Gene Symbol | Ddx39b |
Entrez Gene ID | 114612 |
Full Name | DExD-box helicase 39B |
Synonyms | Bat1,Bat1a,p47 |
General protein information |
|
Gene Type | protein-coding |
Organism | Rattus norvegicus(Norway rat) |
Genome |
ORF » Species Summary » Rattus norvegicus » Ddx39b cDNA ORF clone
Gene Symbol | Ddx39b |
Entrez Gene ID | 114612 |
Full Name | DExD-box helicase 39B |
Synonyms | Bat1,Bat1a,p47 |
General protein information |
|
Gene Type | protein-coding |
Organism | Rattus norvegicus(Norway rat) |
Genome |
mRNA | Protein | Name |
---|---|---|
NM_133300.3 | NP_579834.2 | spliceosome RNA helicase Ddx39b |
Rattus norvegicus (Norway rat) | Ddx39b | NP_579834.2 |
Danio rerio (zebrafish) | bat1 | NP_957237.1 |
Anopheles gambiae (African malaria mosquito) | AgaP_AGAP009075 | XP_319825.4 |
Oryza sativa (rice) | Os01g0550000 | NP_001043298.1 |
Homo sapiens (human) | DDX39B | NP_004631.1 |
Canis lupus familiaris (dog) | DDX39B | NP_001014399.1 |
Pan troglodytes (chimpanzee) | DDX39B | NP_001107635.1 |
DDX39B | NP_001040608.1 | |
Kluyveromyces lactis | KLLA0E21935g | XP_454944.1 |
Arabidopsis thaliana (thale cress) | AT5G11170 | NP_568244.2 |
Xenopus tropicalis (tropical clawed frog) | ddx39b | NP_989072.1 |
Bos taurus (cattle) | DDX39B | NP_001028801.1 |
Mus musculus (house mouse) | Ddx39b | NP_001239386.1 |
Drosophila melanogaster (fruit fly) | Hel25E | NP_723089.1 |
Schizosaccharomyces pombe (fission yeast) | uap56 | NP_594261.1 |
Magnaporthe oryzae (rice blast fungus) | MGG_02806 | XP_003720935.1 |
Neurospora crassa | NCU09076 | XP_964893.2 |
Saccharomyces cerevisiae (baker's yeast) | SUB2 | NP_010199.1 |
Eremothecium gossypii | AGOS_ADR260C | NP_984356.1 |
Oryza sativa (rice) | Os01g0549700 | NP_001043297.1 |
Formation of nuclear bodies by the lncRNA Gomafu-associating proteins Celf3 and SF1.
Ishizuka A, Hasegawa Y, Ishida K, Yanaka K, Nakagawa S
Genes to cells : devoted to molecular & cellular mechanisms19(9)704-21(2014 Sep)
Functions of the DExD/H-box proteins in nuclear pre-mRNA splicing.
Chang TH, Tung L, Yeh FL, Chen JH, Chang SL
Biochimica et biophysica acta1829(8)764-74(2013 Aug)
UAP56 is an important mediator of angiotensin II/platelet derived growth factor induced vascular smooth muscle cell DNA synthesis and proliferation.
Sahni A, Wang N, Alexis J
Biochemical and biophysical research communications431(3)636-40(2013 Feb)
Insights into RNA biology from an atlas of mammalian mRNA-binding proteins.
Castello A, Fischer B, Eichelbaum K, Horos R, Beckmann BM, Strein C, Davey NE, Humphreys DT, Preiss T, Steinmetz LM, Krijgsveld J, Hentze MW
Cell149(6)1393-406(2012 Jun)
The mRNA-bound proteome and its global occupancy profile on protein-coding transcripts.
Baltz AG, Munschauer M, Schwanh?usser B, Vasile A, Murakawa Y, Schueler M, Youngs N, Penfold-Brown D, Drew K, Milek M, Wyler E, Bonneau R, Selbach M, Dieterich C, Landthaler M
Molecular cell46(5)674-90(2012 Jun)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
These findings suggest that UAP56 is a regulator of VSMC proliferation and identify UAP56 as a target for preventing vascular proliferative disease.
Title: UAP56 is an important mediator of angiotensin II/platelet derived growth factor induced vascular smooth muscle cell DNA synthesis and proliferation.
To determine whether the rat possesses an H2-D orthologue, we sequenced a cosmid clone that contains rat Bat1 and an adjacent class I gene, RT1.46 (l).
Title: Does the rat have an H2-D orthologue next to Bat1?
The following Ddx39b gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the Ddx39b cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | ORa12143 | |
Clone ID Related Accession (Same CDS sequence) | NM_133300.3 | |
Accession Version | NM_133300.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1287bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-10-18 | |
Organism | Rattus norvegicus(Norway rat) | |
Product | spliceosome RNA helicase Ddx39b | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from DY309526.1 and BC080243.1. On Oct 2, 2009 this sequence version replaced NM_133300.2. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications. ##Evidence-Data-START## Transcript exon combination :: FQ212901.1, BC080243.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN01906347 [ECO:0000348] ##Evidence-Data-END## |
1 | ATGGCAGAGA ACGATGTGGA CAATGAGCTC TTGGACTATG AAGACGATGA GGTGGAGACG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_579834.2 |
CDS | 195..1481 |
Translation |
Target ORF information:
Target ORF information:
|
NM_133300.3 |
1 | ATGGCAGAGA ACGATGTGGA CAATGAGCTC TTGGACTATG AAGACGATGA GGTGGAGACG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Formation of nuclear bodies by the lncRNA Gomafu-associating proteins Celf3 and SF1. |
Functions of the DExD/H-box proteins in nuclear pre-mRNA splicing. |
UAP56 is an important mediator of angiotensin II/platelet derived growth factor induced vascular smooth muscle cell DNA synthesis and proliferation. |
Insights into RNA biology from an atlas of mammalian mRNA-binding proteins. |
The mRNA-bound proteome and its global occupancy profile on protein-coding transcripts. |