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taf6 cDNA ORF clone, Danio rerio(zebrafish)

Summary

Gene Symbol taf6
Entrez Gene ID 447818
Full Name TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor
Synonyms wu:fb83e08,wu:fj30b02,zgc:92160
General protein information
Preferred Names

TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor

Names

transcription initiation factor TFIID subunit 6
Gene Type protein-coding
Organism Danio rerio(zebrafish)

Reference Sequences (RefSeq)

mRNA and Protein(s)

mRNA Protein Name
XM_021476094.1 XP_021331769.1 transcription initiation factor TFIID subunit 6 isoform X1
XM_009301821.2 XP_009300096.1 transcription initiation factor TFIID subunit 6 isoform X1
NM_001004557.1 NP_001004557.1 transcription initiation factor TFIID subunit 6

Pathways from BioSystems


Homologies


Canis lupus familiaris (dog) TAF6 XP_546964.2
Rattus norvegicus (Norway rat) Taf6 NP_001037690.1
Danio rerio (zebrafish) taf6 NP_001004557.1
Drosophila melanogaster (fruit fly) Taf6 NP_001262056.1
Caenorhabditis elegans (roundworm) taf-6.1 NP_493919.1
Kluyveromyces lactis KLLA0F10659g XP_455565.1
Homo sapiens (human) TAF6 NP_001177344.1
Saccharomyces cerevisiae (baker's yeast) TAF6 NP_011403.1
Schizosaccharomyces pombe (fission yeast) taf6 NP_587928.1
Xenopus tropicalis (tropical clawed frog) taf6 XP_004919136.1
Anopheles gambiae (African malaria mosquito) AgaP_AGAP004254 XP_313173.5
Magnaporthe oryzae (rice blast fungus) MGG_04877 XP_003712358.1
Mus musculus (house mouse) Taf6 NP_033341.1
Pan troglodytes (chimpanzee) TAF6 XP_003318659.1
Bos taurus (cattle) TAF6 NP_001015525.1
Eremothecium gossypii AGOS_AFL020W NP_985528.1
Neurospora crassa NCU07757 XP_958550.1

Gene Ontology


Bibliography

Related articles in PubMed

Quantitative mass spectrometry of TATA binding protein-containing complexes and subunit phosphorylations during the cell cycle.
Pijnappel WP, Kolkman A, Baltissen MP, Heck AJ, Timmers HM
Proteome science746(2009 Dec)

The zebrafish gene map defines ancestral vertebrate chromosomes.
Woods IG, Wilson C, Friedlander B, Chang P, Reyes DK, Nix R, Kelly PD, Chu F, Postlethwait JH, Talbot WS
Genome research15(9)1307-14(2005 Sep)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following taf6 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the taf6 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
ODa34641 NM_001004557.1
Latest version!		 Danio rerio TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor (taf6), mRNA. pcDNA3.1+/C-(K)DYK or customized vector 7-9 $342.30
$489.00
ODa34641 XM_009301821.2
Latest version!		 Danio rerio TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor (taf6), transcript variant X1, mRNA. pcDNA3.1+/C-(K)DYK or customized vector 7-9 $342.30
$489.00
ODa34641 XM_021476094.1
Latest version!		 Danio rerio TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor (taf6), transcript variant X1, mRNA. pcDNA3.1+/C-(K)DYK or customized vector 7-9 $342.30
$489.00

ORF Online Only Promotion

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)


CloneID ODa34641
Clone ID Related Accession (Same CDS sequence) XM_021476094.1 , XM_009301821.2 , NM_001004557.1
Accession Version NM_001004557.1 Latest version! Documents for ORF clone product in default vector
Sequence Information ORF Nucleotide Sequence (Length: 1911bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ™ Seamless cloning technology
Insert Structure linear
Update Date 2019-07-28
Organism Danio rerio(zebrafish)
Product transcription initiation factor TFIID subunit 6
Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC081612.1. ##Evidence-Data-START## CDS exon combination :: BC081612.1 [ECO:0000331] RNAseq introns :: single sample supports all introns SAMEA2168446, SAMEA2168447 [ECO:0000348] ##Evidence-Data-END## 

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
1441
1501
1561
1621
1681
1741
1801
1861
ATGGCAGAGG AACGCAGACA GAAGCTGTGT TCTGTGATCC TGCCCACTGA TTCCATGAAG 
GCAATGGCTG AGTCGGTGGG TATAGGCTCA CTGCAGGAAG ACAGCTGTCT GACCCTCAGT 
GAAGAAGTTA GCTACAGGAT CAAAGAGATT GCACAGGATG CATTGAAGTT TATGCACCAT 
GGGAAAAGAT GCAAACTTAC AACTGGTGAC ATTGATCATG CCCTTAAACT GAAAAATGTG 
GAGCCACTGT ATGGATTCCA GTCCGAGGAG TTCATCCCAT TTCGCTTTGC AAGTGGAGGT 
GGCAGAGAAT TGCACTTTTA TGAAGAAAAA GAAGTGGATC TTAGTGACAT CATTAATACA 
CCCTTGCCTC GTGTACCTTT AGACGTTTCA CTAAAAGCTC ACTGGCTAAG TATAGATGGT 
GTCCAGCCTG CAATTCCAGA GAACCCACCT TCTGCTTCTA AAGAGCAGCA GAAGGCAGAG 
TCTACTGAGC CGCTTAAAGC TGTCAAACCT GGACAGGAAG ACGAAGGCTT TATTCAAGCC 
AAGGGTCAGA GTGCAGTTTC TGCTGAAGTC AAAGGAAAGG AAAAGATGCG GATGAAACCA 
CGTAGCACAC ATGAGCTCTC TGTGGAGCAG CAGTTGTACT ATAAAGAAAT TACTGAAGCC 
TGTGTGGGAT CCTGTGAAGC CAAAAGAGCG GAGGCACTGC AGAGCATAGC CACCGACCCA 
GGGCTGTACC AAATGCTGCC AAGGTTCAGT ACCTTCATCT CGGAGGGTGT GCGTGTAAAT 
GTTGTTCAGA ATAACTTGGC TTTGCTGATA TATTTGATGA GGATGGTGAA GGCTCTAATG 
GACAATCCAA CTCTATATTT GGAGAAATAT CTCCATGAGT TGATCCCCGC GGTGGTGACA 
TGTATTGTGA GTAAGCAACT GTGTTTGAGG CCTGATGTAG ACAATCACTG GGCTCTGCGA 
GACTTTGCTG CCCGGTTAAT GGCTCAGAGC TGCAAAACAT TCAGCACCAC AACCAACAAC 
ATCCAGTCGC GTATCACCAA AACCTTTACT AAGGCATTGT TGGATGAAAA GACTCAGTGG 
ACAACTCGTT ATGGCTGCAT TGCTGGACTT GCTGAACTTG GGCATGATGT GATAAAGACT 
TTGATCATCC CCCGACTGTT TGTAGAGGGT GCCCGTATTA AAGCAGTGAT GGATGGGCCA 
GTGGTATCCA ATATTGATAA GATTGGAGCT GATCATGTCC AGAGTCTATT ACTGAAACAT 
TGTGCAAGTG TGGTTGCTAA AACTAGGCCG GTCCCAGATC TGGTGGAGCA ATACAAAGCA 
GATTATGGTT ATCTGGGCAC TATGCTATGT TCACATGTGG TGAAGGCCCG TGCACAGGCT 
GCCTTTCAGG CCCAAACTGT TAACAGAACC ACACTTACTA TCACACAGCC ACGTCCGACT 
TTGACAATGT CTCAGAGTGG ATTGTCAACA TCAGGTGTTT CACGTACACC CAGCATAATT 
AAAGTACCCA GTTCACTTAC CCTCATGTCT ACTCGACCTG GAACACCCAC TCAGCCATCA 
CCCCCAGCAA CAAAGTATAT TGTTATGGCA ACAAGTGCAG GGGCTGCATC CACACAGCAG 
GTAATCACTC TCAGCTCCTC TCAGTCTGGA TCCCCTGTCA CAAGTACAGT CCCCAGCACA 
CCAACAAGTC TACAGCCACT CGTCAAACTG GAGTCTGGAA ATCCAGGTGC TGTGGGCAGC 
TCACGCCCAA TCCAGAAATA TATTGTGGTG TCTTTGCCTT CATCCTCTTC ATCAATGGAT 
AATAAGGGCT CAGGTGTCCT TTCCTCTTCT ACCTCACCTA TCAGCATGGA GTCTGCAGTC 
AAGCTGGAAT GTTCAGAATC ACCAGCCACA AGCACACAAT TGCCACATTG A

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq NP_001004557.1
CDS183..2093
Translation

Target ORF information:

RefSeq Version NM_001004557.1
Organism Danio rerio(zebrafish)
Definition Danio rerio TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor (taf6), mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
 NM_001004557.1

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
1441
1501
1561
1621
1681
1741
1801
1861
ATGGCAGAGG AACGCAGACA GAAGCTGTGT TCTGTGATCC TGCCCACTGA TTCCATGAAG 
GCAATGGCTG AGTCGGTGGG TATAGGCTCA CTGCAGGAAG ACAGCTGTCT GACCCTCAGT 
GAAGAAGTTA GCTACAGGAT CAAAGAGATT GCACAGGATG CATTGAAGTT TATGCACCAT 
GGGAAAAGAT GCAAACTTAC AACTGGTGAC ATTGATCATG CCCTTAAACT GAAAAATGTG 
GAGCCACTGT ATGGATTCCA GTCCGAGGAG TTCATCCCAT TTCGCTTTGC AAGTGGAGGT 
GGCAGAGAAT TGCACTTTTA TGAAGAAAAA GAAGTGGATC TTAGTGACAT CATTAATACA 
CCCTTGCCTC GTGTACCTTT AGACGTTTCA CTAAAAGCTC ACTGGCTAAG TATAGATGGT 
GTCCAGCCTG CAATTCCAGA GAACCCACCT TCTGCTTCTA AAGAGCAGCA GAAGGCAGAG 
TCTACTGAGC CGCTTAAAGC TGTCAAACCT GGACAGGAAG ACGAAGGCTT TATTCAAGCC 
AAGGGTCAGA GTGCAGTTTC TGCTGAAGTC AAAGGAAAGG AAAAGATGCG GATGAAACCA 
CGTAGCACAC ATGAGCTCTC TGTGGAGCAG CAGTTGTACT ATAAAGAAAT TACTGAAGCC 
TGTGTGGGAT CCTGTGAAGC CAAAAGAGCG GAGGCACTGC AGAGCATAGC CACCGACCCA 
GGGCTGTACC AAATGCTGCC AAGGTTCAGT ACCTTCATCT CGGAGGGTGT GCGTGTAAAT 
GTTGTTCAGA ATAACTTGGC TTTGCTGATA TATTTGATGA GGATGGTGAA GGCTCTAATG 
GACAATCCAA CTCTATATTT GGAGAAATAT CTCCATGAGT TGATCCCCGC GGTGGTGACA 
TGTATTGTGA GTAAGCAACT GTGTTTGAGG CCTGATGTAG ACAATCACTG GGCTCTGCGA 
GACTTTGCTG CCCGGTTAAT GGCTCAGAGC TGCAAAACAT TCAGCACCAC AACCAACAAC 
ATCCAGTCGC GTATCACCAA AACCTTTACT AAGGCATTGT TGGATGAAAA GACTCAGTGG 
ACAACTCGTT ATGGCTGCAT TGCTGGACTT GCTGAACTTG GGCATGATGT GATAAAGACT 
TTGATCATCC CCCGACTGTT TGTAGAGGGT GCCCGTATTA AAGCAGTGAT GGATGGGCCA 
GTGGTATCCA ATATTGATAA GATTGGAGCT GATCATGTCC AGAGTCTATT ACTGAAACAT 
TGTGCAAGTG TGGTTGCTAA AACTAGGCCG GTCCCAGATC TGGTGGAGCA ATACAAAGCA 
GATTATGGTT ATCTGGGCAC TATGCTATGT TCACATGTGG TGAAGGCCCG TGCACAGGCT 
GCCTTTCAGG CCCAAACTGT TAACAGAACC ACACTTACTA TCACACAGCC ACGTCCGACT 
TTGACAATGT CTCAGAGTGG ATTGTCAACA TCAGGTGTTT CACGTACACC CAGCATAATT 
AAAGTACCCA GTTCACTTAC CCTCATGTCT ACTCGACCTG GAACACCCAC TCAGCCATCA 
CCCCCAGCAA CAAAGTATAT TGTTATGGCA ACAAGTGCAG GGGCTGCATC CACACAGCAG 
GTAATCACTC TCAGCTCCTC TCAGTCTGGA TCCCCTGTCA CAAGTACAGT CCCCAGCACA 
CCAACAAGTC TACAGCCACT CGTCAAACTG GAGTCTGGAA ATCCAGGTGC TGTGGGCAGC 
TCACGCCCAA TCCAGAAATA TATTGTGGTG TCTTTGCCTT CATCCTCTTC ATCAATGGAT 
AATAAGGGCT CAGGTGTCCT TTCCTCTTCT ACCTCACCTA TCAGCATGGA GTCTGCAGTC 
AAGCTGGAAT GTTCAGAATC ACCAGCCACA AGCACACAAT TGCCACATTG A

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

CloneID ODa34641
Clone ID Related Accession (Same CDS sequence) XM_021476094.1 , XM_009301821.2 , NM_001004557.1
Accession Version XM_021476094.1 Latest version! Documents for ORF clone product in default vector
Sequence Information ORF Nucleotide Sequence (Length: 1911bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ™ Seamless cloning technology
Insert Structure linear
Update Date 2017-06-14
Organism Danio rerio(zebrafish)
Product transcription initiation factor TFIID subunit 6 isoform X1
Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007116.7) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
1441
1501
1561
1621
1681
1741
1801
1861
ATGGCAGAGG AACGCAGACA GAAGCTGTGT TCTGTGATCC TGCCCACTGA TTCCATGAAG 
GCAATGGCTG AGTCGGTGGG TATAGGCTCA CTGCAGGAAG ACAGCTGTCT GACCCTCAGT 
GAAGAAGTTA GCTACAGGAT CAAAGAGATT GCACAGGATG CATTGAAGTT TATGCACCAT 
GGGAAAAGAT GCAAACTTAC AACTGGTGAC ATTGATCATG CCCTTAAACT GAAAAATGTG 
GAGCCACTGT ATGGATTCCA GTCCGAGGAG TTCATCCCAT TTCGCTTTGC AAGTGGAGGT 
GGCAGAGAAT TGCACTTTTA TGAAGAAAAA GAAGTGGATC TTAGTGACAT CATTAATACA 
CCCTTGCCTC GTGTACCTTT AGACGTTTCA CTAAAAGCTC ACTGGCTAAG TATAGATGGT 
GTCCAGCCTG CAATTCCAGA GAACCCACCT TCTGCTTCTA AAGAGCAGCA GAAGGCAGAG 
TCTACTGAGC CGCTTAAAGC TGTCAAACCT GGACAGGAAG ACGAAGGCTT TATTCAAGCC 
AAGGGTCAGA GTGCAGTTTC TGCTGAAGTC AAAGGAAAGG AAAAGATGCG GATGAAACCA 
CGTAGCACAC ATGAGCTCTC TGTGGAGCAG CAGTTGTACT ATAAAGAAAT TACTGAAGCC 
TGTGTGGGAT CCTGTGAAGC CAAAAGAGCG GAGGCACTGC AGAGCATAGC CACCGACCCA 
GGGCTGTACC AAATGCTGCC AAGGTTCAGT ACCTTCATCT CGGAGGGTGT GCGTGTAAAT 
GTTGTTCAGA ATAACTTGGC TTTGCTGATA TATTTGATGA GGATGGTGAA GGCTCTAATG 
GACAATCCAA CTCTATATTT GGAGAAATAT CTCCATGAGT TGATCCCCGC GGTGGTGACA 
TGTATTGTGA GTAAGCAACT GTGTTTGAGG CCTGATGTAG ACAATCACTG GGCTCTGCGA 
GACTTTGCTG CCCGGTTAAT GGCTCAGAGC TGCAAAACAT TCAGCACCAC AACCAACAAC 
ATCCAGTCGC GTATCACCAA AACCTTTACT AAGGCATTGT TGGATGAAAA GACTCAGTGG 
ACAACTCGTT ATGGCTGCAT TGCTGGACTT GCTGAACTTG GGCATGATGT GATAAAGACT 
TTGATCATCC CCCGACTGTT TGTAGAGGGT GCCCGTATTA AAGCAGTGAT GGATGGGCCA 
GTGGTATCCA ATATTGATAA GATTGGAGCT GATCATGTCC AGAGTCTATT ACTGAAACAT 
TGTGCAAGTG TGGTTGCTAA AACTAGGCCG GTCCCAGATC TGGTGGAGCA ATACAAAGCA 
GATTATGGTT ATCTGGGCAC TATGCTATGT TCACATGTGG TGAAGGCCCG TGCACAGGCT 
GCCTTTCAGG CCCAAACTGT TAACAGAACC ACACTTACTA TCACACAGCC ACGTCCGACT 
TTGACAATGT CTCAGAGTGG ATTGTCAACA TCAGGTGTTT CACGTACACC CAGCATAATT 
AAAGTACCCA GTTCACTTAC CCTCATGTCT ACTCGACCTG GAACACCCAC TCAGCCATCA 
CCCCCAGCAA CAAAGTATAT TGTTATGGCA ACAAGTGCAG GGGCTGCATC CACACAGCAG 
GTAATCACTC TCAGCTCCTC TCAGTCTGGA TCCCCTGTCA CAAGTACAGT CCCCAGCACA 
CCAACAAGTC TACAGCCACT CGTCAAACTG GAGTCTGGAA ATCCAGGTGC TGTGGGCAGC 
TCACGCCCAA TCCAGAAATA TATTGTGGTG TCTTTGCCTT CATCCTCTTC ATCAATGGAT 
AATAAGGGCT CAGGTGTCCT TTCCTCTTCT ACCTCACCTA TCAGCATGGA GTCTGCAGTC 
AAGCTGGAAT GTTCAGAATC ACCAGCCACA AGCACACAAT TGCCACATTG A

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq XP_021331769.1
CDS315..2225
Translation

Target ORF information:

RefSeq Version XM_021476094.1
Organism Danio rerio(zebrafish)
Definition Danio rerio TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor (taf6), transcript variant X1, mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
 XM_021476094.1

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
1441
1501
1561
1621
1681
1741
1801
1861
ATGGCAGAGG AACGCAGACA GAAGCTGTGT TCTGTGATCC TGCCCACTGA TTCCATGAAG 
GCAATGGCTG AGTCGGTGGG TATAGGCTCA CTGCAGGAAG ACAGCTGTCT GACCCTCAGT 
GAAGAAGTTA GCTACAGGAT CAAAGAGATT GCACAGGATG CATTGAAGTT TATGCACCAT 
GGGAAAAGAT GCAAACTTAC AACTGGTGAC ATTGATCATG CCCTTAAACT GAAAAATGTG 
GAGCCACTGT ATGGATTCCA GTCCGAGGAG TTCATCCCAT TTCGCTTTGC AAGTGGAGGT 
GGCAGAGAAT TGCACTTTTA TGAAGAAAAA GAAGTGGATC TTAGTGACAT CATTAATACA 
CCCTTGCCTC GTGTACCTTT AGACGTTTCA CTAAAAGCTC ACTGGCTAAG TATAGATGGT 
GTCCAGCCTG CAATTCCAGA GAACCCACCT TCTGCTTCTA AAGAGCAGCA GAAGGCAGAG 
TCTACTGAGC CGCTTAAAGC TGTCAAACCT GGACAGGAAG ACGAAGGCTT TATTCAAGCC 
AAGGGTCAGA GTGCAGTTTC TGCTGAAGTC AAAGGAAAGG AAAAGATGCG GATGAAACCA 
CGTAGCACAC ATGAGCTCTC TGTGGAGCAG CAGTTGTACT ATAAAGAAAT TACTGAAGCC 
TGTGTGGGAT CCTGTGAAGC CAAAAGAGCG GAGGCACTGC AGAGCATAGC CACCGACCCA 
GGGCTGTACC AAATGCTGCC AAGGTTCAGT ACCTTCATCT CGGAGGGTGT GCGTGTAAAT 
GTTGTTCAGA ATAACTTGGC TTTGCTGATA TATTTGATGA GGATGGTGAA GGCTCTAATG 
GACAATCCAA CTCTATATTT GGAGAAATAT CTCCATGAGT TGATCCCCGC GGTGGTGACA 
TGTATTGTGA GTAAGCAACT GTGTTTGAGG CCTGATGTAG ACAATCACTG GGCTCTGCGA 
GACTTTGCTG CCCGGTTAAT GGCTCAGAGC TGCAAAACAT TCAGCACCAC AACCAACAAC 
ATCCAGTCGC GTATCACCAA AACCTTTACT AAGGCATTGT TGGATGAAAA GACTCAGTGG 
ACAACTCGTT ATGGCTGCAT TGCTGGACTT GCTGAACTTG GGCATGATGT GATAAAGACT 
TTGATCATCC CCCGACTGTT TGTAGAGGGT GCCCGTATTA AAGCAGTGAT GGATGGGCCA 
GTGGTATCCA ATATTGATAA GATTGGAGCT GATCATGTCC AGAGTCTATT ACTGAAACAT 
TGTGCAAGTG TGGTTGCTAA AACTAGGCCG GTCCCAGATC TGGTGGAGCA ATACAAAGCA 
GATTATGGTT ATCTGGGCAC TATGCTATGT TCACATGTGG TGAAGGCCCG TGCACAGGCT 
GCCTTTCAGG CCCAAACTGT TAACAGAACC ACACTTACTA TCACACAGCC ACGTCCGACT 
TTGACAATGT CTCAGAGTGG ATTGTCAACA TCAGGTGTTT CACGTACACC CAGCATAATT 
AAAGTACCCA GTTCACTTAC CCTCATGTCT ACTCGACCTG GAACACCCAC TCAGCCATCA 
CCCCCAGCAA CAAAGTATAT TGTTATGGCA ACAAGTGCAG GGGCTGCATC CACACAGCAG 
GTAATCACTC TCAGCTCCTC TCAGTCTGGA TCCCCTGTCA CAAGTACAGT CCCCAGCACA 
CCAACAAGTC TACAGCCACT CGTCAAACTG GAGTCTGGAA ATCCAGGTGC TGTGGGCAGC 
TCACGCCCAA TCCAGAAATA TATTGTGGTG TCTTTGCCTT CATCCTCTTC ATCAATGGAT 
AATAAGGGCT CAGGTGTCCT TTCCTCTTCT ACCTCACCTA TCAGCATGGA GTCTGCAGTC 
AAGCTGGAAT GTTCAGAATC ACCAGCCACA AGCACACAAT TGCCACATTG A

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

CloneID ODa34641
Clone ID Related Accession (Same CDS sequence) XM_021476094.1 , XM_009301821.2 , NM_001004557.1
Accession Version XM_009301821.2 Latest version! Documents for ORF clone product in default vector
Sequence Information ORF Nucleotide Sequence (Length: 1911bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ™ Seamless cloning technology
Insert Structure linear
Update Date 2016-06-23
Organism Danio rerio(Zebrafish)
Product transcription initiation factor TFIID subunit 6 isoform X1
Comment MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007116.6) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 24, 2016 this sequence version replaced XM_009301821.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
1441
1501
1561
1621
1681
1741
1801
1861
ATGGCAGAGG AACGCAGACA GAAGCTGTGT TCTGTGATCC TGCCCACTGA TTCCATGAAG 
GCAATGGCTG AGTCGGTGGG TATAGGCTCA CTGCAGGAAG ACAGCTGTCT GACCCTCAGT 
GAAGAAGTTA GCTACAGGAT CAAAGAGATT GCACAGGATG CATTGAAGTT TATGCACCAT 
GGGAAAAGAT GCAAACTTAC AACTGGTGAC ATTGATCATG CCCTTAAACT GAAAAATGTG 
GAGCCACTGT ATGGATTCCA GTCCGAGGAG TTCATCCCAT TTCGCTTTGC AAGTGGAGGT 
GGCAGAGAAT TGCACTTTTA TGAAGAAAAA GAAGTGGATC TTAGTGACAT CATTAATACA 
CCCTTGCCTC GTGTACCTTT AGACGTTTCA CTAAAAGCTC ACTGGCTAAG TATAGATGGT 
GTCCAGCCTG CAATTCCAGA GAACCCACCT TCTGCTTCTA AAGAGCAGCA GAAGGCAGAG 
TCTACTGAGC CGCTTAAAGC TGTCAAACCT GGACAGGAAG ACGAAGGCTT TATTCAAGCC 
AAGGGTCAGA GTGCAGTTTC TGCTGAAGTC AAAGGAAAGG AAAAGATGCG GATGAAACCA 
CGTAGCACAC ATGAGCTCTC TGTGGAGCAG CAGTTGTACT ATAAAGAAAT TACTGAAGCC 
TGTGTGGGAT CCTGTGAAGC CAAAAGAGCG GAGGCACTGC AGAGCATAGC CACCGACCCA 
GGGCTGTACC AAATGCTGCC AAGGTTCAGT ACCTTCATCT CGGAGGGTGT GCGTGTAAAT 
GTTGTTCAGA ATAACTTGGC TTTGCTGATA TATTTGATGA GGATGGTGAA GGCTCTAATG 
GACAATCCAA CTCTATATTT GGAGAAATAT CTCCATGAGT TGATCCCCGC GGTGGTGACA 
TGTATTGTGA GTAAGCAACT GTGTTTGAGG CCTGATGTAG ACAATCACTG GGCTCTGCGA 
GACTTTGCTG CCCGGTTAAT GGCTCAGAGC TGCAAAACAT TCAGCACCAC AACCAACAAC 
ATCCAGTCGC GTATCACCAA AACCTTTACT AAGGCATTGT TGGATGAAAA GACTCAGTGG 
ACAACTCGTT ATGGCTGCAT TGCTGGACTT GCTGAACTTG GGCATGATGT GATAAAGACT 
TTGATCATCC CCCGACTGTT TGTAGAGGGT GCCCGTATTA AAGCAGTGAT GGATGGGCCA 
GTGGTATCCA ATATTGATAA GATTGGAGCT GATCATGTCC AGAGTCTATT ACTGAAACAT 
TGTGCAAGTG TGGTTGCTAA AACTAGGCCG GTCCCAGATC TGGTGGAGCA ATACAAAGCA 
GATTATGGTT ATCTGGGCAC TATGCTATGT TCACATGTGG TGAAGGCCCG TGCACAGGCT 
GCCTTTCAGG CCCAAACTGT TAACAGAACC ACACTTACTA TCACACAGCC ACGTCCGACT 
TTGACAATGT CTCAGAGTGG ATTGTCAACA TCAGGTGTTT CACGTACACC CAGCATAATT 
AAAGTACCCA GTTCACTTAC CCTCATGTCT ACTCGACCTG GAACACCCAC TCAGCCATCA 
CCCCCAGCAA CAAAGTATAT TGTTATGGCA ACAAGTGCAG GGGCTGCATC CACACAGCAG 
GTAATCACTC TCAGCTCCTC TCAGTCTGGA TCCCCTGTCA CAAGTACAGT CCCCAGCACA 
CCAACAAGTC TACAGCCACT CGTCAAACTG GAGTCTGGAA ATCCAGGTGC TGTGGGCAGC 
TCACGCCCAA TCCAGAAATA TATTGTGGTG TCTTTGCCTT CATCCTCTTC ATCAATGGAT 
AATAAGGGCT CAGGTGTCCT TTCCTCTTCT ACCTCACCTA TCAGCATGGA GTCTGCAGTC 
AAGCTGGAAT GTTCAGAATC ACCAGCCACA AGCACACAAT TGCCACATTG A

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq XP_009300096.1
CDS24..1934
Translation

Target ORF information:

RefSeq Version XM_009301821.2
Organism Danio rerio(Zebrafish)
Definition Danio rerio TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor (taf6), transcript variant X1, mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
 XM_009301821.2

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
1441
1501
1561
1621
1681
1741
1801
1861
ATGGCAGAGG AACGCAGACA GAAGCTGTGT TCTGTGATCC TGCCCACTGA TTCCATGAAG 
GCAATGGCTG AGTCGGTGGG TATAGGCTCA CTGCAGGAAG ACAGCTGTCT GACCCTCAGT 
GAAGAAGTTA GCTACAGGAT CAAAGAGATT GCACAGGATG CATTGAAGTT TATGCACCAT 
GGGAAAAGAT GCAAACTTAC AACTGGTGAC ATTGATCATG CCCTTAAACT GAAAAATGTG 
GAGCCACTGT ATGGATTCCA GTCCGAGGAG TTCATCCCAT TTCGCTTTGC AAGTGGAGGT 
GGCAGAGAAT TGCACTTTTA TGAAGAAAAA GAAGTGGATC TTAGTGACAT CATTAATACA 
CCCTTGCCTC GTGTACCTTT AGACGTTTCA CTAAAAGCTC ACTGGCTAAG TATAGATGGT 
GTCCAGCCTG CAATTCCAGA GAACCCACCT TCTGCTTCTA AAGAGCAGCA GAAGGCAGAG 
TCTACTGAGC CGCTTAAAGC TGTCAAACCT GGACAGGAAG ACGAAGGCTT TATTCAAGCC 
AAGGGTCAGA GTGCAGTTTC TGCTGAAGTC AAAGGAAAGG AAAAGATGCG GATGAAACCA 
CGTAGCACAC ATGAGCTCTC TGTGGAGCAG CAGTTGTACT ATAAAGAAAT TACTGAAGCC 
TGTGTGGGAT CCTGTGAAGC CAAAAGAGCG GAGGCACTGC AGAGCATAGC CACCGACCCA 
GGGCTGTACC AAATGCTGCC AAGGTTCAGT ACCTTCATCT CGGAGGGTGT GCGTGTAAAT 
GTTGTTCAGA ATAACTTGGC TTTGCTGATA TATTTGATGA GGATGGTGAA GGCTCTAATG 
GACAATCCAA CTCTATATTT GGAGAAATAT CTCCATGAGT TGATCCCCGC GGTGGTGACA 
TGTATTGTGA GTAAGCAACT GTGTTTGAGG CCTGATGTAG ACAATCACTG GGCTCTGCGA 
GACTTTGCTG CCCGGTTAAT GGCTCAGAGC TGCAAAACAT TCAGCACCAC AACCAACAAC 
ATCCAGTCGC GTATCACCAA AACCTTTACT AAGGCATTGT TGGATGAAAA GACTCAGTGG 
ACAACTCGTT ATGGCTGCAT TGCTGGACTT GCTGAACTTG GGCATGATGT GATAAAGACT 
TTGATCATCC CCCGACTGTT TGTAGAGGGT GCCCGTATTA AAGCAGTGAT GGATGGGCCA 
GTGGTATCCA ATATTGATAA GATTGGAGCT GATCATGTCC AGAGTCTATT ACTGAAACAT 
TGTGCAAGTG TGGTTGCTAA AACTAGGCCG GTCCCAGATC TGGTGGAGCA ATACAAAGCA 
GATTATGGTT ATCTGGGCAC TATGCTATGT TCACATGTGG TGAAGGCCCG TGCACAGGCT 
GCCTTTCAGG CCCAAACTGT TAACAGAACC ACACTTACTA TCACACAGCC ACGTCCGACT 
TTGACAATGT CTCAGAGTGG ATTGTCAACA TCAGGTGTTT CACGTACACC CAGCATAATT 
AAAGTACCCA GTTCACTTAC CCTCATGTCT ACTCGACCTG GAACACCCAC TCAGCCATCA 
CCCCCAGCAA CAAAGTATAT TGTTATGGCA ACAAGTGCAG GGGCTGCATC CACACAGCAG 
GTAATCACTC TCAGCTCCTC TCAGTCTGGA TCCCCTGTCA CAAGTACAGT CCCCAGCACA 
CCAACAAGTC TACAGCCACT CGTCAAACTG GAGTCTGGAA ATCCAGGTGC TGTGGGCAGC 
TCACGCCCAA TCCAGAAATA TATTGTGGTG TCTTTGCCTT CATCCTCTTC ATCAATGGAT 
AATAAGGGCT CAGGTGTCCT TTCCTCTTCT ACCTCACCTA TCAGCATGGA GTCTGCAGTC 
AAGCTGGAAT GTTCAGAATC ACCAGCCACA AGCACACAAT TGCCACATTG A

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

PubMed

book

Quantitative mass spectrometry of TATA binding protein-containing complexes and subunit phosphorylations during the cell cycle.
Proteome science746(2009 Dec)
Pijnappel WP,Kolkman A,Baltissen MP,Heck AJ,Timmers HM


book

The zebrafish gene map defines ancestral vertebrate chromosomes.
Genome research15(9)1307-14(2005 Sep)
Woods IG,Wilson C,Friedlander B,Chang P,Reyes DK,Nix R,Kelly PD,Chu F,Postlethwait JH,Talbot WS