Gene Symbol |
BBIP1 |
Entrez Gene ID |
450736 |
Full Name |
BBSome interacting protein 1 |
Synonyms |
NCRNA00081 |
General protein information |
- Preferred Names
BBSome interacting protein 1
Names
BBSome-interacting protein 1
|
Gene Type |
protein-coding |
Organism |
Pan troglodytes(chimpanzee) |
mRNA and Protein(s)
mRNA |
Protein |
Name |
XM_016962423.1 |
XP_016817912.1 |
BBSome-interacting protein 1 isoform X2 |
XM_009459177.3 |
XP_009457452.1 |
BBSome-interacting protein 1 isoform X1 |
XM_009459178.3 |
XP_009457453.1 |
BBSome-interacting protein 1 isoform X2 |
XM_009459179.3 |
XP_009457454.1 |
BBSome-interacting protein 1 isoform X2 |
XM_009459177.2 |
XP_009457452.1 |
BBSome-interacting protein 1 isoform X1 |
XM_016962423.2 |
XP_016817912.1 |
BBSome-interacting protein 1 isoform X2 |
XM_009459179.2 |
XP_009457454.1 |
BBSome-interacting protein 1 isoform X2 |
NM_001280347.1 |
NP_001267276.1 |
BBSome-interacting protein 1 |
XM_009459178.2 |
XP_009457453.1 |
BBSome-interacting protein 1 isoform X2 |
Pan troglodytes (chimpanzee) |
BBIP1 |
XP_003951800.1 |
Canis lupus familiaris (dog) |
BBIP1 |
XP_003433670.1 |
Mus musculus (house mouse) |
Bbip1 |
NP_001182267.1 |
Xenopus tropicalis (tropical clawed frog) |
bbip1 |
XP_004915782.1 |
Homo sapiens (human) |
BBIP1 |
NP_001182235.1 |
Bos taurus (cattle) |
BBIP1 |
XP_003587939.1 |
Rattus norvegicus (Norway rat) |
LOC100910342 |
XP_006231683.1 |
Danio rerio (zebrafish) |
bbip1 |
NP_001159595.1 |
Related articles in PubMed
Major chimpanzee-specific structural changes in sperm development-associated genes.
Kim RN, Kim DW, Choi SH, Chae SH, Nam SH, Kim DW, Kim A, Kang A, Park KH, Lee YS, Hirai M, Suzuki Y, Sugano S, Hashimoto K, Kim DS, Park HS
Functional & integrative genomics11(3)507-17(2011 Sep)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following BBIP1 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the BBIP1 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID |
OPc01316 |
Clone ID Related Accession (Same CDS sequence) |
XM_009459177.3
, XM_009459177.2
, NM_001280347.1
|
Accession Version |
NM_001280347.1 Latest version! |
Documents for ORF clone product in default vector |
Sequence Information |
ORF Nucleotide Sequence (Length: 279bp)
Protein sequence
SNP |
Vector |
pcDNA3.1+/C-(K)DYK or customized vector |
User Manual |
Clone information |
Clone Map |
MSDS |
Tag on pcDNA3.1+/C-(K)DYK |
C terminal DYKDDDDK tags |
ORF Insert Method |
CloneEZ™ Seamless cloning technology |
Insert Structure |
linear |
Update Date |
2016-09-20 |
Organism |
Pan troglodytes(chimpanzee) |
Product |
BBSome-interacting protein 1 |
Comment |
Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from AK305123.1. On or before Jul 22, 2013 this sequence version replaced XM_003951751.1, XM_003951752.1, XM_003951753.1, XM_003951754.1, XM_003951755.1, XM_003951756.1, XM_003951757.1.
##Evidence-Data-START##
Transcript exon combination :: AK305123.1 [ECO:0000332]
RNAseq introns :: single sample supports all introns SAMN03854167, SAMN03854168 [ECO:0000348]
##Evidence-Data-END##
|
1 61 121 181 241
| ATGCTTAAAG CTGCAGCAAA AAGACCAGAA CTTTCAGGAA AAAACACTAT ATCCAACAAC TCAGATATGG CGGAAGTGAA GTCAATGTTC CGGGAAGTTC TTCCAAAGCA AGGGCCATTG TTTGTGGAAG ATATAACGAC AATGGTGCTG TGTAAACCCA AACTTTTACC CTTAAAATCT CTGACTCTGG AAAAACTAGA GAAAATGCAT CAAGCAGCAC AGAATACAAT TCGCCAACAA GAAATGGCAG AAAAGGATCA ACGGCAAATA ACCCACTGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq |
NP_001267276.1 |
CDS | 105..383 |
Translation | |
Target ORF information:
RefSeq Version | NM_001280347.1 |
Organism | Pan troglodytes(chimpanzee) |
Definition | Pan troglodytes BBSome interacting protein 1 (BBIP1), mRNA. |
Target ORF information:
Epitope | DYKDDDDK |
Bacterial selection | AMPR |
Mammalian selection | NeoR |
Vector | pcDNA3.1+/C-(K)DYK |
|
NM_001280347.1 |
ORF Insert Sequence:
1 61 121 181 241
| ATGCTTAAAG CTGCAGCAAA AAGACCAGAA CTTTCAGGAA AAAACACTAT ATCCAACAAC TCAGATATGG CGGAAGTGAA GTCAATGTTC CGGGAAGTTC TTCCAAAGCA AGGGCCATTG TTTGTGGAAG ATATAACGAC AATGGTGCTG TGTAAACCCA AACTTTTACC CTTAAAATCT CTGACTCTGG AAAAACTAGA GAAAATGCAT CAAGCAGCAC AGAATACAAT TCGCCAACAA GAAATGGCAG AAAAGGATCA ACGGCAAATA ACCCACTGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID |
OPc01316 |
Clone ID Related Accession (Same CDS sequence) |
XM_009459177.3
, XM_009459177.2
, NM_001280347.1
|
Accession Version |
XM_009459177.3 Latest version! |
Documents for ORF clone product in default vector |
Sequence Information |
ORF Nucleotide Sequence (Length: 279bp)
Protein sequence
SNP |
Vector |
pcDNA3.1+/C-(K)DYK or customized vector |
User Manual |
Clone information |
Clone Map |
MSDS |
Tag on pcDNA3.1+/C-(K)DYK |
C terminal DYKDDDDK tags |
ORF Insert Method |
CloneEZ™ Seamless cloning technology |
Insert Structure |
linear |
Update Date |
2018-03-19 |
Organism |
Pan troglodytes(chimpanzee) |
Product |
BBSome-interacting protein 1 isoform X1 |
Comment |
Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_036889.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process
On Mar 20, 2018 this sequence version replaced XM_009459177.2.
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Status :: Full annotation
Annotation Name :: Pan troglodytes Annotation Release 105
Annotation Version :: 105
Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline
Annotation Software Version :: 8.0
Annotation Method :: Best-placed RefSeq; Gnomon
Features Annotated :: Gene; mRNA; CDS; ncRNA
##Genome-Annotation-Data-END##
|
1 61 121 181 241
| ATGCTTAAAG CTGCAGCAAA AAGACCAGAA CTTTCAGGAA AAAACACTAT ATCCAACAAC TCAGATATGG CGGAAGTGAA GTCAATGTTC CGGGAAGTTC TTCCAAAGCA AGGGCCATTG TTTGTGGAAG ATATAACGAC AATGGTGCTG TGTAAACCCA AACTTTTACC CTTAAAATCT CTGACTCTGG AAAAACTAGA GAAAATGCAT CAAGCAGCAC AGAATACAAT TCGCCAACAA GAAATGGCAG AAAAGGATCA ACGGCAAATA ACCCACTGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq |
XP_009457452.1 |
CDS | 303..581 |
Translation | |
Target ORF information:
RefSeq Version | XM_009459177.3 |
Organism | Pan troglodytes(chimpanzee) |
Definition | Pan troglodytes BBSome interacting protein 1 (BBIP1), transcript variant X1, mRNA. |
Target ORF information:
Epitope | DYKDDDDK |
Bacterial selection | AMPR |
Mammalian selection | NeoR |
Vector | pcDNA3.1+/C-(K)DYK |
|
XM_009459177.3 |
ORF Insert Sequence:
1 61 121 181 241
| ATGCTTAAAG CTGCAGCAAA AAGACCAGAA CTTTCAGGAA AAAACACTAT ATCCAACAAC TCAGATATGG CGGAAGTGAA GTCAATGTTC CGGGAAGTTC TTCCAAAGCA AGGGCCATTG TTTGTGGAAG ATATAACGAC AATGGTGCTG TGTAAACCCA AACTTTTACC CTTAAAATCT CTGACTCTGG AAAAACTAGA GAAAATGCAT CAAGCAGCAC AGAATACAAT TCGCCAACAA GAAATGGCAG AAAAGGATCA ACGGCAAATA ACCCACTGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID |
OPc01316 |
Clone ID Related Accession (Same CDS sequence) |
XM_009459177.3
, XM_009459177.2
, NM_001280347.1
|
Accession Version |
XM_009459177.2 |
Documents for ORF clone product in default vector |
Sequence Information |
ORF Nucleotide Sequence (Length: 279bp)
Protein sequence
SNP |
Vector |
pcDNA3.1+/C-(K)DYK or customized vector |
User Manual |
Clone information |
Clone Map |
MSDS |
Tag on pcDNA3.1+/C-(K)DYK |
C terminal DYKDDDDK tags |
ORF Insert Method |
CloneEZ™ Seamless cloning technology |
Insert Structure |
linear |
Update Date |
2016-06-01 |
Organism |
Pan troglodytes(chimpanzee) |
Product |
BBSome-interacting protein 1 isoform X1 |
Comment |
Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_006477.4) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process
On Jun 2, 2016 this sequence version replaced XM_009459177.1.
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Status :: Full annotation
Annotation Version :: Pan troglodytes Annotation Release 104
Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline
Annotation Software Version :: 7.0
Annotation Method :: Best-placed RefSeq; Gnomon
Features Annotated :: Gene; mRNA; CDS; ncRNA
##Genome-Annotation-Data-END##
|
1 61 121 181 241
| ATGCTTAAAG CTGCAGCAAA AAGACCAGAA CTTTCAGGAA AAAACACTAT ATCCAACAAC TCAGATATGG CGGAAGTGAA GTCAATGTTC CGGGAAGTTC TTCCAAAGCA AGGGCCATTG TTTGTGGAAG ATATAACGAC AATGGTGCTG TGTAAACCCA AACTTTTACC CTTAAAATCT CTGACTCTGG AAAAACTAGA GAAAATGCAT CAAGCAGCAC AGAATACAAT TCGCCAACAA GAAATGGCAG AAAAGGATCA ACGGCAAATA ACCCACTGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq |
XP_009457452.1 |
CDS | 307..585 |
Translation | |
Target ORF information:
RefSeq Version | XM_009459177.2 |
Organism | Pan troglodytes(chimpanzee) |
Definition | Pan troglodytes BBSome interacting protein 1 (BBIP1), transcript variant X1, mRNA. |
Target ORF information:
Epitope | DYKDDDDK |
Bacterial selection | AMPR |
Mammalian selection | NeoR |
Vector | pcDNA3.1+/C-(K)DYK |
|
XM_009459177.2 |
ORF Insert Sequence:
1 61 121 181 241
| ATGCTTAAAG CTGCAGCAAA AAGACCAGAA CTTTCAGGAA AAAACACTAT ATCCAACAAC TCAGATATGG CGGAAGTGAA GTCAATGTTC CGGGAAGTTC TTCCAAAGCA AGGGCCATTG TTTGTGGAAG ATATAACGAC AATGGTGCTG TGTAAACCCA AACTTTTACC CTTAAAATCT CTGACTCTGG AAAAACTAGA GAAAATGCAT CAAGCAGCAC AGAATACAAT TCGCCAACAA GAAATGGCAG AAAAGGATCA ACGGCAAATA ACCCACTGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID |
OPc29804 |
Clone ID Related Accession (Same CDS sequence) |
XM_016962423.1
, XM_009459178.3
, XM_009459179.3
, XM_016962423.2
, XM_009459179.2
, XM_009459178.2
|
Accession Version |
XM_016962423.1 |
Documents for ORF clone product in default vector |
Sequence Information |
ORF Nucleotide Sequence (Length: 213bp)
Protein sequence
SNP |
Vector |
pcDNA3.1+/C-(K)DYK or customized vector |
User Manual |
Clone information |
Clone Map |
MSDS |
Tag on pcDNA3.1+/C-(K)DYK |
C terminal DYKDDDDK tags |
ORF Insert Method |
CloneEZ™ Seamless cloning technology |
Insert Structure |
linear |
Update Date |
2016-06-01 |
Organism |
Pan troglodytes(chimpanzee) |
Product |
BBSome-interacting protein 1 isoform X2 |
Comment |
Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_006477.4) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Status :: Full annotation
Annotation Version :: Pan troglodytes Annotation Release 104
Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline
Annotation Software Version :: 7.0
Annotation Method :: Best-placed RefSeq; Gnomon
Features Annotated :: Gene; mRNA; CDS; ncRNA
##Genome-Annotation-Data-END##
|
1 61 121 181
| ATGGCGGAAG TGAAGTCAAT GTTCCGGGAA GTTCTTCCAA AGCAAGGGCC ATTGTTTGTG GAAGATATAA CGACAATGGT GCTGTGTAAA CCCAAACTTT TACCCTTAAA ATCTCTGACT CTGGAAAAAC TAGAGAAAAT GCATCAAGCA GCACAGAATA CAATTCGCCA ACAAGAAATG GCAGAAAAGG ATCAACGGCA AATAACCCAC TGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq |
XP_016817912.1 |
CDS | 597..809 |
Translation | |
Target ORF information:
RefSeq Version | XM_016962423.1 |
Organism | Pan troglodytes(chimpanzee) |
Definition | Pan troglodytes BBSome interacting protein 1 (BBIP1), transcript variant X2, mRNA. |
Target ORF information:
Epitope | DYKDDDDK |
Bacterial selection | AMPR |
Mammalian selection | NeoR |
Vector | pcDNA3.1+/C-(K)DYK |
|
XM_016962423.1 |
ORF Insert Sequence:
1 61 121 181
| ATGGCGGAAG TGAAGTCAAT GTTCCGGGAA GTTCTTCCAA AGCAAGGGCC ATTGTTTGTG GAAGATATAA CGACAATGGT GCTGTGTAAA CCCAAACTTT TACCCTTAAA ATCTCTGACT CTGGAAAAAC TAGAGAAAAT GCATCAAGCA GCACAGAATA CAATTCGCCA ACAAGAAATG GCAGAAAAGG ATCAACGGCA AATAACCCAC TGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID |
OPc29804 |
Clone ID Related Accession (Same CDS sequence) |
XM_016962423.1
, XM_009459178.3
, XM_009459179.3
, XM_016962423.2
, XM_009459179.2
, XM_009459178.2
|
Accession Version |
XM_009459178.3 Latest version! |
Documents for ORF clone product in default vector |
Sequence Information |
ORF Nucleotide Sequence (Length: 213bp)
Protein sequence
SNP |
Vector |
pcDNA3.1+/C-(K)DYK or customized vector |
User Manual |
Clone information |
Clone Map |
MSDS |
Tag on pcDNA3.1+/C-(K)DYK |
C terminal DYKDDDDK tags |
ORF Insert Method |
CloneEZ™ Seamless cloning technology |
Insert Structure |
linear |
Update Date |
2018-03-19 |
Organism |
Pan troglodytes(chimpanzee) |
Product |
BBSome-interacting protein 1 isoform X2 |
Comment |
Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_036889.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process
On Mar 20, 2018 this sequence version replaced XM_009459178.2.
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Status :: Full annotation
Annotation Name :: Pan troglodytes Annotation Release 105
Annotation Version :: 105
Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline
Annotation Software Version :: 8.0
Annotation Method :: Best-placed RefSeq; Gnomon
Features Annotated :: Gene; mRNA; CDS; ncRNA
##Genome-Annotation-Data-END##
|
1 61 121 181
| ATGGCGGAAG TGAAGTCAAT GTTCCGGGAA GTTCTTCCAA AGCAAGGGCC ATTGTTTGTG GAAGATATAA CGACAATGGT GCTGTGTAAA CCCAAACTTT TACCCTTAAA ATCTCTGACT CTGGAAAAAC TAGAGAAAAT GCATCAAGCA GCACAGAATA CAATTCGCCA ACAAGAAATG GCAGAAAAGG ATCAACGGCA AATAACCCAC TGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq |
XP_009457453.1 |
CDS | 271..483 |
Translation | |
Target ORF information:
RefSeq Version | XM_009459178.3 |
Organism | Pan troglodytes(chimpanzee) |
Definition | Pan troglodytes BBSome interacting protein 1 (BBIP1), transcript variant X3, mRNA. |
Target ORF information:
Epitope | DYKDDDDK |
Bacterial selection | AMPR |
Mammalian selection | NeoR |
Vector | pcDNA3.1+/C-(K)DYK |
|
XM_009459178.3 |
ORF Insert Sequence:
1 61 121 181
| ATGGCGGAAG TGAAGTCAAT GTTCCGGGAA GTTCTTCCAA AGCAAGGGCC ATTGTTTGTG GAAGATATAA CGACAATGGT GCTGTGTAAA CCCAAACTTT TACCCTTAAA ATCTCTGACT CTGGAAAAAC TAGAGAAAAT GCATCAAGCA GCACAGAATA CAATTCGCCA ACAAGAAATG GCAGAAAAGG ATCAACGGCA AATAACCCAC TGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID |
OPc29804 |
Clone ID Related Accession (Same CDS sequence) |
XM_016962423.1
, XM_009459178.3
, XM_009459179.3
, XM_016962423.2
, XM_009459179.2
, XM_009459178.2
|
Accession Version |
XM_009459179.3 Latest version! |
Documents for ORF clone product in default vector |
Sequence Information |
ORF Nucleotide Sequence (Length: 213bp)
Protein sequence
SNP |
Vector |
pcDNA3.1+/C-(K)DYK or customized vector |
User Manual |
Clone information |
Clone Map |
MSDS |
Tag on pcDNA3.1+/C-(K)DYK |
C terminal DYKDDDDK tags |
ORF Insert Method |
CloneEZ™ Seamless cloning technology |
Insert Structure |
linear |
Update Date |
2018-03-19 |
Organism |
Pan troglodytes(chimpanzee) |
Product |
BBSome-interacting protein 1 isoform X2 |
Comment |
Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_036889.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process
On Mar 20, 2018 this sequence version replaced XM_009459179.2.
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Status :: Full annotation
Annotation Name :: Pan troglodytes Annotation Release 105
Annotation Version :: 105
Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline
Annotation Software Version :: 8.0
Annotation Method :: Best-placed RefSeq; Gnomon
Features Annotated :: Gene; mRNA; CDS; ncRNA
##Genome-Annotation-Data-END##
|
1 61 121 181
| ATGGCGGAAG TGAAGTCAAT GTTCCGGGAA GTTCTTCCAA AGCAAGGGCC ATTGTTTGTG GAAGATATAA CGACAATGGT GCTGTGTAAA CCCAAACTTT TACCCTTAAA ATCTCTGACT CTGGAAAAAC TAGAGAAAAT GCATCAAGCA GCACAGAATA CAATTCGCCA ACAAGAAATG GCAGAAAAGG ATCAACGGCA AATAACCCAC TGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq |
XP_009457454.1 |
CDS | 53..265 |
Translation | |
Target ORF information:
RefSeq Version | XM_009459179.3 |
Organism | Pan troglodytes(chimpanzee) |
Definition | Pan troglodytes BBSome interacting protein 1 (BBIP1), transcript variant X4, mRNA. |
Target ORF information:
Epitope | DYKDDDDK |
Bacterial selection | AMPR |
Mammalian selection | NeoR |
Vector | pcDNA3.1+/C-(K)DYK |
|
XM_009459179.3 |
ORF Insert Sequence:
1 61 121 181
| ATGGCGGAAG TGAAGTCAAT GTTCCGGGAA GTTCTTCCAA AGCAAGGGCC ATTGTTTGTG GAAGATATAA CGACAATGGT GCTGTGTAAA CCCAAACTTT TACCCTTAAA ATCTCTGACT CTGGAAAAAC TAGAGAAAAT GCATCAAGCA GCACAGAATA CAATTCGCCA ACAAGAAATG GCAGAAAAGG ATCAACGGCA AATAACCCAC TGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID |
OPc29804 |
Clone ID Related Accession (Same CDS sequence) |
XM_016962423.1
, XM_009459178.3
, XM_009459179.3
, XM_016962423.2
, XM_009459179.2
, XM_009459178.2
|
Accession Version |
XM_016962423.2 Latest version! |
Documents for ORF clone product in default vector |
Sequence Information |
ORF Nucleotide Sequence (Length: 213bp)
Protein sequence
SNP |
Vector |
pcDNA3.1+/C-(K)DYK or customized vector |
User Manual |
Clone information |
Clone Map |
MSDS |
Tag on pcDNA3.1+/C-(K)DYK |
C terminal DYKDDDDK tags |
ORF Insert Method |
CloneEZ™ Seamless cloning technology |
Insert Structure |
linear |
Update Date |
2018-03-19 |
Organism |
Pan troglodytes(chimpanzee) |
Product |
BBSome-interacting protein 1 isoform X2 |
Comment |
Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_036889.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process
On Mar 20, 2018 this sequence version replaced XM_016962423.1.
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Status :: Full annotation
Annotation Name :: Pan troglodytes Annotation Release 105
Annotation Version :: 105
Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline
Annotation Software Version :: 8.0
Annotation Method :: Best-placed RefSeq; Gnomon
Features Annotated :: Gene; mRNA; CDS; ncRNA
##Genome-Annotation-Data-END##
|
1 61 121 181
| ATGGCGGAAG TGAAGTCAAT GTTCCGGGAA GTTCTTCCAA AGCAAGGGCC ATTGTTTGTG GAAGATATAA CGACAATGGT GCTGTGTAAA CCCAAACTTT TACCCTTAAA ATCTCTGACT CTGGAAAAAC TAGAGAAAAT GCATCAAGCA GCACAGAATA CAATTCGCCA ACAAGAAATG GCAGAAAAGG ATCAACGGCA AATAACCCAC TGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq |
XP_016817912.1 |
CDS | 323..535 |
Translation | |
Target ORF information:
RefSeq Version | XM_016962423.2 |
Organism | Pan troglodytes(chimpanzee) |
Definition | Pan troglodytes BBSome interacting protein 1 (BBIP1), transcript variant X2, mRNA. |
Target ORF information:
Epitope | DYKDDDDK |
Bacterial selection | AMPR |
Mammalian selection | NeoR |
Vector | pcDNA3.1+/C-(K)DYK |
|
XM_016962423.2 |
ORF Insert Sequence:
1 61 121 181
| ATGGCGGAAG TGAAGTCAAT GTTCCGGGAA GTTCTTCCAA AGCAAGGGCC ATTGTTTGTG GAAGATATAA CGACAATGGT GCTGTGTAAA CCCAAACTTT TACCCTTAAA ATCTCTGACT CTGGAAAAAC TAGAGAAAAT GCATCAAGCA GCACAGAATA CAATTCGCCA ACAAGAAATG GCAGAAAAGG ATCAACGGCA AATAACCCAC TGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID |
OPc29804 |
Clone ID Related Accession (Same CDS sequence) |
XM_016962423.1
, XM_009459178.3
, XM_009459179.3
, XM_016962423.2
, XM_009459179.2
, XM_009459178.2
|
Accession Version |
XM_009459179.2 |
Documents for ORF clone product in default vector |
Sequence Information |
ORF Nucleotide Sequence (Length: 213bp)
Protein sequence
SNP |
Vector |
pcDNA3.1+/C-(K)DYK or customized vector |
User Manual |
Clone information |
Clone Map |
MSDS |
Tag on pcDNA3.1+/C-(K)DYK |
C terminal DYKDDDDK tags |
ORF Insert Method |
CloneEZ™ Seamless cloning technology |
Insert Structure |
linear |
Update Date |
2016-06-01 |
Organism |
Pan troglodytes(chimpanzee) |
Product |
BBSome-interacting protein 1 isoform X2 |
Comment |
Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_006477.4) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process
On Jun 2, 2016 this sequence version replaced XM_009459179.1.
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Status :: Full annotation
Annotation Version :: Pan troglodytes Annotation Release 104
Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline
Annotation Software Version :: 7.0
Annotation Method :: Best-placed RefSeq; Gnomon
Features Annotated :: Gene; mRNA; CDS; ncRNA
##Genome-Annotation-Data-END##
|
1 61 121 181
| ATGGCGGAAG TGAAGTCAAT GTTCCGGGAA GTTCTTCCAA AGCAAGGGCC ATTGTTTGTG GAAGATATAA CGACAATGGT GCTGTGTAAA CCCAAACTTT TACCCTTAAA ATCTCTGACT CTGGAAAAAC TAGAGAAAAT GCATCAAGCA GCACAGAATA CAATTCGCCA ACAAGAAATG GCAGAAAAGG ATCAACGGCA AATAACCCAC TGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq |
XP_009457454.1 |
CDS | 53..265 |
Translation | |
Target ORF information:
RefSeq Version | XM_009459179.2 |
Organism | Pan troglodytes(chimpanzee) |
Definition | Pan troglodytes BBSome interacting protein 1 (BBIP1), transcript variant X4, mRNA. |
Target ORF information:
Epitope | DYKDDDDK |
Bacterial selection | AMPR |
Mammalian selection | NeoR |
Vector | pcDNA3.1+/C-(K)DYK |
|
XM_009459179.2 |
ORF Insert Sequence:
1 61 121 181
| ATGGCGGAAG TGAAGTCAAT GTTCCGGGAA GTTCTTCCAA AGCAAGGGCC ATTGTTTGTG GAAGATATAA CGACAATGGT GCTGTGTAAA CCCAAACTTT TACCCTTAAA ATCTCTGACT CTGGAAAAAC TAGAGAAAAT GCATCAAGCA GCACAGAATA CAATTCGCCA ACAAGAAATG GCAGAAAAGG ATCAACGGCA AATAACCCAC TGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID |
OPc29804 |
Clone ID Related Accession (Same CDS sequence) |
XM_016962423.1
, XM_009459178.3
, XM_009459179.3
, XM_016962423.2
, XM_009459179.2
, XM_009459178.2
|
Accession Version |
XM_009459178.2 |
Documents for ORF clone product in default vector |
Sequence Information |
ORF Nucleotide Sequence (Length: 213bp)
Protein sequence
SNP |
Vector |
pcDNA3.1+/C-(K)DYK or customized vector |
User Manual |
Clone information |
Clone Map |
MSDS |
Tag on pcDNA3.1+/C-(K)DYK |
C terminal DYKDDDDK tags |
ORF Insert Method |
CloneEZ™ Seamless cloning technology |
Insert Structure |
linear |
Update Date |
2016-06-01 |
Organism |
Pan troglodytes(chimpanzee) |
Product |
BBSome-interacting protein 1 isoform X2 |
Comment |
Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_006477.4) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process
On Jun 2, 2016 this sequence version replaced XM_009459178.1.
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Status :: Full annotation
Annotation Version :: Pan troglodytes Annotation Release 104
Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline
Annotation Software Version :: 7.0
Annotation Method :: Best-placed RefSeq; Gnomon
Features Annotated :: Gene; mRNA; CDS; ncRNA
##Genome-Annotation-Data-END##
|
1 61 121 181
| ATGGCGGAAG TGAAGTCAAT GTTCCGGGAA GTTCTTCCAA AGCAAGGGCC ATTGTTTGTG GAAGATATAA CGACAATGGT GCTGTGTAAA CCCAAACTTT TACCCTTAAA ATCTCTGACT CTGGAAAAAC TAGAGAAAAT GCATCAAGCA GCACAGAATA CAATTCGCCA ACAAGAAATG GCAGAAAAGG ATCAACGGCA AATAACCCAC TGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq |
XP_009457453.1 |
CDS | 346..558 |
Translation | |
Target ORF information:
RefSeq Version | XM_009459178.2 |
Organism | Pan troglodytes(chimpanzee) |
Definition | Pan troglodytes BBSome interacting protein 1 (BBIP1), transcript variant X3, mRNA. |
Target ORF information:
Epitope | DYKDDDDK |
Bacterial selection | AMPR |
Mammalian selection | NeoR |
Vector | pcDNA3.1+/C-(K)DYK |
|
XM_009459178.2 |
ORF Insert Sequence:
1 61 121 181
| ATGGCGGAAG TGAAGTCAAT GTTCCGGGAA GTTCTTCCAA AGCAAGGGCC ATTGTTTGTG GAAGATATAA CGACAATGGT GCTGTGTAAA CCCAAACTTT TACCCTTAAA ATCTCTGACT CTGGAAAAAC TAGAGAAAAT GCATCAAGCA GCACAGAATA CAATTCGCCA ACAAGAAATG GCAGAAAAGG ATCAACGGCA AATAACCCAC TGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
 |
Major chimpanzee-specific structural changes in sperm development-associated genes.
Functional & integrative genomics11(3)507-17(2011 Sep)
Kim RN,Kim DW,Choi SH,Chae SH,Nam SH,Kim DW,Kim A,Kang A,Park KH,Lee YS,Hirai M,Suzuki Y,Sugano S,Hashimoto K,Kim DS,Park HS |