Gene Symbol | Mmp17 |
Entrez Gene ID | 288626 |
Full Name | matrix metallopeptidase 17 |
General protein information |
|
Gene Type | protein-coding |
Organism | Rattus norvegicus(Norway rat) |
Genome |
ORF » Species Summary » Rattus norvegicus » Mmp17 cDNA ORF clone
Gene Symbol | Mmp17 |
Entrez Gene ID | 288626 |
Full Name | matrix metallopeptidase 17 |
General protein information |
|
Gene Type | protein-coding |
Organism | Rattus norvegicus(Norway rat) |
Genome |
mRNA | Protein | Name |
---|---|---|
XM_017598509.1 | XP_017453998.1 | matrix metalloproteinase-17 isoform X2 |
XM_017598510.1 | XP_017453999.1 | matrix metalloproteinase-17 isoform X3 |
XM_017598508.1 | XP_017453997.1 | matrix metalloproteinase-17 isoform X1 |
NM_001105925.1 | NP_001099395.1 | matrix metalloproteinase-17 precursor |
Pan troglodytes (chimpanzee) | MMP17 | XP_509485.2 |
Gallus gallus (chicken) | MMP17 | XP_415092.3 |
Danio rerio (zebrafish) | mmp17a | XP_698601.6 |
Rattus norvegicus (Norway rat) | Mmp17 | NP_001099395.1 |
Anopheles gambiae (African malaria mosquito) | AgaP_AGAP011870 | XP_320653.4 |
Xenopus tropicalis (tropical clawed frog) | mmp17 | NP_001096469.1 |
Canis lupus familiaris (dog) | MMP17 | XP_852332.3 |
Bos taurus (cattle) | MMP17 | XP_002694502.1 |
Mus musculus (house mouse) | Mmp17 | NP_035976.3 |
Drosophila melanogaster (fruit fly) | Mmp2 | NP_995788.1 |
Homo sapiens (human) | MMP17 | NP_057239.4 |
LOC100430708 | XP_002798895.1 | |
Caenorhabditis elegans (roundworm) | zmp-1 | NP_741156.1 |
GPR18 is required for a normal CD8?? intestinal intraepithelial lymphocyte compartment.
Wang X, Sumida H, Cyster JG
The Journal of experimental medicine211(12)2351-9(2014 Nov)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following Mmp17 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the Mmp17 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | ORa57915 | |
Clone ID Related Accession (Same CDS sequence) | XM_017598510.1 | |
Accession Version | XM_017598510.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1530bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-07-25 | |
Organism | Rattus norvegicus(Norway rat) | |
Product | matrix metalloproteinase-17 isoform X3 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005111.4) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGCAACAGT TTGGCGGTCT GGAGACCACT GGCATCCTGG ATGAGGCCAC TCTGGCACTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_017453999.1 |
CDS | 1655..3184 |
Translation |
Target ORF information:
Target ORF information:
|
XM_017598510.1 |
1 | ATGCAACAGT TTGGCGGTCT GGAGACCACT GGCATCCTGG ATGAGGCCAC TCTGGCACTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ORa11684 | |
Clone ID Related Accession (Same CDS sequence) | XM_017598509.1 , NM_001105925.1 | |
Accession Version | NM_001105925.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1764bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2017-10-01 | |
Organism | Rattus norvegicus(Norway rat) | |
Product | matrix metalloproteinase-17 precursor | |
Comment | Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from CH473973.1. On or before Aug 24, 2014 this sequence version replaced XM_008769178.1, XM_001072688.1, XM_239639.4. ##Evidence-Data-START## RNAseq introns :: single sample supports all introns SAMD00052296, SAMD00052297 [ECO:0000348] ##Evidence-Data-END## |
1 | ATGGGACGCC GCCCGCGGGG ACCTGGATCC CCCCGGGGAC CTGGCCCTCC ACGACCCGGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001099395.1 |
CDS | 124..1887 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001105925.1 |
1 | ATGGGACGCC GCCCGCGGGG ACCTGGATCC CCCCGGGGAC CTGGCCCTCC ACGACCCGGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ORa11684 | |
Clone ID Related Accession (Same CDS sequence) | XM_017598509.1 , NM_001105925.1 | |
Accession Version | XM_017598509.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1764bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-07-25 | |
Organism | Rattus norvegicus(Norway rat) | |
Product | matrix metalloproteinase-17 isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005111.4) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGGACGCC GCCCGCGGGG ACCTGGATCC CCCCGGGGAC CTGGCCCTCC ACGACCCGGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_017453998.1 |
CDS | 124..1887 |
Translation |
Target ORF information:
Target ORF information:
|
XM_017598509.1 |
1 | ATGGGACGCC GCCCGCGGGG ACCTGGATCC CCCCGGGGAC CTGGCCCTCC ACGACCCGGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ORa57914 | |
Clone ID Related Accession (Same CDS sequence) | XM_017598508.1 | |
Accession Version | XM_017598508.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1779bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-07-25 | |
Organism | Rattus norvegicus(Norway rat) | |
Product | matrix metalloproteinase-17 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005111.4) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGGACGCC GCCCGCGGGG ACCTGGATCC CCCCGGGGAC CTGGCCCTCC ACGACCCGGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_017453997.1 |
CDS | 125..1903 |
Translation |
Target ORF information:
Target ORF information:
|
XM_017598508.1 |
1 | ATGGGACGCC GCCCGCGGGG ACCTGGATCC CCCCGGGGAC CTGGCCCTCC ACGACCCGGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
GPR18 is required for a normal CD8?? intestinal intraepithelial lymphocyte compartment. |