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Trim52 cDNA ORF clone, Rattus norvegicus(Norway rat)

Summary

Gene Symbol Trim52
Entrez Gene ID 290458
Full Name tripartite motif-containing 52
Synonyms RGD1565615
General protein information
Preferred Names

tripartite motif-containing 52

Names

tripartite motif-containing 52
Gene Type protein-coding
Organism Rattus norvegicus(Norway rat)
Genome

15

15q22

Reference Sequences (RefSeq)

mRNA and Protein(s)

mRNA Protein Name
NM_001106056.1 NP_001099526.1 tripartite motif-containing 52
XM_006252435.3 XP_006252497.1 tripartite motif-containing 52 isoform X1

Pathways from BioSystems


Homologies


Rattus norvegicus (Norway rat) Trim52 NP_001099526.1
Mus musculus (house mouse) Trim52 NP_941003.1

Gene Ontology


Bibliography

Related articles in PubMed

TRIM protein-mediated regulation of inflammatory and innate immune signaling and its association with antiretroviral activity.
Uchil PD, Hinz A, Siegel S, Coenen-Stass A, Pertel T, Luban J, Mothes W
Journal of virology87(1)257-72(2013 Jan)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following Trim52 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the Trim52 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
ORa36920 NM_001106056.1
Latest version!		 Rattus norvegicus tripartite motif-containing 52 (Trim52), mRNA. pcDNA3.1+/C-(K)DYK or customized vector TBD $139.30
$199.00
ORa36920 XM_006252435.3
Latest version!		 Rattus norvegicus tripartite motif-containing 52 (Trim52), transcript variant X8, mRNA. pcDNA3.1+/C-(K)DYK or customized vector TBD $139.30
$199.00

ORF Online Only Promotion

Next-day Shipping ORF Clones ( in default vector with tag)
1 Clone 30% OFF
2-4 Clone 40% OFF
5 or more Clone 50% OFF
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30% OFF

*Business Day

** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)


CloneID ORa36920
Clone ID Related Accession (Same CDS sequence) NM_001106056.1 , XM_006252435.3
Accession Version NM_001106056.1 Latest version! Documents for ORF clone product in default vector
Sequence Information ORF Nucleotide Sequence (Length: 708bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ™ Seamless cloning technology
Insert Structure linear
Update Date 2017-09-30
Organism Rattus norvegicus(Norway rat)
Product tripartite motif-containing 52
Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from CH473951.1. On or before Oct 4, 2007 this sequence version replaced XM_224468.3, XM_001077454.1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignment to the mouse ortholog (NM_198601.4). 

1
61
121
181
241
301
361
421
481
541
601
661
ATGGCCGCCC CTACAGGGCC TCCCAGCCCT ATGCAGTCAC TTCGGGAAGA AGCAGTATGT 
GCCATCTGTC TGGATTACTT TAAGGACCCC GTGTCCATTG GCTGTGGGCA CAACTTCTGC 
CGAGGGTGTG TGACCCAGCT GTGGGGCAAG GAAGATGAAC AGGACCGGGA ACCGCCTGCT 
GTAGGGAACC ACGTCATTAG AGAGGTTTTG TTTCATAGGT ACACAGAACA GGAGGTGTTT 
CAGCACCGAG CACATGCTGG ACGCTGGGCT GCTCATAGCC ATAGAAGGCA TCGGGGCAAT 
GCAGACTCTG TGTGGGATGA TGAGGAAGAA GACTGGAACA GTTTACAAGG ACTGGTACAT 
GACCTGAGAA TTAGGGTTTT TCCAGAAGAA AGAGATGAAC ACCCCCACGA TGGCCACCAA 
TACCATCACT ATGGCCGATA CCGACACCGT CCAGTTTTCC GCCGTGGTCC CCCACATCCA 
CCTGTGCGTC GGCAGCTCTA TCCAGATGCC CGACCACGAT CTCCACCTCG AGTACGATCT 
CCACCTCGAG TACATTCTCC ACCTCGAGTA CGTTCTCCAC CTCGTCCCAC ATCACAGGTC 
TTCAGCTGCC CACAATGCCG AAGGACATTT CCAAGTCGCA GTTTTCGACC CAATTTGCAG 
CTGGCCAACA TGGTCCATAT AATTCGCCAG ATTTGCCATA CGCCATGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq NP_001099526.1
CDS97..804
Translation

Target ORF information:

RefSeq Version NM_001106056.1
Organism Rattus norvegicus(Norway rat)
Definition Rattus norvegicus tripartite motif-containing 52 (Trim52), mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
 NM_001106056.1

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
601
661
ATGGCCGCCC CTACAGGGCC TCCCAGCCCT ATGCAGTCAC TTCGGGAAGA AGCAGTATGT 
GCCATCTGTC TGGATTACTT TAAGGACCCC GTGTCCATTG GCTGTGGGCA CAACTTCTGC 
CGAGGGTGTG TGACCCAGCT GTGGGGCAAG GAAGATGAAC AGGACCGGGA ACCGCCTGCT 
GTAGGGAACC ACGTCATTAG AGAGGTTTTG TTTCATAGGT ACACAGAACA GGAGGTGTTT 
CAGCACCGAG CACATGCTGG ACGCTGGGCT GCTCATAGCC ATAGAAGGCA TCGGGGCAAT 
GCAGACTCTG TGTGGGATGA TGAGGAAGAA GACTGGAACA GTTTACAAGG ACTGGTACAT 
GACCTGAGAA TTAGGGTTTT TCCAGAAGAA AGAGATGAAC ACCCCCACGA TGGCCACCAA 
TACCATCACT ATGGCCGATA CCGACACCGT CCAGTTTTCC GCCGTGGTCC CCCACATCCA 
CCTGTGCGTC GGCAGCTCTA TCCAGATGCC CGACCACGAT CTCCACCTCG AGTACGATCT 
CCACCTCGAG TACATTCTCC ACCTCGAGTA CGTTCTCCAC CTCGTCCCAC ATCACAGGTC 
TTCAGCTGCC CACAATGCCG AAGGACATTT CCAAGTCGCA GTTTTCGACC CAATTTGCAG 
CTGGCCAACA TGGTCCATAT AATTCGCCAG ATTTGCCATA CGCCATGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

CloneID ORa36920
Clone ID Related Accession (Same CDS sequence) NM_001106056.1 , XM_006252435.3
Accession Version XM_006252435.3 Latest version! Documents for ORF clone product in default vector
Sequence Information ORF Nucleotide Sequence (Length: 708bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ™ Seamless cloning technology
Insert Structure linear
Update Date 2016-07-25
Organism Rattus norvegicus(Norway rat)
Product tripartite motif-containing 52 isoform X1
Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005114.4) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Jul 26, 2016 this sequence version replaced XM_006252435.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

1
61
121
181
241
301
361
421
481
541
601
661
ATGGCCGCCC CTACAGGGCC TCCCAGCCCT ATGCAGTCAC TTCGGGAAGA AGCAGTATGT 
GCCATCTGTC TGGATTACTT TAAGGACCCC GTGTCCATTG GCTGTGGGCA CAACTTCTGC 
CGAGGGTGTG TGACCCAGCT GTGGGGCAAG GAAGATGAAC AGGACCGGGA ACCGCCTGCT 
GTAGGGAACC ACGTCATTAG AGAGGTTTTG TTTCATAGGT ACACAGAACA GGAGGTGTTT 
CAGCACCGAG CACATGCTGG ACGCTGGGCT GCTCATAGCC ATAGAAGGCA TCGGGGCAAT 
GCAGACTCTG TGTGGGATGA TGAGGAAGAA GACTGGAACA GTTTACAAGG ACTGGTACAT 
GACCTGAGAA TTAGGGTTTT TCCAGAAGAA AGAGATGAAC ACCCCCACGA TGGCCACCAA 
TACCATCACT ATGGCCGATA CCGACACCGT CCAGTTTTCC GCCGTGGTCC CCCACATCCA 
CCTGTGCGTC GGCAGCTCTA TCCAGATGCC CGACCACGAT CTCCACCTCG AGTACGATCT 
CCACCTCGAG TACATTCTCC ACCTCGAGTA CGTTCTCCAC CTCGTCCCAC ATCACAGGTC 
TTCAGCTGCC CACAATGCCG AAGGACATTT CCAAGTCGCA GTTTTCGACC CAATTTGCAG 
CTGGCCAACA TGGTCCATAT AATTCGCCAG ATTTGCCATA CGCCATGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq XP_006252497.1
CDS985..1692
Translation

Target ORF information:

RefSeq Version XM_006252435.3
Organism Rattus norvegicus(Norway rat)
Definition Rattus norvegicus tripartite motif-containing 52 (Trim52), transcript variant X8, mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
 XM_006252435.3

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
601
661
ATGGCCGCCC CTACAGGGCC TCCCAGCCCT ATGCAGTCAC TTCGGGAAGA AGCAGTATGT 
GCCATCTGTC TGGATTACTT TAAGGACCCC GTGTCCATTG GCTGTGGGCA CAACTTCTGC 
CGAGGGTGTG TGACCCAGCT GTGGGGCAAG GAAGATGAAC AGGACCGGGA ACCGCCTGCT 
GTAGGGAACC ACGTCATTAG AGAGGTTTTG TTTCATAGGT ACACAGAACA GGAGGTGTTT 
CAGCACCGAG CACATGCTGG ACGCTGGGCT GCTCATAGCC ATAGAAGGCA TCGGGGCAAT 
GCAGACTCTG TGTGGGATGA TGAGGAAGAA GACTGGAACA GTTTACAAGG ACTGGTACAT 
GACCTGAGAA TTAGGGTTTT TCCAGAAGAA AGAGATGAAC ACCCCCACGA TGGCCACCAA 
TACCATCACT ATGGCCGATA CCGACACCGT CCAGTTTTCC GCCGTGGTCC CCCACATCCA 
CCTGTGCGTC GGCAGCTCTA TCCAGATGCC CGACCACGAT CTCCACCTCG AGTACGATCT 
CCACCTCGAG TACATTCTCC ACCTCGAGTA CGTTCTCCAC CTCGTCCCAC ATCACAGGTC 
TTCAGCTGCC CACAATGCCG AAGGACATTT CCAAGTCGCA GTTTTCGACC CAATTTGCAG 
CTGGCCAACA TGGTCCATAT AATTCGCCAG ATTTGCCATA CGCCATGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

PubMed

book

TRIM protein-mediated regulation of inflammatory and innate immune signaling and its association with antiretroviral activity.
Journal of virology87(1)257-72(2013 Jan)
Uchil PD,Hinz A,Siegel S,Coenen-Stass A,Pertel T,Luban J,Mothes W