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Pou4f1 cDNA ORF clone, Rattus norvegicus(Norway rat)

Summary

Gene Symbol Pou4f1
Entrez Gene ID 114503
Full Name POU class 4 homeobox 1
Synonyms Brn3a,brn-3A
General protein information
Preferred Names

POU class 4 homeobox 1

Names

POU domain, class 4, transcription factor 1
LOW QUALITY PROTEIN: POU domain, class 4, transcription factor 1
brain-3A
brain-specific homeobox/POU domain protein 3A
Gene Type protein-coding
Organism Rattus norvegicus(Norway rat)
Genome

15

15q22

Reference Sequences (RefSeq)

mRNA and Protein(s)

mRNA Protein Name
XM_008770931.2 XP_008769153.1 LOW QUALITY PROTEIN: POU domain, class 4, transcription factor 1 isoform X1
XM_006222050.3 XP_006222112.1 POU domain, class 4, transcription factor 1 isoform X2

Pathways from BioSystems


Homologies


Danio rerio (zebrafish) pou4f1 NP_958442.1
Mus musculus (house mouse) Pou4f1 NP_035273.3
Homo sapiens (human) POU4F1 NP_006228.3
Pan troglodytes (chimpanzee) POU4F1 XP_003314220.1
Rattus norvegicus (Norway rat) Pou4f1 XP_006252496.1
Xenopus tropicalis (tropical clawed frog) LOC100488759 XP_002931972.1

Gene Ontology

The following Pou4f1 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the Pou4f1 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
ORa20280 XM_006222050.3
Latest version!		 Rattus norvegicus POU class 4 homeobox 1 (Pou4f1), transcript variant X2, mRNA. pcDNA3.1+/C-(K)DYK or customized vector TBD $223.30
$319.00
ORa43935 XM_008770931.2
Latest version!		 Rattus norvegicus POU class 4 homeobox 1 (Pou4f1), transcript variant X1, mRNA. pcDNA3.1+/C-(K)DYK or customized vector TBD Quote Price

ORF Online Only Promotion

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*Business Day

** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)


CloneID ORa20280
Clone ID Related Accession (Same CDS sequence) XM_006222050.3
Accession Version XM_006222050.3 Latest version! Documents for ORF clone product in default vector
Sequence Information ORF Nucleotide Sequence (Length: 1026bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ™ Seamless cloning technology
Insert Structure linear
Update Date 2016-07-25
Organism Rattus norvegicus(Norway rat)
Product POU domain, class 4, transcription factor 1 isoform X2
Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (AC_000083.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Jul 26, 2016 this sequence version replaced XM_006222050.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
ATGATGTCCA TGAACAGCAA GCAGCCTCAC TTTGCCATGC ATCCCACCCT CCCTGAGCAC 
AAGTACCCGT CGCTGCACTC CAGCTCCGAG GCCATCCGGC GGGCCTGCCT GCCCACGCCG 
CCGCTGCAGA GCAACCTCTT CGCTAGCCTG GACGAGACGC TCCTGGCGCG GGCCGAGGCG 
CTGGCGGCCG TGGACATCGC GGTGTCCCAG GGCAAGAGCC ACCCTTTCAA GCCGGACGCC 
ACGTACCACA CGATGAATAG CGTGCCCTGC ACGTCCACGT CCACTGTGCC GCTGGCGCAC 
CACCACCACC ACCACCATCA CCACCAGGCG CTCGAGCCCG GTGACCTGCT GGACCACATC 
TCGTCGCCGT CGCTCGCGCT CATGGCCGGC GCGGGGGGTG CGGGCGCGCC GCATCCCGGG 
CTCGTGGCCG CGGCGGCGCA CCACGGCGCG GCGGCGGCAG CGGCGGCGGC GGCGGCCGGG 
CAGGTGGCAG CGGCGTCGGC GGCGGCTGCG GTGGTGGGCG CGGCGGGCCT GGCGTCCATC 
TGCGACTCGG ACACGGACCC GCGCGAGCTC GAGGCGTTCG CCGAGCGCTT CAAGCAGCGG 
CGCATCAAGC TGGGCGTGAC GCAGGCCGAC GTGGGCTCGG CGCTGGCCAA CCTCAAGATC 
CCGGGCGTGG GCTCGCTCAG CCAGAGCACC ATCTGCAGGT TCGAGTCGCT CACGTTGTCG 
CACAACAACA TGATCGCGCT CAAGCCCATC CTGCAGGCGT GGCTGGAGGA GGCCGAGGGC 
GCGCAGCGTG AGAAAATGAA CAAGCCGGAG CTCTTCAACG GCGGCGAGAA GAAGCGCAAG 
CGGACTTCCA TCGCCGCGCC CGAGAAGCGC TCCCTCGAGG CCTATTTTGC CGTACAACCC 
CGGCCCTCCT CGGAGAAGAT CGCCGCCATC GCCGAGAAAC TGGACCTCAA AAAGAACGTG 
GTGCGGGTGT GGTTTTGCAA CCAGAGACAG AAGCAGAAGC GGATGAAATT CTCTGCCACT 
TACTGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq XP_006222112.1
CDS48..1073
Translation

Target ORF information:

RefSeq Version XM_006222050.3
Organism Rattus norvegicus(Norway rat)
Definition Rattus norvegicus POU class 4 homeobox 1 (Pou4f1), transcript variant X2, mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
 XM_006222050.3

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
ATGATGTCCA TGAACAGCAA GCAGCCTCAC TTTGCCATGC ATCCCACCCT CCCTGAGCAC 
AAGTACCCGT CGCTGCACTC CAGCTCCGAG GCCATCCGGC GGGCCTGCCT GCCCACGCCG 
CCGCTGCAGA GCAACCTCTT CGCTAGCCTG GACGAGACGC TCCTGGCGCG GGCCGAGGCG 
CTGGCGGCCG TGGACATCGC GGTGTCCCAG GGCAAGAGCC ACCCTTTCAA GCCGGACGCC 
ACGTACCACA CGATGAATAG CGTGCCCTGC ACGTCCACGT CCACTGTGCC GCTGGCGCAC 
CACCACCACC ACCACCATCA CCACCAGGCG CTCGAGCCCG GTGACCTGCT GGACCACATC 
TCGTCGCCGT CGCTCGCGCT CATGGCCGGC GCGGGGGGTG CGGGCGCGCC GCATCCCGGG 
CTCGTGGCCG CGGCGGCGCA CCACGGCGCG GCGGCGGCAG CGGCGGCGGC GGCGGCCGGG 
CAGGTGGCAG CGGCGTCGGC GGCGGCTGCG GTGGTGGGCG CGGCGGGCCT GGCGTCCATC 
TGCGACTCGG ACACGGACCC GCGCGAGCTC GAGGCGTTCG CCGAGCGCTT CAAGCAGCGG 
CGCATCAAGC TGGGCGTGAC GCAGGCCGAC GTGGGCTCGG CGCTGGCCAA CCTCAAGATC 
CCGGGCGTGG GCTCGCTCAG CCAGAGCACC ATCTGCAGGT TCGAGTCGCT CACGTTGTCG 
CACAACAACA TGATCGCGCT CAAGCCCATC CTGCAGGCGT GGCTGGAGGA GGCCGAGGGC 
GCGCAGCGTG AGAAAATGAA CAAGCCGGAG CTCTTCAACG GCGGCGAGAA GAAGCGCAAG 
CGGACTTCCA TCGCCGCGCC CGAGAAGCGC TCCCTCGAGG CCTATTTTGC CGTACAACCC 
CGGCCCTCCT CGGAGAAGAT CGCCGCCATC GCCGAGAAAC TGGACCTCAA AAAGAACGTG 
GTGCGGGTGT GGTTTTGCAA CCAGAGACAG AAGCAGAAGC GGATGAAATT CTCTGCCACT 
TACTGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

CloneID ORa43935
Clone ID Related Accession (Same CDS sequence) XM_008770931.2
Accession Version XM_008770931.2 Latest version! Documents for ORF clone product in default vector
Sequence Information ORF Nucleotide Sequence (Length: 1263bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ™ Seamless cloning technology
Insert Structure linear
Update Date 2016-07-25
Organism Rattus norvegicus(Norway rat)
Product LOW QUALITY PROTEIN: POU domain, class 4, transcription factor 1 isoform X1
Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005114.4) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Jul 26, 2016 this sequence version replaced XM_008770931.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## ##RefSeq-Attributes-START## frameshifts :: corrected 3 indels ##RefSeq-Attributes-END## 

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
ATGATGTCCA TGAACAGCAA GCAGCCTCAC TTTGCCATGC ATCCCACCCT CCCTGAGCAC 
AAGTACCCGT CGCTGCACTC CAGCTCCGAG GCCATCCGGC GGGCCTGCCT GCCCACGCCG 
CCGCTGCAGA GCAACCTCTT CGCTAGCCTG GACGAGACGC TCCTGGCGCG GGCCGAGGCG 
CTGGCGGCCG TGGACATCGC GGTGTCCCAG GGCAAGAGCC ACCCTTTCAA GCCGGACGCC 
ACGTACCACA CGATGAATAG CGTGCCCTGC ACGTCCACGT CCACTGTGCC GCTGGCGCAC 
CACCACCACC ACCACCATCA CCACCAGGCG CTCGAGCCCG GTGACCTGCT GGACCACATC 
TCGTCGCCGT CGCTCGCGCT CATGGCCGGC GCGGGGGGTG CGGGCGCGGC GGGCGGCGGC 
GGCGCGCCCA CGCGGCCCCG GGGCGCAGGC GGCCCGGGGG GCGGCGGTGG CCCGGGCGGC 
GGCGGCCCCG GGGTGGCGGG GCGGCGGCGT GGCCCGGGCG GCGGCGGCGG CGGCCCGGGC 
GGCGGGCTCT TGGGCNGCTC GGCGCATCCG CACCCGCACA TGCACGGCNC TGGCCACCTG 
TCGCACCCCG CGGCCGCGGC CGCCATGAAC ATGCCGTCCG GGCTGCCGCA TCCCGGGCTC 
GTGGCCGCGG CGGCGCACCA CGGCGCGGCG GCGGCAGCGG CGGCGGCGGC GGCCGGGCAG 
GTGGCAGCGG CGTCGGCGGC GGCTGCGGTG GTGGGCGCGG CGGGCCTGGC GTCCATCTGC 
GACTCGGACA CGGACCCGCG CGAGCTCGAG GCGTTCGCCG AGCGCTTCAA GCAGCGGCGC 
ATCAAGCTGG GCGTGACGCA GGCCGACGTG GGCTCGGCGC TGGCCAACCT CAAGATCCCG 
GGCGTGGGCT CGCTCAGCCA GAGCACCATC TGCAGGTTCG AGTCGCTCAC GTTGTCGCAC 
AACAACATGA TCGCGCTCAA GCCCATCCTG CAGGCGTGGC TGGAGGAGGC CGAGGGCGCG 
CAGCGTGAGA AAATGAACAA GCCGGAGCTC TTCAACGGCG GCGAGAAGAA GCGCAAGCGG 
ACTTCCATCG CCGCGCCCGA GAAGCGCTCC CTCGAGGCCT ATTTTGCCGT ACAACCCCGG 
CCCTCCTCGG AGAAGATCGC CGCCATCGCC GAGAAACTGG ACCTCAAAAA GAACGTGGTG 
CGGGTGTGGT TTTGCAACCA GAGACAGAAG CAGAAGCGGA TGAAATTCTC TGCCACTTAC 
TGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq XP_008769153.1
CDS300..1562
Translation

Target ORF information:

RefSeq Version XM_008770931.2
Organism Rattus norvegicus(Norway rat)
Definition Rattus norvegicus POU class 4 homeobox 1 (Pou4f1), transcript variant X1, mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
 XM_008770931.2

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
ATGATGTCCA TGAACAGCAA GCAGCCTCAC TTTGCCATGC ATCCCACCCT CCCTGAGCAC 
AAGTACCCGT CGCTGCACTC CAGCTCCGAG GCCATCCGGC GGGCCTGCCT GCCCACGCCG 
CCGCTGCAGA GCAACCTCTT CGCTAGCCTG GACGAGACGC TCCTGGCGCG GGCCGAGGCG 
CTGGCGGCCG TGGACATCGC GGTGTCCCAG GGCAAGAGCC ACCCTTTCAA GCCGGACGCC 
ACGTACCACA CGATGAATAG CGTGCCCTGC ACGTCCACGT CCACTGTGCC GCTGGCGCAC 
CACCACCACC ACCACCATCA CCACCAGGCG CTCGAGCCCG GTGACCTGCT GGACCACATC 
TCGTCGCCGT CGCTCGCGCT CATGGCCGGC GCGGGGGGTG CGGGCGCGGC GGGCGGCGGC 
GGCGCGCCCA CGCGGCCCCG GGGCGCAGGC GGCCCGGGGG GCGGCGGTGG CCCGGGCGGC 
GGCGGCCCCG GGGTGGCGGG GCGGCGGCGT GGCCCGGGCG GCGGCGGCGG CGGCCCGGGC 
GGCGGGCTCT TGGGCNGCTC GGCGCATCCG CACCCGCACA TGCACGGCNC TGGCCACCTG 
TCGCACCCCG CGGCCGCGGC CGCCATGAAC ATGCCGTCCG GGCTGCCGCA TCCCGGGCTC 
GTGGCCGCGG CGGCGCACCA CGGCGCGGCG GCGGCAGCGG CGGCGGCGGC GGCCGGGCAG 
GTGGCAGCGG CGTCGGCGGC GGCTGCGGTG GTGGGCGCGG CGGGCCTGGC GTCCATCTGC 
GACTCGGACA CGGACCCGCG CGAGCTCGAG GCGTTCGCCG AGCGCTTCAA GCAGCGGCGC 
ATCAAGCTGG GCGTGACGCA GGCCGACGTG GGCTCGGCGC TGGCCAACCT CAAGATCCCG 
GGCGTGGGCT CGCTCAGCCA GAGCACCATC TGCAGGTTCG AGTCGCTCAC GTTGTCGCAC 
AACAACATGA TCGCGCTCAA GCCCATCCTG CAGGCGTGGC TGGAGGAGGC CGAGGGCGCG 
CAGCGTGAGA AAATGAACAA GCCGGAGCTC TTCAACGGCG GCGAGAAGAA GCGCAAGCGG 
ACTTCCATCG CCGCGCCCGA GAAGCGCTCC CTCGAGGCCT ATTTTGCCGT ACAACCCCGG 
CCCTCCTCGG AGAAGATCGC CGCCATCGCC GAGAAACTGG ACCTCAAAAA GAACGTGGTG 
CGGGTGTGGT TTTGCAACCA GAGACAGAAG CAGAAGCGGA TGAAATTCTC TGCCACTTAC 
TGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

PubMed