Gene Symbol | SPTLC1 |
Entrez Gene ID | 464590 |
Full Name | serine palmitoyltransferase long chain base subunit 1 |
General protein information |
|
Gene Type | protein-coding |
Organism | Pan troglodytes(chimpanzee) |
ORF » Species Summary » Pan troglodytes » SPTLC1 cDNA ORF clone
Gene Symbol | SPTLC1 |
Entrez Gene ID | 464590 |
Full Name | serine palmitoyltransferase long chain base subunit 1 |
General protein information |
|
Gene Type | protein-coding |
Organism | Pan troglodytes(chimpanzee) |
mRNA | Protein | Name |
---|---|---|
NM_001280432.1 | NP_001267361.1 | serine palmitoyltransferase 1 |
XM_024345506.1 | XP_024201274.1 | serine palmitoyltransferase 1 isoform X1 |
Mus musculus (house mouse) | Sptlc1 | NP_033295.2 |
Caenorhabditis elegans (roundworm) | sptl-1 | NP_001021978.1 |
Oryza sativa (rice) | Os10g0189600 | NP_001064272.1 |
Homo sapiens (human) | SPTLC1 | NP_006406.1 |
Pan troglodytes (chimpanzee) | SPTLC1 | XP_520127.4 |
Danio rerio (zebrafish) | sptlc1 | NP_001018307.1 |
Kluyveromyces lactis | KLLA0A09955g | XP_451435.1 |
Magnaporthe oryzae (rice blast fungus) | MGG_00864 | XP_003718108.1 |
Arabidopsis thaliana (thale cress) | LCB1 | NP_001031796.1 |
Oryza sativa (rice) | Os03g0252800 | NP_001049576.1 |
Oryza sativa (rice) | Os02g0806900 | NP_001048451.2 |
Bos taurus (cattle) | SPTLC1 | NP_001029921.1 |
Rattus norvegicus (Norway rat) | Sptlc1 | NP_001101876.1 |
Gallus gallus (chicken) | SPTLC1 | XP_004949309.1 |
Drosophila melanogaster (fruit fly) | Spt-I | NP_610842.1 |
Schizosaccharomyces pombe (fission yeast) | SPBC18E5.02c | NP_595848.1 |
Neurospora crassa | NCU06870 | XP_957979.1 |
Canis lupus familiaris (dog) | SPTLC1 | XP_541308.2 |
Saccharomyces cerevisiae (baker's yeast) | LCB1 | NP_014025.1 |
Anopheles gambiae (African malaria mosquito) | AgaP_AGAP010427 | XP_311520.4 |
Eremothecium gossypii | AGOS_ABR145C | NP_983092.2 |
Xenopus tropicalis (tropical clawed frog) | sptlc1 | NP_001073042.1 |
Major chimpanzee-specific structural changes in sperm development-associated genes.
Kim RN, Kim DW, Choi SH, Chae SH, Nam SH, Kim DW, Kim A, Kang A, Park KH, Lee YS, Hirai M, Suzuki Y, Sugano S, Hashimoto K, Kim DS, Park HS
Functional & integrative genomics11(3)507-17(2011 Sep)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following SPTLC1 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the SPTLC1 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OPc00394 | |
Clone ID Related Accession (Same CDS sequence) | NM_001280432.1 | |
Accession Version | NM_001280432.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1422bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-09-20 | |
Organism | Pan troglodytes(chimpanzee) | |
Product | serine palmitoyltransferase 1 | |
Comment | Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from AK305062.1. On Jul 22, 2013 this sequence version replaced XM_520127.4. ##Evidence-Data-START## Transcript exon combination :: AK305062.1 [ECO:0000332] RNAseq introns :: mixed/partial sample support SAMN01120800, SAMN01120804 [ECO:0000350] ##Evidence-Data-END## |
1 | ATGGCGACCG CCACGGAGCA GTGGGTTCTG GTGGAGATGG TACAGGCGCT TTACGAGGCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001267361.1 |
CDS | 37..1458 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001280432.1 |
1 | ATGGCGACCG CCACGGAGCA GTGGGTTCTG GTGGAGATGG TACAGGCGCT TTACGAGGCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OPc109142 | |
Clone ID Related Accession (Same CDS sequence) | XM_024345506.1 | |
Accession Version | XM_024345506.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1542bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-03-19 | |
Organism | Pan troglodytes(chimpanzee) | |
Product | serine palmitoyltransferase 1 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_036888.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Pan troglodytes Annotation Release 105 Annotation Version :: 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGCGACCG CCACGGAGCA GTGGGTTCTG GTGGAGATGG TACAGGCGCT TTACGAGGCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_024201274.1 |
CDS | 100..1641 |
Translation |
Target ORF information:
Target ORF information:
|
XM_024345506.1 |
1 | ATGGCGACCG CCACGGAGCA GTGGGTTCTG GTGGAGATGG TACAGGCGCT TTACGAGGCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Major chimpanzee-specific structural changes in sperm development-associated genes. |