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PF3D7_1409900 cDNA ORF clone, Plasmodium falciparum 3D7

Summary

Gene Symbol PF3D7_1409900
Entrez Gene ID 811678
Full Name cytidine diphosphate-diacylglycerol synthase
Gene Type protein-coding
Organism Plasmodium falciparum 3D7

Reference Sequences (RefSeq)

mRNA and Protein(s)

mRNA Protein Name
XM_001348234.1 XP_001348270.1 cytidine diphosphate-diacylglycerol synthase

Pathways from BioSystems


Gene Ontology


Bibliography

Related articles in PubMed

Genome sequence of the human malaria parasite Plasmodium falciparum.
Gardner MJ, Hall N, Fung E, White O, Berriman M, Hyman RW, Carlton JM, Pain A, Nelson KE, Bowman S, Paulsen IT, James K, Eisen JA, Rutherford K, Salzberg SL, Craig A, Kyes S, Chan MS, Nene V, Shallom SJ, Suh B, Peterson J, Angiuoli S, Pertea M, Allen J, Selengut J, Haft D, Mather MW, Vaidya AB, Martin DM, Fairlamb AH, Fraunholz MJ, Roos DS, Ralph SA, McFadden GI, Cummings LM, Subramanian GM, Mungall C, Venter JC, Carucci DJ, Hoffman SL, Newbold C, Davis RW, Fraser CM, Barrell B
Nature419(6906)498-511(2002 Oct)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The N-terminal of CDS is a peripheral membrane protein and is trafficked outside the parasite to the parasitophorous vacuole.
Title: Plasmodium CDP-DAG synthase: an atypical gene with an essential N-terminal extension.

The following PF3D7_1409900 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the PF3D7_1409900 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OPr01466 XM_001348234.1
Latest version!		 Plasmodium falciparum 3D7 cytidine diphosphate-diacylglycerol synthase (PF3D7_1409900), partial mRNA. pcDNA3.1-C-(k)DYK or customized vector TBD $426.30
$609.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)


CloneID OPr01466
Clone ID Related Accession (Same CDS sequence) XM_001348234.1
Accession Version XM_001348234.1 Latest version! Documents for ORF clone product in default vector
Sequence Information ORF Nucleotide Sequence (Length: 2004bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ™ Seamless cloning technology
Insert Structure linear
Update Date 2018-03-27
Organism Plasmodium falciparum 3D7
Product cytidine diphosphate-diacylglycerol synthase
Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_037283). COMPLETENESS: incomplete on both ends. 

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
1441
1501
1561
1621
1681
1741
1801
1861
1921
1981
ATGCCCAGAA AAAATTCAAA AACAATGACA AATAAATGCG CAAATAGTAA CTCTAACGAT 
TTTATTGAAG ATAAGGTTCT TGATGATAAA AAGAGAAAGA AGAGTACTGA GAGCTCAACC 
GTTGACGAAA AGGGGGATAT AATAAAAAGA AGAAGTAAAA GTAAAAGTTT AGATGATAGT 
AATGGAGGTA TAGAAAATAT GGATAAAGTA AAAGTTTCTA ATAATAATAG AAAGAAAAAA 
AGCGAAACTA TGATTAATAA TGATAATAAT AATGATAATG ATGATATTAA GAGTATGAAC 
CATATGAACA GTATGACCCA TACGAACAGT ACTAACCATA CTAATAATAT GGACAATATG 
GACAATATGG ACAATGTGAA CAATATGGAC GATGTGAACA ATATGAACAA TGTGAACAAT 
ATGAAGAATA ATATAAACGA TGAAGTATAT AAATTAGGTA GTTTTGAATA TGAAGAAGAA 
TGTAAAAAGA GAAATATAAG AAATTCAGAA TGTAAAAGGA GGAGGAATTT AAAAGATATG 
AAATATTTTA AAGACATAAA ACCATTAAAA GATTTTGTAA ATTTAAAAAA TAGCAACAAT 
AATAATAATA CGAATCAACA TAATAGTGGT ATCTTTTCTA ATTTCACCAG ATTTTATGGT 
TATAATAATA AAAACAGTTT TAATTCTAAT CGATCTAAAC AAAGTACATG TAGTAATAGT 
AATTTACAAA ATAATATGAA CCTAGTAAAT TCTGAAAGTT TTGAATCAAA ATTACAAACA 
TTTAAAGTAC GATCACAATG GACATTTATA TTAATCTTAT TATATTTTAT AATATTAGCA 
GCTGGGCATT TTTATTGTTC CATATTAGTA TTAATATTAG TAACAACATT ATATAAGGAG 
ATTATATCAT TAAAAAGTAT AGAAAATAAG GATAAAAAAT TACCAGAAAT ATTTTATATT 
AGATGGTATT GGTTTTTTTT AACTATTATG ACATTAGGTA TACCGTGGGT TATACCAAAA 
TTAAAACATC AAATACCTTT ATATAAATTT CTATTAACAT ATCATTCTAT AAATATGTTT 
ATATTAGCAT TTGTTGGATT TGTATGGTTT ATATTATCAT TAAGAAAATT CTCATTAAAA 
TACCAGTTCT CACAAATAGG TATAATATTA TTATCCTCCT TATTTATTGT AACACAATCC 
TTAATGCATA TTGCAAATAT TTATTCTGGT ATGATATGGT TTATCGTACC AGTATCATCA 
GTTGTTATAA ATGACATTTT TGCTTATGTA TTTGGTATTT TATTTGGTAA GACCAGATTA 
ATTCAATTAT CCCCCAAAAA AACTGTAGAA GGCTATGTAG GTTCCTCTAT TATTACTATA 
GTATGGGGTA TTTTAATAAC ATACTTTTTA CAAAGATATA AATTTTTTAT CTGTCCACAA 
AAATATATAA CATTCCAACC ATTTGTATCT TGGAATTATA TTGATTGTGA TATTAATCCT 
ATATTCCAAC AAAAAGTTTA TGAAGTACCG AAACAAATCT CTCAAATCTT ATCCATCAAA 
AATATTTATT ATAGTAAAAT GATTTTTCAT GGACTCATGC TAAGCCTCTT TGCTGCATTC 
TTAGCACCCT TCGGGGGCTT TTTTGCATCC GGTTTTAAAA GAGCACTCAA AATTAAAGAT 
TTTGGAAAAT CCATACCAGG TCATGGAGGT GTTACAGATA GATTTGATTG TCAAATTTTT 
ATTGGAATGT TTACATATAT TTATATGAAA ACTTTTGTTA AAATCAAAGG AGGTATTTAT 
TCATATGATC TAATTATTGA ATCTATACAA AAATTAGATC ATAAGGAAAT AATCAGGTTA 
TTTAATCAAC TCAAAAATAT CGTAGACAAA AAAAGAAGAA AACAATGCAC AGATAATAAT 
ACAAATGATA TACACACACG AAAGGACAAA AGGTCAAATA TAGATAAACC TTGTACGGAC 
AAAAATAAAA TTCCAAACAA ATGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq XP_001348270.1
CDS1..2004
Translation

Target ORF information:

RefSeq Version XM_001348234.1
Organism Plasmodium falciparum 3D7
Definition Plasmodium falciparum 3D7 cytidine diphosphate-diacylglycerol synthase (PF3D7_1409900), partial mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
 XM_001348234.1

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
1441
1501
1561
1621
1681
1741
1801
1861
1921
1981
ATGCCCAGAA AAAATTCAAA AACAATGACA AATAAATGCG CAAATAGTAA CTCTAACGAT 
TTTATTGAAG ATAAGGTTCT TGATGATAAA AAGAGAAAGA AGAGTACTGA GAGCTCAACC 
GTTGACGAAA AGGGGGATAT AATAAAAAGA AGAAGTAAAA GTAAAAGTTT AGATGATAGT 
AATGGAGGTA TAGAAAATAT GGATAAAGTA AAAGTTTCTA ATAATAATAG AAAGAAAAAA 
AGCGAAACTA TGATTAATAA TGATAATAAT AATGATAATG ATGATATTAA GAGTATGAAC 
CATATGAACA GTATGACCCA TACGAACAGT ACTAACCATA CTAATAATAT GGACAATATG 
GACAATATGG ACAATGTGAA CAATATGGAC GATGTGAACA ATATGAACAA TGTGAACAAT 
ATGAAGAATA ATATAAACGA TGAAGTATAT AAATTAGGTA GTTTTGAATA TGAAGAAGAA 
TGTAAAAAGA GAAATATAAG AAATTCAGAA TGTAAAAGGA GGAGGAATTT AAAAGATATG 
AAATATTTTA AAGACATAAA ACCATTAAAA GATTTTGTAA ATTTAAAAAA TAGCAACAAT 
AATAATAATA CGAATCAACA TAATAGTGGT ATCTTTTCTA ATTTCACCAG ATTTTATGGT 
TATAATAATA AAAACAGTTT TAATTCTAAT CGATCTAAAC AAAGTACATG TAGTAATAGT 
AATTTACAAA ATAATATGAA CCTAGTAAAT TCTGAAAGTT TTGAATCAAA ATTACAAACA 
TTTAAAGTAC GATCACAATG GACATTTATA TTAATCTTAT TATATTTTAT AATATTAGCA 
GCTGGGCATT TTTATTGTTC CATATTAGTA TTAATATTAG TAACAACATT ATATAAGGAG 
ATTATATCAT TAAAAAGTAT AGAAAATAAG GATAAAAAAT TACCAGAAAT ATTTTATATT 
AGATGGTATT GGTTTTTTTT AACTATTATG ACATTAGGTA TACCGTGGGT TATACCAAAA 
TTAAAACATC AAATACCTTT ATATAAATTT CTATTAACAT ATCATTCTAT AAATATGTTT 
ATATTAGCAT TTGTTGGATT TGTATGGTTT ATATTATCAT TAAGAAAATT CTCATTAAAA 
TACCAGTTCT CACAAATAGG TATAATATTA TTATCCTCCT TATTTATTGT AACACAATCC 
TTAATGCATA TTGCAAATAT TTATTCTGGT ATGATATGGT TTATCGTACC AGTATCATCA 
GTTGTTATAA ATGACATTTT TGCTTATGTA TTTGGTATTT TATTTGGTAA GACCAGATTA 
ATTCAATTAT CCCCCAAAAA AACTGTAGAA GGCTATGTAG GTTCCTCTAT TATTACTATA 
GTATGGGGTA TTTTAATAAC ATACTTTTTA CAAAGATATA AATTTTTTAT CTGTCCACAA 
AAATATATAA CATTCCAACC ATTTGTATCT TGGAATTATA TTGATTGTGA TATTAATCCT 
ATATTCCAAC AAAAAGTTTA TGAAGTACCG AAACAAATCT CTCAAATCTT ATCCATCAAA 
AATATTTATT ATAGTAAAAT GATTTTTCAT GGACTCATGC TAAGCCTCTT TGCTGCATTC 
TTAGCACCCT TCGGGGGCTT TTTTGCATCC GGTTTTAAAA GAGCACTCAA AATTAAAGAT 
TTTGGAAAAT CCATACCAGG TCATGGAGGT GTTACAGATA GATTTGATTG TCAAATTTTT 
ATTGGAATGT TTACATATAT TTATATGAAA ACTTTTGTTA AAATCAAAGG AGGTATTTAT 
TCATATGATC TAATTATTGA ATCTATACAA AAATTAGATC ATAAGGAAAT AATCAGGTTA 
TTTAATCAAC TCAAAAATAT CGTAGACAAA AAAAGAAGAA AACAATGCAC AGATAATAAT 
ACAAATGATA TACACACACG AAAGGACAAA AGGTCAAATA TAGATAAACC TTGTACGGAC 
AAAAATAAAA TTCCAAACAA ATGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

PubMed

book

Genome sequence of the human malaria parasite Plasmodium falciparum.
Nature419(6906)498-511(2002 Oct)
Gardner MJ,Hall N,Fung E,White O,Berriman M,Hyman RW,Carlton JM,Pain A,Nelson KE,Bowman S,Paulsen IT,James K,Eisen JA,Rutherford K,Salzberg SL,Craig A,Kyes S,Chan MS,Nene V,Shallom SJ,Suh B,Peterson J,Angiuoli S,Pertea M,Allen J,Selengut J,Haft D,Mather MW,Vaidya AB,Martin DM,Fairlamb AH,Fraunholz MJ,Roos DS,Ralph SA,McFadden GI,Cummings LM,Subramanian GM,Mungall C,Venter JC,Carucci DJ,Hoffman SL,Newbold C,Davis RW,Fraser CM,Barrell B