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Plbd2 cDNA ORF clone, Rattus norvegicus(Norway rat)

Summary

Gene Symbol Plbd2
Entrez Gene ID 246120
Full Name phospholipase B domain containing 2
Synonyms P76
General protein information
Preferred Names

phospholipase B domain containing 2

Names

putative phospholipase B-like 2
LAMA-like protein 2
RDCR-0918-3 protein
lamina ancestor homolog 2
mannose-6-phosphate protein p76
phospholipase B domain-containing protein 2
Gene Type protein-coding
Organism Rattus norvegicus(Norway rat)
Genome

12

12q16
Summary human homolog is a nucleolar RNA-binding protein [RGD, Feb 2006].

Reference Sequences (RefSeq)

mRNA and Protein(s)

mRNA Protein Name
NM_139255.3 NP_640348.2 putative phospholipase B-like 2 precursor
XM_017598258.1 XP_017453747.1 putative phospholipase B-like 2 isoform X1

Pathways from BioSystems


Homologies


Pan troglodytes (chimpanzee) PLBD2 XP_509397.3
PLBD2 XP_001104551.2
Rattus norvegicus (Norway rat) Plbd2 NP_640348.2
Caenorhabditis elegans (roundworm) Y37D8A.2 NP_499668.1
Xenopus tropicalis (tropical clawed frog) plbd2 XP_002939239.1
Homo sapiens (human) PLBD2 NP_775813.2
Bos taurus (cattle) PLBD2 NP_001039635.1
Mus musculus (house mouse) Plbd2 NP_076114.2
Canis lupus familiaris (dog) PLBD2 XP_005636570.1
Gallus gallus (chicken) PLBD2 XP_003642281.1

Gene Ontology


Bibliography

Related articles in PubMed

Biochemical characterization and lysosomal localization of the mannose-6-phosphate protein p76 (hypothetical protein LOC196463).
Jensen AG, Chemali M, Chapel A, Kieffer-Jaquinod S, Jadot M, Garin J, Journet A
The Biochemical journal402(3)449-58(2007 Mar)

Molecular characterization of the hypothetical 66.3-kDa protein in mouse: lysosomal targeting, glycosylation, processing and tissue distribution.
Deuschl F, Kollmann K, von Figura K, L?bke T
FEBS letters580(24)5747-52(2006 Oct)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following Plbd2 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the Plbd2 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
ORa57780 XM_017598258.1
Latest version!		 Rattus norvegicus phospholipase B domain containing 2 (Plbd2), transcript variant X1, mRNA. pcDNA3.1-C-(k)DYK or customized vector 9-11 $223.30
$319.00
ORa02309 NM_139255.3
Latest version!		 Rattus norvegicus phospholipase B domain containing 2 (Plbd2), mRNA. pcDNA3.1-C-(k)DYK or customized vector TBD $307.30
$439.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)


CloneID ORa57780
Clone ID Related Accession (Same CDS sequence) XM_017598258.1
Accession Version XM_017598258.1 Latest version! Documents for ORF clone product in default vector
Sequence Information ORF Nucleotide Sequence (Length: 1494bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ™ Seamless cloning technology
Insert Structure linear
Update Date 2016-07-25
Organism Rattus norvegicus(Norway rat)
Product putative phospholipase B-like 2 isoform X1
Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005111.4) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
1441
ATGGCTTCTC ACAGGTGGGC CTATCTGGAC CTGGGCACAA ATGGCAGCTA CAATGACAGC 
CTGCAGGCCT ATGCAGCTGG TGTGGTGGAG GCCTCTGTGT CCGAGGAGCT CATCTACATG 
CACTGGATGA ACACGGTGGT CAATTACTGC GGCCCCTTCG AGTACGAAGT CGGCTACTGT 
GAGAAGCTCA AGAGCTTCCT GGAGGCCAAC CTGGAGTGGA TGCAGAGGGA AATGGAGCTT 
AGCCCGGACT CGCCATACTG GCACCAGGTG CGGCTGACCC TCCTGCAGCT GAAAGGCCTG 
GAGGACAGCT ATGAAGGCCG TTTAACCTTC CCAACTGGGA GGTTCAACAT CAAACCCTTG 
GGGTTCCTCC TGCTGCAGAT CTCTGGAGAT CTGGAAGACC TAGAGCCAGC CCTGAATAAG 
ACCAACACCA AGCCTTCCGT GGGCTCCGGT TCGTGCTCTG CCCTCATCAA GCTGCTGCCC 
GGCAGCCATG ATCTCCTGGT GGCTCACAAC ACTTGGAACT CCTACCAGAA CATGTTACGC 
ATCATCAAGA AGTACCGGCT GCAGTTCCGG GAGGGGCCGC AAGAGGAGTA CCCCCTGATT 
GCCGGCAACA ACTTGATTTT TTCGTCTTAC CCGGGCACCA TCTTCTCCGG TGATGACTTC 
TACATCCTGG GCAGTGGGCT GGTCACCCTG GAGACCACCA TCGGCAACAA GAACCCAGCG 
CTGTGGAAGT ACGTGCAACC CCAGGGCTGT GTGCTGGAGT GGATTCGAAA CATTGTGGCC 
AACCGCCTGG CCTTGGATGG GGCCACCTGG GCAGATGTCT TCAGGCGGTT CAATAGTGGC 
ACGTATAATA ACCAGTGGAT GATTGTGGAC TACAAGGCAT TCATCCCCAA TGGGCCCAGC 
CCTGGAAGCC GGGTGCTCAC CATCCTAGAA CAGATCCCGG GCATGGTGGT GGTGGCGGAC 
AAGACTGCAG AGCTCTACAA GACGACCTAC TGGGCTAGCT ACAACATCCC GTACTTTGAG 
AGTGTTTTCA ACGCTAGTGG TCTGCAGGCC CTGGTAGCCC AGTACGGAGA TTGGTTCTCC 
TACACCAGGA ACCCTCGAGC CAAGATCTTC CAGAGGGACC AGTCACTAGT GGAGGACGTA 
GACACCATGG TCCGGCTCAT GAGGTACAAT GACTTCCTTC ATGACCCTCT GTCGTTGTGT 
GAGGCCTGCA GCCCGAAGCC CAACGCAGAG AACGCCATCT CTGCCCGCTC TGATCTCAAC 
CCTGCTAATG GCTCCTACCC ATTTCAGGCC CTGCGTCAGC GCGCCCATGG CGGCATTGAT 
GTGAAGGTGA CCAGCGTTGC ACTGGCTAAG TACATGAGCA TGCTGGCAGC CAGTGGCCCC 
ACGTGGGACC AGTTGCCACC GTTCCAGTGG AGTAAATCAC CATTCCACAA CATGCTGCAC 
ATGGGCCAGC CTGATCTTTG GATGTTCTCA CCTGTCAAGG TCCCATGGGA CTGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq XP_017453747.1
CDS603..2096
Translation

Target ORF information:

RefSeq Version XM_017598258.1
Organism Rattus norvegicus(Norway rat)
Definition Rattus norvegicus phospholipase B domain containing 2 (Plbd2), transcript variant X1, mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
 XM_017598258.1

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
1441
ATGGCTTCTC ACAGGTGGGC CTATCTGGAC CTGGGCACAA ATGGCAGCTA CAATGACAGC 
CTGCAGGCCT ATGCAGCTGG TGTGGTGGAG GCCTCTGTGT CCGAGGAGCT CATCTACATG 
CACTGGATGA ACACGGTGGT CAATTACTGC GGCCCCTTCG AGTACGAAGT CGGCTACTGT 
GAGAAGCTCA AGAGCTTCCT GGAGGCCAAC CTGGAGTGGA TGCAGAGGGA AATGGAGCTT 
AGCCCGGACT CGCCATACTG GCACCAGGTG CGGCTGACCC TCCTGCAGCT GAAAGGCCTG 
GAGGACAGCT ATGAAGGCCG TTTAACCTTC CCAACTGGGA GGTTCAACAT CAAACCCTTG 
GGGTTCCTCC TGCTGCAGAT CTCTGGAGAT CTGGAAGACC TAGAGCCAGC CCTGAATAAG 
ACCAACACCA AGCCTTCCGT GGGCTCCGGT TCGTGCTCTG CCCTCATCAA GCTGCTGCCC 
GGCAGCCATG ATCTCCTGGT GGCTCACAAC ACTTGGAACT CCTACCAGAA CATGTTACGC 
ATCATCAAGA AGTACCGGCT GCAGTTCCGG GAGGGGCCGC AAGAGGAGTA CCCCCTGATT 
GCCGGCAACA ACTTGATTTT TTCGTCTTAC CCGGGCACCA TCTTCTCCGG TGATGACTTC 
TACATCCTGG GCAGTGGGCT GGTCACCCTG GAGACCACCA TCGGCAACAA GAACCCAGCG 
CTGTGGAAGT ACGTGCAACC CCAGGGCTGT GTGCTGGAGT GGATTCGAAA CATTGTGGCC 
AACCGCCTGG CCTTGGATGG GGCCACCTGG GCAGATGTCT TCAGGCGGTT CAATAGTGGC 
ACGTATAATA ACCAGTGGAT GATTGTGGAC TACAAGGCAT TCATCCCCAA TGGGCCCAGC 
CCTGGAAGCC GGGTGCTCAC CATCCTAGAA CAGATCCCGG GCATGGTGGT GGTGGCGGAC 
AAGACTGCAG AGCTCTACAA GACGACCTAC TGGGCTAGCT ACAACATCCC GTACTTTGAG 
AGTGTTTTCA ACGCTAGTGG TCTGCAGGCC CTGGTAGCCC AGTACGGAGA TTGGTTCTCC 
TACACCAGGA ACCCTCGAGC CAAGATCTTC CAGAGGGACC AGTCACTAGT GGAGGACGTA 
GACACCATGG TCCGGCTCAT GAGGTACAAT GACTTCCTTC ATGACCCTCT GTCGTTGTGT 
GAGGCCTGCA GCCCGAAGCC CAACGCAGAG AACGCCATCT CTGCCCGCTC TGATCTCAAC 
CCTGCTAATG GCTCCTACCC ATTTCAGGCC CTGCGTCAGC GCGCCCATGG CGGCATTGAT 
GTGAAGGTGA CCAGCGTTGC ACTGGCTAAG TACATGAGCA TGCTGGCAGC CAGTGGCCCC 
ACGTGGGACC AGTTGCCACC GTTCCAGTGG AGTAAATCAC CATTCCACAA CATGCTGCAC 
ATGGGCCAGC CTGATCTTTG GATGTTCTCA CCTGTCAAGG TCCCATGGGA CTGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

CloneID ORa02309
Clone ID Related Accession (Same CDS sequence) NM_139255.3
Accession Version NM_139255.3 Latest version! Documents for ORF clone product in default vector
Sequence Information ORF Nucleotide Sequence (Length: 1758bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ™ Seamless cloning technology
Insert Structure linear
Update Date 2019-02-19
Organism Rattus norvegicus(Norway rat)
Product putative phospholipase B-like 2 precursor
Comment Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from DN935663.1, DY309487.1 and BC126078.1. On Oct 17, 2007 this sequence version replaced NM_139255.2. ##Evidence-Data-START## RNAseq introns :: single sample supports all introns SAMD00052296, SAMD00052297 [ECO:0000348] ##Evidence-Data-END## 

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
1441
1501
1561
1621
1681
1741
ATGGCGGCCC CCATGGACCG GACCCATGGT GGCCGGGCGG CCCGGGCGCT GCGGCGGGCT 
CTGGCGCTGG CCTCGCTGGC CGGGCTATTG CTGAGCGGCC TGGCGGGTGC TCTCCCCACC 
CTCGGGCCCG GCTGGCGGCG CCAAAACCCC GAGCCGCCGG CCTCCCGCAC CCGCTCGCTG 
CTGCTGGACG CCGCTTCGGG CCAGCTGCGC CTGGAGTACG GCTTCCACCC CGATGCGGTG 
GCCTGGGCTA ACCTCACCAA CGCCATCCGC GAGACTGGGT GGGCCTATCT GGACCTGGGC 
ACAAATGGCA GCTACAATGA CAGCCTGCAG GCCTATGCAG CTGGTGTGGT GGAGGCCTCT 
GTGTCCGAGG AGCTCATCTA CATGCACTGG ATGAACACGG TGGTCAATTA CTGCGGCCCC 
TTCGAGTACG AAGTCGGCTA CTGTGAGAAG CTCAAGAGCT TCCTGGAGGC CAACCTGGAG 
TGGATGCAGA GGGAAATGGA GCTTAGCCCG GACTCGCCAT ACTGGCACCA GGTGCGGCTG 
ACCCTCCTGC AGCTGAAAGG CCTGGAGGAC AGCTATGAAG GCCGTTTAAC CTTCCCAACT 
GGGAGGTTCA ACATCAAACC CTTGGGGTTC CTCCTGCTGC AGATCTCTGG AGATCTGGAA 
GACCTAGAGC CAGCCCTGAA TAAGACCAAC ACCAAGCCTT CCGTGGGCTC CGGTTCGTGC 
TCTGCCCTCA TCAAGCTGCT GCCCGGCAGC CATGATCTCC TGGTGGCTCA CAACACTTGG 
AACTCCTACC AGAACATGTT ACGCATCATC AAGAAGTACC GGCTGCAGTT CCGGGAGGGG 
CCGCAAGAGG AGTACCCCCT GATTGCCGGC AACAACTTGA TTTTTTCGTC TTACCCGGGC 
ACCATCTTCT CCGGTGATGA CTTCTACATC CTGGGCAGTG GGCTGGTCAC CCTGGAGACC 
ACCATCGGCA ACAAGAACCC AGCGCTGTGG AAGTACGTGC AACCCCAGGG CTGTGTGCTG 
GAGTGGATTC GAAACATTGT GGCCAACCGC CTGGCCTTGG ATGGGGCCAC CTGGGCAGAT 
GTCTTCAGGC GGTTCAATAG TGGCACGTAT AATAACCAGT GGATGATTGT GGACTACAAG 
GCATTCATCC CCAATGGGCC CAGCCCTGGA AGCCGGGTGC TCACCATCCT AGAACAGATC 
CCGGGCATGG TGGTGGTGGC GGACAAGACT GCAGAGCTCT ACAAGACGAC CTACTGGGCT 
AGCTACAACA TCCCGTACTT TGAGAGTGTT TTCAACGCTA GTGGTCTGCA GGCCCTGGTA 
GCCCAGTACG GAGATTGGTT CTCCTACACC AGGAACCCTC GAGCCAAGAT CTTCCAGAGG 
GACCAGTCAC TAGTGGAGGA CGTAGACACC ATGGTCCGGC TCATGAGGTA CAATGACTTC 
CTTCATGACC CTCTGTCGTT GTGTGAGGCC TGCAGCCCGA AGCCCAACGC AGAGAACGCC 
ATCTCTGCCC GCTCTGATCT CAACCCTGCT AATGGCTCCT ACCCATTTCA GGCCCTGCGT 
CAGCGCGCCC ATGGCGGCAT TGATGTGAAG GTGACCAGCG TTGCACTGGC TAAGTACATG 
AGCATGCTGG CAGCCAGTGG CCCCACGTGG GACCAGTTGC CACCGTTCCA GTGGAGTAAA 
TCACCATTCC ACAACATGCT GCACATGGGC CAGCCTGATC TTTGGATGTT CTCACCTGTC 
AAGGTCCCAT GGGACTGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq NP_640348.2
CDS12..1769
Translation

Target ORF information:

RefSeq Version NM_139255.3
Organism Rattus norvegicus(Norway rat)
Definition Rattus norvegicus phospholipase B domain containing 2 (Plbd2), mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
 NM_139255.3

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
1441
1501
1561
1621
1681
1741
ATGGCGGCCC CCATGGACCG GACCCATGGT GGCCGGGCGG CCCGGGCGCT GCGGCGGGCT 
CTGGCGCTGG CCTCGCTGGC CGGGCTATTG CTGAGCGGCC TGGCGGGTGC TCTCCCCACC 
CTCGGGCCCG GCTGGCGGCG CCAAAACCCC GAGCCGCCGG CCTCCCGCAC CCGCTCGCTG 
CTGCTGGACG CCGCTTCGGG CCAGCTGCGC CTGGAGTACG GCTTCCACCC CGATGCGGTG 
GCCTGGGCTA ACCTCACCAA CGCCATCCGC GAGACTGGGT GGGCCTATCT GGACCTGGGC 
ACAAATGGCA GCTACAATGA CAGCCTGCAG GCCTATGCAG CTGGTGTGGT GGAGGCCTCT 
GTGTCCGAGG AGCTCATCTA CATGCACTGG ATGAACACGG TGGTCAATTA CTGCGGCCCC 
TTCGAGTACG AAGTCGGCTA CTGTGAGAAG CTCAAGAGCT TCCTGGAGGC CAACCTGGAG 
TGGATGCAGA GGGAAATGGA GCTTAGCCCG GACTCGCCAT ACTGGCACCA GGTGCGGCTG 
ACCCTCCTGC AGCTGAAAGG CCTGGAGGAC AGCTATGAAG GCCGTTTAAC CTTCCCAACT 
GGGAGGTTCA ACATCAAACC CTTGGGGTTC CTCCTGCTGC AGATCTCTGG AGATCTGGAA 
GACCTAGAGC CAGCCCTGAA TAAGACCAAC ACCAAGCCTT CCGTGGGCTC CGGTTCGTGC 
TCTGCCCTCA TCAAGCTGCT GCCCGGCAGC CATGATCTCC TGGTGGCTCA CAACACTTGG 
AACTCCTACC AGAACATGTT ACGCATCATC AAGAAGTACC GGCTGCAGTT CCGGGAGGGG 
CCGCAAGAGG AGTACCCCCT GATTGCCGGC AACAACTTGA TTTTTTCGTC TTACCCGGGC 
ACCATCTTCT CCGGTGATGA CTTCTACATC CTGGGCAGTG GGCTGGTCAC CCTGGAGACC 
ACCATCGGCA ACAAGAACCC AGCGCTGTGG AAGTACGTGC AACCCCAGGG CTGTGTGCTG 
GAGTGGATTC GAAACATTGT GGCCAACCGC CTGGCCTTGG ATGGGGCCAC CTGGGCAGAT 
GTCTTCAGGC GGTTCAATAG TGGCACGTAT AATAACCAGT GGATGATTGT GGACTACAAG 
GCATTCATCC CCAATGGGCC CAGCCCTGGA AGCCGGGTGC TCACCATCCT AGAACAGATC 
CCGGGCATGG TGGTGGTGGC GGACAAGACT GCAGAGCTCT ACAAGACGAC CTACTGGGCT 
AGCTACAACA TCCCGTACTT TGAGAGTGTT TTCAACGCTA GTGGTCTGCA GGCCCTGGTA 
GCCCAGTACG GAGATTGGTT CTCCTACACC AGGAACCCTC GAGCCAAGAT CTTCCAGAGG 
GACCAGTCAC TAGTGGAGGA CGTAGACACC ATGGTCCGGC TCATGAGGTA CAATGACTTC 
CTTCATGACC CTCTGTCGTT GTGTGAGGCC TGCAGCCCGA AGCCCAACGC AGAGAACGCC 
ATCTCTGCCC GCTCTGATCT CAACCCTGCT AATGGCTCCT ACCCATTTCA GGCCCTGCGT 
CAGCGCGCCC ATGGCGGCAT TGATGTGAAG GTGACCAGCG TTGCACTGGC TAAGTACATG 
AGCATGCTGG CAGCCAGTGG CCCCACGTGG GACCAGTTGC CACCGTTCCA GTGGAGTAAA 
TCACCATTCC ACAACATGCT GCACATGGGC CAGCCTGATC TTTGGATGTT CTCACCTGTC 
AAGGTCCCAT GGGACTGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

PubMed

book

Biochemical characterization and lysosomal localization of the mannose-6-phosphate protein p76 (hypothetical protein LOC196463).
The Biochemical journal402(3)449-58(2007 Mar)
Jensen AG,Chemali M,Chapel A,Kieffer-Jaquinod S,Jadot M,Garin J,Journet A


book

Molecular characterization of the hypothetical 66.3-kDa protein in mouse: lysosomal targeting, glycosylation, processing and tissue distribution.
FEBS letters580(24)5747-52(2006 Oct)
Deuschl F,Kollmann K,von Figura K,L?bke T