Gene Symbol | VMP1 |
Entrez Gene ID | 455171 |
Full Name | vacuole membrane protein 1 |
Synonyms | TMEM49 |
General protein information |
|
Gene Type | protein-coding |
Organism | Pan troglodytes(chimpanzee) |
ORF » Species Summary » Pan troglodytes » VMP1 cDNA ORF clone
gRNAs
Gene Symbol | VMP1 |
Entrez Gene ID | 455171 |
Full Name | vacuole membrane protein 1 |
Synonyms | TMEM49 |
General protein information |
|
Gene Type | protein-coding |
Organism | Pan troglodytes(chimpanzee) |
mRNA | Protein | Name |
---|---|---|
NM_001242611.1 | NP_001229540.1 | vacuole membrane protein 1 |
XM_024350103.1 | XP_024205871.1 | vacuole membrane protein 1 isoform X1 |
Mus musculus (house mouse) | Vmp1 | NP_083754.2 |
Danio rerio (zebrafish) | vmp1 | NP_996943.1 |
Anopheles gambiae (African malaria mosquito) | AgaP_AGAP010304 | XP_318214.4 |
Caenorhabditis elegans (roundworm) | epg-3 | NP_499688.2 |
Pan troglodytes (chimpanzee) | VMP1 | NP_001229540.1 |
Canis lupus familiaris (dog) | VMP1 | XP_005624806.1 |
Arabidopsis thaliana (thale cress) | AT4G14950 | NP_567450.1 |
Oryza sativa (rice) | Os01g0778700 | NP_001044428.1 |
Homo sapiens (human) | VMP1 | NP_112200.2 |
Gallus gallus (chicken) | VMP1 | XP_004946771.1 |
Drosophila melanogaster (fruit fly) | Tango5 | NP_727446.1 |
Bos taurus (cattle) | VMP1 | NP_001068836.1 |
Rattus norvegicus (Norway rat) | Vmp1 | NP_620194.1 |
Arabidopsis thaliana (thale cress) | AT1G05360 | NP_563735.1 |
Xenopus tropicalis (tropical clawed frog) | vmp1 | NP_001007877.1 |
Major chimpanzee-specific structural changes in sperm development-associated genes.
Kim RN, Kim DW, Choi SH, Chae SH, Nam SH, Kim DW, Kim A, Kang A, Park KH, Lee YS, Hirai M, Suzuki Y, Sugano S, Hashimoto K, Kim DS, Park HS
Functional & integrative genomics11(3)507-17(2011 Sep)
Selection on human genes as revealed by comparisons to chimpanzee cDNA.
Hellmann I, Zollner S, Enard W, Ebersberger I, Nickel B, Paabo S
Genome research13(5)831-7(2003 May)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following VMP1 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the VMP1 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OPc01270 | |
Clone ID Related Accession (Same CDS sequence) | NM_001242611.1 , XM_024350103.1 | |
Accession Version | NM_001242611.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1221bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-06-20 | |
Organism | Pan troglodytes(chimpanzee) | |
Product | vacuole membrane protein 1 | |
Comment | Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from NBAG03000258.1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments to CB297348.1 and human NM_030938.3. ##Evidence-Data-START## Transcript exon combination :: GABE01007108.1, GABF01001689.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN01120800, SAMN01120804 [ECO:0000348] ##Evidence-Data-END## |
1 | ATGGCAGAGA ATGGAAAAAA TTGTGACCAG AGACGTGTAG CAATGAACAA GGAACATCAT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001229540.1 |
CDS | 274..1494 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGGCAGAGA ATGGAAAAAA TTGTGACCAG AGACGTGTAG CAATGAACAA GGAACATCAT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OPc01270 | |
Clone ID Related Accession (Same CDS sequence) | NM_001242611.1 , XM_024350103.1 | |
Accession Version | XM_024350103.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1221bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-03-19 | |
Organism | Pan troglodytes(chimpanzee) | |
Product | vacuole membrane protein 1 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_036896.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Pan troglodytes Annotation Release 105 Annotation Version :: 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGCAGAGA ATGGAAAAAA TTGTGACCAG AGACGTGTAG CAATGAACAA GGAACATCAT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_024205871.1 |
CDS | 102..1322 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGGCAGAGA ATGGAAAAAA TTGTGACCAG AGACGTGTAG CAATGAACAA GGAACATCAT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Major chimpanzee-specific structural changes in sperm development-associated genes. |
Selection on human genes as revealed by comparisons to chimpanzee cDNA. |