Gene Symbol | Prpf8 |
Entrez Gene ID | 287530 |
Full Name | pre-mRNA processing factor 8 |
General protein information |
|
Gene Type | protein-coding |
Organism | Rattus norvegicus(Norway rat) |
Genome |
ORF » Species Summary » Rattus norvegicus » Prpf8 cDNA ORF clone
gRNAs
Gene Symbol | Prpf8 |
Entrez Gene ID | 287530 |
Full Name | pre-mRNA processing factor 8 |
General protein information |
|
Gene Type | protein-coding |
Organism | Rattus norvegicus(Norway rat) |
Genome |
mRNA | Protein | Name |
---|---|---|
XM_006246892.3 | XP_006246954.1 | pre-mRNA-processing-splicing factor 8 isoform X1 |
NM_001191590.1 | NP_001178519.1 | pre-mRNA-processing-splicing factor 8 |
Rattus norvegicus (Norway rat) | Prpf8 | NP_001178519.1 |
Neurospora crassa | NCU07832 | XP_962953.1 |
Arabidopsis thaliana (thale cress) | SUS2 | NP_178124.2 |
PRPF8 | XP_001117328.1 | |
Canis lupus familiaris (dog) | PRPF8 | XP_854384.1 |
Drosophila melanogaster (fruit fly) | Prp8 | NP_610735.1 |
Caenorhabditis elegans (roundworm) | prp-8 | NP_498785.1 |
Schizosaccharomyces pombe (fission yeast) | spp42 | NP_593861.1 |
Magnaporthe oryzae (rice blast fungus) | MGG_05244 | XP_003712798.1 |
Oryza sativa (rice) | Os06g0167000 | NP_001056917.1 |
Homo sapiens (human) | PRPF8 | NP_006436.3 |
Anopheles gambiae (African malaria mosquito) | AgaP_AGAP006885 | XP_308873.2 |
Kluyveromyces lactis | KLLA0A05280g | XP_451233.1 |
Eremothecium gossypii | AGOS_ABR207W | NP_983156.2 |
Bos taurus (cattle) | PRPF8 | NP_001099108.1 |
Mus musculus (house mouse) | Prpf8 | NP_619600.2 |
Arabidopsis thaliana (thale cress) | AT4G38780 | NP_195589.2 |
Xenopus tropicalis (tropical clawed frog) | prpf8 | XP_002936105.1 |
Gallus gallus (chicken) | PRPF8 | XP_415805.2 |
Danio rerio (zebrafish) | prpf8 | NP_957270.2 |
Saccharomyces cerevisiae (baker's yeast) | PRP8 | NP_012035.1 |
Structure of a human catalytic step I spliceosome.
Zhan X, Yan C, Zhang X, Lei J, Shi Y
Science (New York, N.Y.)(2018 Jan)
Cryo-EM Structure of a Pre-catalytic Human Spliceosome Primed for Activation.
Bertram K, Agafonov DE, Dybkov O, Haselbach D, Leelaram MN, Will CL, Urlaub H, Kastner B, L?hrmann R, Stark H
Cell170(4)701-713.e11(2017 Aug)
Cryo-EM structure of a human spliceosome activated for step 2 of splicing.
Bertram K, Agafonov DE, Liu WT, Dybkov O, Will CL, Hartmuth K, Urlaub H, Kastner B, Stark H, L?hrmann R
Nature542(7641)318-323(2017 02)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following Prpf8 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the Prpf8 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | ORa07077 | |
Clone ID Related Accession (Same CDS sequence) | XM_006246892.3 , NM_001191590.1 | |
Accession Version | NM_001191590.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 7008bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-10-09 | |
Organism | Rattus norvegicus(Norway rat) | |
Product | pre-mRNA-processing-splicing factor 8 | |
Comment | Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from AABR07030039.1. On Jul 17, 2010 this sequence version replaced XM_213385.5. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications. ##Evidence-Data-START## RNAseq introns :: single sample supports all introns SAMD00052296, SAMEA2689603 [ECO:0000348] ##Evidence-Data-END## |
1 | ATGGCCGGAG TGTTTCCTTA CAGAGGGCCG GGTAACCCGG TGCCCGGCCC TCTAGCCCCG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001178519.1 |
CDS | 82..7089 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGGCCGGAG TGTTTCCTTA CAGAGGGCCG GGTAACCCGG TGCCCGGCCC TCTAGCCCCG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ORa07077 | |
Clone ID Related Accession (Same CDS sequence) | XM_006246892.3 , NM_001191590.1 | |
Accession Version | XM_006246892.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 7008bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-07-25 | |
Organism | Rattus norvegicus(Norway rat) | |
Product | pre-mRNA-processing-splicing factor 8 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005109.4) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Jul 26, 2016 this sequence version replaced XM_006246892.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGCCGGAG TGTTTCCTTA CAGAGGGCCG GGTAACCCGG TGCCCGGCCC TCTAGCCCCG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_006246954.1 |
CDS | 285..7292 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGGCCGGAG TGTTTCCTTA CAGAGGGCCG GGTAACCCGG TGCCCGGCCC TCTAGCCCCG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Structure of a human catalytic step I spliceosome. |
Cryo-EM Structure of a Pre-catalytic Human Spliceosome Primed for Activation. |
Cryo-EM structure of a human spliceosome activated for step 2 of splicing. |