteome.
Nature communications814613(2017 Mar)
Bay?s ?,Collins MO,Reig-Viader R,Gou G,Goulding D,Izquierdo A,Choudhary JS,Emes RD,Grant SG


book

Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database.
BMC genomics17368(2016 05)
Pasquier J,Cabau C,Nguyen T,Jouanno E,Severac D,Braasch I,Journot L,Pontarotti P,Klopp C,Postlethwait JH,Guiguen Y,Bobe J


book

Proteome mapping of adult zebrafish marrow neutrophils reveals partial cross species conservation to human peripheral neutrophils.
PloS one8(9)e73998(2013)
Singh SK,Sethi S,Aravamudhan S,Kr?ger M,Grabher C