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Clcn6 cDNA ORF clone, Rattus norvegicus(Norway rat)

Summary

Gene Symbol Clcn6
Entrez Gene ID 295586
Full Name chloride voltage-gated channel 6
General protein information
Preferred Names

chloride voltage-gated channel 6

Names

chloride transport protein 6
chloride channel 6
chloride channel, voltage-sensitive 6
Gene Type protein-coding
Organism Rattus norvegicus(Norway rat)
Genome

5

5q36

Reference Sequences (RefSeq)

mRNA and Protein(s)

mRNA Protein Name
XM_006239377.3 XP_006239439.1 chloride transport protein 6 isoform X1
NM_001106479.1 NP_001099949.1 chloride transport protein 6
XM_006239378.3 XP_006239440.1 chloride transport protein 6 isoform X1

Pathways from BioSystems


Homologies


Homo sapiens (human) CLCN6 NP_001277.1
Pan troglodytes (chimpanzee) CLCN6 XP_001140805.1
Mus musculus (house mouse) Clcn6 NP_036059.1
Danio rerio (zebrafish) clcn6 XP_696527.3
Rattus norvegicus (Norway rat) Clcn6 NP_001099949.1
CLCN6 XP_001104721.1
Bos taurus (cattle) CLCN6 NP_001192799.1
Gallus gallus (chicken) CLCN6 XP_417644.2
Xenopus tropicalis (tropical clawed frog) clcn6 XP_002937575.2
Canis lupus familiaris (dog) CLCN6 XP_005618051.1
Arabidopsis thaliana (thale cress) CLC-D NP_197996.1

Gene Ontology


Bibliography

Related articles in PubMed

The rs3737964 single-nucleotide polymorphism of the chloride channel-6 gene as a risk factor for coronary heart disease.
Zhang L, Zhang T, Xiang Z, Lu S
Molecular genetics & genomic medicine3(6)537-42(2015 Nov)

Identifying multiple causative genes at a single GWAS locus.
Flister MJ, Tsaih SW, O'Meara CC, Endres B, Hoffman MJ, Geurts AM, Dwinell MR, Lazar J, Jacob HJ, Moreno C
Genome research23(12)1996-2002(2013 Dec)

Integral and associated lysosomal membrane proteins.
Schr?der B, Wrocklage C, Pan C, J?ger R, K?sters B, Sch?fer H, Els?sser HP, Mann M, Hasilik A
Traffic (Copenhagen, Denmark)8(12)1676-86(2007 Dec)

Chloride channels and the reactions of cells to topography.
Tobasnick G, Curtis AS
European cells & materials249-61(2001 Dec)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following Clcn6 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the Clcn6 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
ORa01401 NM_001106479.1
Latest version!		 Rattus norvegicus chloride voltage-gated channel 6 (Clcn6), mRNA. pcDNA3.1-C-(k)DYK or customized vector 12-14 $510.30
$729.00
ORa28889 XM_006239378.3
Latest version!		 Rattus norvegicus chloride voltage-gated channel 6 (Clcn6), transcript variant X1, mRNA. pcDNA3.1-C-(k)DYK or customized vector 12-14 $391.30
$559.00
ORa28889 XM_006239377.3
Latest version!		 Rattus norvegicus chloride voltage-gated channel 6 (Clcn6), transcript variant X2, mRNA. pcDNA3.1-C-(k)DYK or customized vector 12-14 $391.30
$559.00

ORF Online Only Promotion

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)


CloneID ORa01401
Clone ID Related Accession (Same CDS sequence) NM_001106479.1
Accession Version NM_001106479.1 Latest version! Documents for ORF clone product in default vector
Sequence Information ORF Nucleotide Sequence (Length: 2613bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ™ Seamless cloning technology
Insert Structure linear
Update Date 2019-07-30
Organism Rattus norvegicus(Norway rat)
Product chloride transport protein 6
Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from CH473968.1. On or before Oct 4, 2007 this sequence version replaced XM_001074014.1, XM_227870.4. ##Evidence-Data-START## RNAseq introns :: mixed/partial sample support SAMD00052296, SAMD00052297 [ECO:0000350] ##Evidence-Data-END## 

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
1441
1501
1561
1621
1681
1741
1801
1861
1921
1981
2041
2101
2161
2221
2281
2341
2401
2461
2521
2581
ATGGCGGGGT GCAGGGGGTC TGTGTGCTGC TGCTGCAGGT GGTGCTGCTG CTGCGGCGAA 
CGCGAGAGCC GCACTCCCGA GGAGCTGACC ATCCTTGGGG AGACACAGGA AGAGGAAGAT 
GAGATCCTTC CAAGGAAAGA CTATGAGAGT CTGGACTATG ACCGCTGTAT CAACGACCCT 
TACCTGGAGG TATTGGAGAC CATGGATAAT AAGAAAGGGC GAAGACATGA GGCGGTGAAG 
TGGATGGTGG TGTTTGCCAT TGGCGTCTGT ACTGGGCTGG TGGGCCTCTT CGTGGACTTT 
TCTGTGCGAC TCTTCACCCA ACTCAAGTTC GGAGTGGTTC AAACGTCGGT GGAGGAATGC 
AGTCAGAAAG GCTGCCTTGC CCTGTCTCTC CTGGAACTCC TTGGCTTTAA CTTGACCTTT 
GTCTTCCTGG CAAGCCTTCT TGTCTTGATA GAGCCGGTGG CAGCAGGCTC TGGAATCCCA 
GAGATCAAGT GCTATCTGAA TGGTGTGAAA GTGCCAGGAA TTGTCCGGCT CCGAACCCTG 
CTCTGCAAAG TCTTTGGGGT GCTGTTCAGT GTGGCTGGAG GGCTCTTTGT GGGGAAAGAA 
GGCCCCATGA TCCACAGTGG TGCCGTGGTA GGAGCTGGCC TCCCTCAGTT TCAGAGCATC 
TCCTTAAGGA AGATCCAGTT TAACTTCCCC TACTTCCGCA GCGACAGAGA CAAGCGTGAC 
TTCGTATCAG CAGGGGCGGC TGCTGGAGTT GCTGCAGCTT TTGGGGCCCC TATAGGGGGC 
ACCTTGTTCA GCCTGGAGGA GGGCTCGTCC TTCTGGAACC AGGGACTCAC GTGGAAAGTG 
CTCTTCTGTT CCATGTCTGC CACCTTCACC CTCAACTTCT TCCGCTCTGG GATCCAGTTT 
GGAAGTTGGG GTGCCTTCCA GCTGCCTGGA CTGCTGAACT TTGGTGAATT TAAGTGCTCT 
GACTCTGATA AAAAATGTCA TCTCTGGACA GCTATGGATT TGGGTTTCTT CGTCGTGATG 
GGGGTCATTG GGGGCCTCCT GGGAGCCACA TTCAACTGTC TGAACAAGAG GCTTGCAAAG 
TACCGTATGC GCAACGTGCA CCCGAAACCT AAGCTCGTCA GGGTCTTAGA GAGCCTCTTG 
GTGTCCCTGG TGACGACTGT GGTGGTGTTT GTGGCCTCCA TGGTGTTGGG AGAATGCCGA 
CAGATGTCTT CCACGAGTCA AACGGGTAAT GGCTCATTCC AGCTCCAGGT CACATCGGAA 
GATGTGAATT CAACTATCAA GACATTTTTC TGTCCCAATG ACACCTACAA CGACATGGCC 
ACACTCTTCT TCAACTCCCA GGAGTCTGCC ATCCTGCAGC TCTTCCATCA GGATGGGACT 
TTCAGCCCCG TCACCCTGGC CTTATTCTTC GCCCTCTATT TCCTGATGGC ATGCTGGACT 
TTCGGCACCT CTGTCCCCAG TGGCCTCTTC GTGCCTTCCC TGCTGTGTGG AGCAGCTTTT 
GGACGTTTAG TTGCCAATGT CCTGAAAAGC TACATTGGAC TGGGCCACCT CTATTCTGGG 
ACCTTCGCCC TGATTGGTGC GGCAGCTTTC TTGGGTGGGG TTGTAAGAAT GACCATCAGC 
CTCACAGTCA TCCTGATTGA GTCCACAAAT GAGATCACCT ATGGGCTTCC TATTATGGTC 
ACTTTGATGG TGGCCAAGTG GACTGGAGAC TTTTTCAATA AGGGCATTTA CGACATCCAC 
ATTGGGCTGA GAGGTGTGCC TCTTCTGGAG TGGGAGACAG AGGTGGAGAT GGACAGGCTG 
AGAGCCAGCG ACATCATGGA GCCCAACTTG ACGTATGTCT ACCCACATAC TCGTATCCAG 
TCTCTGGTGA GCATCCTGCG TACTACAGTC CACCATGCCT TCCCAGTGGT CACAGAGAAT 
CGCGGCAACG AGAAGGAGTT CATGAAAGGC AACCAGCTCA TAAGCAACAA CATTAAGTTC 
AAGAAGTCCA GCATCCTCAC CCGTGCTGGT GAGCAGCGCA AGCGGGGCCA GTCCATGAAG 
TCTTACCCTT CCAGCGAGCT GCGCAACGTG TGTGATGAGC ATGTGGCTTC TGAGGAGCCA 
GCAGAGAAGG AGGACCTGCT ACAGCAGATG CTGGAGAGGA GATACACTCC CTACCCCAAC 
CTATACCCTG ACCAGTCCCC GAGTGAAGAC TGGACCATGG AGGAGCGATT CCGTCCGCTG 
ACCTTCCATG GCCTCGTCCT GCGCTCCCAG CTCGTCACCC TGCTCGTCCG AGGCGTGTGT 
TACTCGGAAA GTCAGTCCAG TGCCAGCCAA CCACGCCTTT CTTATGCTGA GATGGCTGAG 
GACTACCCGA GGTTTCCGGA CATACATGAC CTGGACCTCA CACTGCTGAA TCCCCGCATG 
ATTGTGGACG TCACACCATA TATGAATCCT TCACCATTTA CTGTCTCCCC CAACACCCAC 
GTTTCTCAAG TTTTCAACCT GTTCAGAACC ATGGGCCTGC GCCACTTGCC GGTGGTGAAT 
GCGGTGGGCG AGATCGTGGG GATCATTACA CGACACAACC TGACGACTGA GTTCCTGCAG 
GCCCGGCTAC GGCAGCATTA CCAGACCCTC TGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq NP_001099949.1
CDS31..2643
Translation

Target ORF information:

RefSeq Version NM_001106479.1
Organism Rattus norvegicus(Norway rat)
Definition Rattus norvegicus chloride voltage-gated channel 6 (Clcn6), mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
 NM_001106479.1

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
1441
1501
1561
1621
1681
1741
1801
1861
1921
1981
2041
2101
2161
2221
2281
2341
2401
2461
2521
2581
ATGGCGGGGT GCAGGGGGTC TGTGTGCTGC TGCTGCAGGT GGTGCTGCTG CTGCGGCGAA 
CGCGAGAGCC GCACTCCCGA GGAGCTGACC ATCCTTGGGG AGACACAGGA AGAGGAAGAT 
GAGATCCTTC CAAGGAAAGA CTATGAGAGT CTGGACTATG ACCGCTGTAT CAACGACCCT 
TACCTGGAGG TATTGGAGAC CATGGATAAT AAGAAAGGGC GAAGACATGA GGCGGTGAAG 
TGGATGGTGG TGTTTGCCAT TGGCGTCTGT ACTGGGCTGG TGGGCCTCTT CGTGGACTTT 
TCTGTGCGAC TCTTCACCCA ACTCAAGTTC GGAGTGGTTC AAACGTCGGT GGAGGAATGC 
AGTCAGAAAG GCTGCCTTGC CCTGTCTCTC CTGGAACTCC TTGGCTTTAA CTTGACCTTT 
GTCTTCCTGG CAAGCCTTCT TGTCTTGATA GAGCCGGTGG CAGCAGGCTC TGGAATCCCA 
GAGATCAAGT GCTATCTGAA TGGTGTGAAA GTGCCAGGAA TTGTCCGGCT CCGAACCCTG 
CTCTGCAAAG TCTTTGGGGT GCTGTTCAGT GTGGCTGGAG GGCTCTTTGT GGGGAAAGAA 
GGCCCCATGA TCCACAGTGG TGCCGTGGTA GGAGCTGGCC TCCCTCAGTT TCAGAGCATC 
TCCTTAAGGA AGATCCAGTT TAACTTCCCC TACTTCCGCA GCGACAGAGA CAAGCGTGAC 
TTCGTATCAG CAGGGGCGGC TGCTGGAGTT GCTGCAGCTT TTGGGGCCCC TATAGGGGGC 
ACCTTGTTCA GCCTGGAGGA GGGCTCGTCC TTCTGGAACC AGGGACTCAC GTGGAAAGTG 
CTCTTCTGTT CCATGTCTGC CACCTTCACC CTCAACTTCT TCCGCTCTGG GATCCAGTTT 
GGAAGTTGGG GTGCCTTCCA GCTGCCTGGA CTGCTGAACT TTGGTGAATT TAAGTGCTCT 
GACTCTGATA AAAAATGTCA TCTCTGGACA GCTATGGATT TGGGTTTCTT CGTCGTGATG 
GGGGTCATTG GGGGCCTCCT GGGAGCCACA TTCAACTGTC TGAACAAGAG GCTTGCAAAG 
TACCGTATGC GCAACGTGCA CCCGAAACCT AAGCTCGTCA GGGTCTTAGA GAGCCTCTTG 
GTGTCCCTGG TGACGACTGT GGTGGTGTTT GTGGCCTCCA TGGTGTTGGG AGAATGCCGA 
CAGATGTCTT CCACGAGTCA AACGGGTAAT GGCTCATTCC AGCTCCAGGT CACATCGGAA 
GATGTGAATT CAACTATCAA GACATTTTTC TGTCCCAATG ACACCTACAA CGACATGGCC 
ACACTCTTCT TCAACTCCCA GGAGTCTGCC ATCCTGCAGC TCTTCCATCA GGATGGGACT 
TTCAGCCCCG TCACCCTGGC CTTATTCTTC GCCCTCTATT TCCTGATGGC ATGCTGGACT 
TTCGGCACCT CTGTCCCCAG TGGCCTCTTC GTGCCTTCCC TGCTGTGTGG AGCAGCTTTT 
GGACGTTTAG TTGCCAATGT CCTGAAAAGC TACATTGGAC TGGGCCACCT CTATTCTGGG 
ACCTTCGCCC TGATTGGTGC GGCAGCTTTC TTGGGTGGGG TTGTAAGAAT GACCATCAGC 
CTCACAGTCA TCCTGATTGA GTCCACAAAT GAGATCACCT ATGGGCTTCC TATTATGGTC 
ACTTTGATGG TGGCCAAGTG GACTGGAGAC TTTTTCAATA AGGGCATTTA CGACATCCAC 
ATTGGGCTGA GAGGTGTGCC TCTTCTGGAG TGGGAGACAG AGGTGGAGAT GGACAGGCTG 
AGAGCCAGCG ACATCATGGA GCCCAACTTG ACGTATGTCT ACCCACATAC TCGTATCCAG 
TCTCTGGTGA GCATCCTGCG TACTACAGTC CACCATGCCT TCCCAGTGGT CACAGAGAAT 
CGCGGCAACG AGAAGGAGTT CATGAAAGGC AACCAGCTCA TAAGCAACAA CATTAAGTTC 
AAGAAGTCCA GCATCCTCAC CCGTGCTGGT GAGCAGCGCA AGCGGGGCCA GTCCATGAAG 
TCTTACCCTT CCAGCGAGCT GCGCAACGTG TGTGATGAGC ATGTGGCTTC TGAGGAGCCA 
GCAGAGAAGG AGGACCTGCT ACAGCAGATG CTGGAGAGGA GATACACTCC CTACCCCAAC 
CTATACCCTG ACCAGTCCCC GAGTGAAGAC TGGACCATGG AGGAGCGATT CCGTCCGCTG 
ACCTTCCATG GCCTCGTCCT GCGCTCCCAG CTCGTCACCC TGCTCGTCCG AGGCGTGTGT 
TACTCGGAAA GTCAGTCCAG TGCCAGCCAA CCACGCCTTT CTTATGCTGA GATGGCTGAG 
GACTACCCGA GGTTTCCGGA CATACATGAC CTGGACCTCA CACTGCTGAA TCCCCGCATG 
ATTGTGGACG TCACACCATA TATGAATCCT TCACCATTTA CTGTCTCCCC CAACACCCAC 
GTTTCTCAAG TTTTCAACCT GTTCAGAACC ATGGGCCTGC GCCACTTGCC GGTGGTGAAT 
GCGGTGGGCG AGATCGTGGG GATCATTACA CGACACAACC TGACGACTGA GTTCCTGCAG 
GCCCGGCTAC GGCAGCATTA CCAGACCCTC TGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

CloneID ORa28889
Clone ID Related Accession (Same CDS sequence) XM_006239377.3 , XM_006239378.3
Accession Version XM_006239377.3 Latest version! Documents for ORF clone product in default vector
Sequence Information ORF Nucleotide Sequence (Length: 2412bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ™ Seamless cloning technology
Insert Structure linear
Update Date 2016-07-25
Organism Rattus norvegicus(Norway rat)
Product chloride transport protein 6 isoform X1
Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005104.4) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jul 26, 2016 this sequence version replaced XM_006239377.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
1441
1501
1561
1621
1681
1741
1801
1861
1921
1981
2041
2101
2161
2221
2281
2341
2401
ATGGATAATA AGAAAGGGCG AAGACATGAG GCGGTGAAGT GGATGGTGGT GTTTGCCATT 
GGCGTCTGTA CTGGGCTGGT GGGCCTCTTC GTGGACTTTT CTGTGCGACT CTTCACCCAA 
CTCAAGTTCG GAGTGGTTCA AACGTCGGTG GAGGAATGCA GTCAGAAAGG CTGCCTTGCC 
CTGTCTCTCC TGGAACTCCT TGGCTTTAAC TTGACCTTTG TCTTCCTGGC AAGCCTTCTT 
GTCTTGATAG AGCCGGTGGC AGCAGGCTCT GGAATCCCAG AGATCAAGTG CTATCTGAAT 
GGTGTGAAAG TGCCAGGAAT TGTCCGGCTC CGAACCCTGC TCTGCAAAGT CTTTGGGGTG 
CTGTTCAGTG TGGCTGGAGG GCTCTTTGTG GGGAAAGAAG GCCCCATGAT CCACAGTGGT 
GCCGTGGTAG GAGCTGGCCT CCCTCAGTTT CAGAGCATCT CCTTAAGGAA GATCCAGTTT 
AACTTCCCCT ACTTCCGCAG CGACAGAGAC AAGCGTGACT TCGTATCAGC AGGGGCGGCT 
GCTGGAGTTG CTGCAGCTTT TGGGGCCCCT ATAGGGGGCA CCTTGTTCAG CCTGGAGGAG 
GGCTCGTCCT TCTGGAACCA GGGACTCACG TGGAAAGTGC TCTTCTGTTC CATGTCTGCC 
ACCTTCACCC TCAACTTCTT CCGCTCTGGG ATCCAGTTTG GAAGTTGGGG TGCCTTCCAG 
CTGCCTGGAC TGCTGAACTT TGGTGAATTT AAGTGCTCTG ACTCTGATAA AAAATGTCAT 
CTCTGGACAG CTATGGATTT GGGTTTCTTC GTCGTGATGG GGGTCATTGG GGGCCTCCTG 
GGAGCCACAT TCAACTGTCT GAACAAGAGG CTTGCAAAGT ACCGTATGCG CAACGTGCAC 
CCGAAACCTA AGCTCGTCAG GGTCTTAGAG AGCCTCTTGG TGTCCCTGGT GACGACTGTG 
GTGGTGTTTG TGGCCTCCAT GGTGTTGGGA GAATGCCGAC AGATGTCTTC CACGAGTCAA 
ACGGGTAATG GCTCATTCCA GCTCCAGGTC ACATCGGAAG ATGTGAATTC AACTATCAAG 
ACATTTTTCT GTCCCAATGA CACCTACAAC GACATGGCCA CACTCTTCTT CAACTCCCAG 
GAGTCTGCCA TCCTGCAGCT CTTCCATCAG GATGGGACTT TCAGCCCCGT CACCCTGGCC 
TTATTCTTCG CCCTCTATTT CCTGATGGCA TGCTGGACTT TCGGCACCTC TGTCCCCAGT 
GGCCTCTTCG TGCCTTCCCT GCTGTGTGGA GCAGCTTTTG GACGTTTAGT TGCCAATGTC 
CTGAAAAGCT ACATTGGACT GGGCCACCTC TATTCTGGGA CCTTCGCCCT GATTGGTGCG 
GCAGCTTTCT TGGGTGGGGT TGTAAGAATG ACCATCAGCC TCACAGTCAT CCTGATTGAG 
TCCACAAATG AGATCACCTA TGGGCTTCCT ATTATGGTCA CTTTGATGGT GGCCAAGTGG 
ACTGGAGACT TTTTCAATAA GGGCATTTAC GACATCCACA TTGGGCTGAG AGGTGTGCCT 
CTTCTGGAGT GGGAGACAGA GGTGGAGATG GACAGGCTGA GAGCCAGCGA CATCATGGAG 
CCCAACTTGA CGTATGTCTA CCCACATACT CGTATCCAGT CTCTGGTGAG CATCCTGCGT 
ACTACAGTCC ACCATGCCTT CCCAGTGGTC ACAGAGAATC GCGGCAACGA GAAGGAGTTC 
ATGAAAGGCA ACCAGCTCAT AAGCAACAAC ATTAAGTTCA AGAAGTCCAG CATCCTCACC 
CGTGCTGGTG AGCAGCGCAA GCGGGGCCAG TCCATGAAGT CTTACCCTTC CAGCGAGCTG 
CGCAACGTGT GTGATGAGCA TGTGGCTTCT GAGGAGCCAG CAGAGAAGGA GGACCTGCTA 
CAGCAGATGC TGGAGAGGAG ATACACTCCC TACCCCAACC TATACCCTGA CCAGTCCCCG 
AGTGAAGACT GGACCATGGA GGAGCGATTC CGTCCGCTGA CCTTCCATGG CCTCGTCCTG 
CGCTCCCAGC TCGTCACCCT GCTCGTCCGA GGCGTGTGTT ACTCGGAAAG TCAGTCCAGT 
GCCAGCCAAC CACGCCTTTC TTATGCTGAG ATGGCTGAGG ACTACCCGAG GTTTCCGGAC 
ATACATGACC TGGACCTCAC ACTGCTGAAT CCCCGCATGA TTGTGGACGT CACACCATAT 
ATGAATCCTT CACCATTTAC TGTCTCCCCC AACACCCACG TTTCTCAAGT TTTCAACCTG 
TTCAGAACCA TGGGCCTGCG CCACTTGCCG GTGGTGAATG CGGTGGGCGA GATCGTGGGG 
ATCATTACAC GACACAACCT GACGACTGAG TTCCTGCAGG CCCGGCTACG GCAGCATTAC 
CAGACCCTCT GA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq XP_006239439.1
CDS493..2904
Translation

Target ORF information:

RefSeq Version XM_006239377.3
Organism Rattus norvegicus(Norway rat)
Definition Rattus norvegicus chloride voltage-gated channel 6 (Clcn6), transcript variant X2, mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
 XM_006239377.3

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
1441
1501
1561
1621
1681
1741
1801
1861
1921
1981
2041
2101
2161
2221
2281
2341
2401
ATGGATAATA AGAAAGGGCG AAGACATGAG GCGGTGAAGT GGATGGTGGT GTTTGCCATT 
GGCGTCTGTA CTGGGCTGGT GGGCCTCTTC GTGGACTTTT CTGTGCGACT CTTCACCCAA 
CTCAAGTTCG GAGTGGTTCA AACGTCGGTG GAGGAATGCA GTCAGAAAGG CTGCCTTGCC 
CTGTCTCTCC TGGAACTCCT TGGCTTTAAC TTGACCTTTG TCTTCCTGGC AAGCCTTCTT 
GTCTTGATAG AGCCGGTGGC AGCAGGCTCT GGAATCCCAG AGATCAAGTG CTATCTGAAT 
GGTGTGAAAG TGCCAGGAAT TGTCCGGCTC CGAACCCTGC TCTGCAAAGT CTTTGGGGTG 
CTGTTCAGTG TGGCTGGAGG GCTCTTTGTG GGGAAAGAAG GCCCCATGAT CCACAGTGGT 
GCCGTGGTAG GAGCTGGCCT CCCTCAGTTT CAGAGCATCT CCTTAAGGAA GATCCAGTTT 
AACTTCCCCT ACTTCCGCAG CGACAGAGAC AAGCGTGACT TCGTATCAGC AGGGGCGGCT 
GCTGGAGTTG CTGCAGCTTT TGGGGCCCCT ATAGGGGGCA CCTTGTTCAG CCTGGAGGAG 
GGCTCGTCCT TCTGGAACCA GGGACTCACG TGGAAAGTGC TCTTCTGTTC CATGTCTGCC 
ACCTTCACCC TCAACTTCTT CCGCTCTGGG ATCCAGTTTG GAAGTTGGGG TGCCTTCCAG 
CTGCCTGGAC TGCTGAACTT TGGTGAATTT AAGTGCTCTG ACTCTGATAA AAAATGTCAT 
CTCTGGACAG CTATGGATTT GGGTTTCTTC GTCGTGATGG GGGTCATTGG GGGCCTCCTG 
GGAGCCACAT TCAACTGTCT GAACAAGAGG CTTGCAAAGT ACCGTATGCG CAACGTGCAC 
CCGAAACCTA AGCTCGTCAG GGTCTTAGAG AGCCTCTTGG TGTCCCTGGT GACGACTGTG 
GTGGTGTTTG TGGCCTCCAT GGTGTTGGGA GAATGCCGAC AGATGTCTTC CACGAGTCAA 
ACGGGTAATG GCTCATTCCA GCTCCAGGTC ACATCGGAAG ATGTGAATTC AACTATCAAG 
ACATTTTTCT GTCCCAATGA CACCTACAAC GACATGGCCA CACTCTTCTT CAACTCCCAG 
GAGTCTGCCA TCCTGCAGCT CTTCCATCAG GATGGGACTT TCAGCCCCGT CACCCTGGCC 
TTATTCTTCG CCCTCTATTT CCTGATGGCA TGCTGGACTT TCGGCACCTC TGTCCCCAGT 
GGCCTCTTCG TGCCTTCCCT GCTGTGTGGA GCAGCTTTTG GACGTTTAGT TGCCAATGTC 
CTGAAAAGCT ACATTGGACT GGGCCACCTC TATTCTGGGA CCTTCGCCCT GATTGGTGCG 
GCAGCTTTCT TGGGTGGGGT TGTAAGAATG ACCATCAGCC TCACAGTCAT CCTGATTGAG 
TCCACAAATG AGATCACCTA TGGGCTTCCT ATTATGGTCA CTTTGATGGT GGCCAAGTGG 
ACTGGAGACT TTTTCAATAA GGGCATTTAC GACATCCACA TTGGGCTGAG AGGTGTGCCT 
CTTCTGGAGT GGGAGACAGA GGTGGAGATG GACAGGCTGA GAGCCAGCGA CATCATGGAG 
CCCAACTTGA CGTATGTCTA CCCACATACT CGTATCCAGT CTCTGGTGAG CATCCTGCGT 
ACTACAGTCC ACCATGCCTT CCCAGTGGTC ACAGAGAATC GCGGCAACGA GAAGGAGTTC 
ATGAAAGGCA ACCAGCTCAT AAGCAACAAC ATTAAGTTCA AGAAGTCCAG CATCCTCACC 
CGTGCTGGTG AGCAGCGCAA GCGGGGCCAG TCCATGAAGT CTTACCCTTC CAGCGAGCTG 
CGCAACGTGT GTGATGAGCA TGTGGCTTCT GAGGAGCCAG CAGAGAAGGA GGACCTGCTA 
CAGCAGATGC TGGAGAGGAG ATACACTCCC TACCCCAACC TATACCCTGA CCAGTCCCCG 
AGTGAAGACT GGACCATGGA GGAGCGATTC CGTCCGCTGA CCTTCCATGG CCTCGTCCTG 
CGCTCCCAGC TCGTCACCCT GCTCGTCCGA GGCGTGTGTT ACTCGGAAAG TCAGTCCAGT 
GCCAGCCAAC CACGCCTTTC TTATGCTGAG ATGGCTGAGG ACTACCCGAG GTTTCCGGAC 
ATACATGACC TGGACCTCAC ACTGCTGAAT CCCCGCATGA TTGTGGACGT CACACCATAT 
ATGAATCCTT CACCATTTAC TGTCTCCCCC AACACCCACG TTTCTCAAGT TTTCAACCTG 
TTCAGAACCA TGGGCCTGCG CCACTTGCCG GTGGTGAATG CGGTGGGCGA GATCGTGGGG 
ATCATTACAC GACACAACCT GACGACTGAG TTCCTGCAGG CCCGGCTACG GCAGCATTAC 
CAGACCCTCT GA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

CloneID ORa28889
Clone ID Related Accession (Same CDS sequence) XM_006239377.3 , XM_006239378.3
Accession Version XM_006239378.3 Latest version! Documents for ORF clone product in default vector
Sequence Information ORF Nucleotide Sequence (Length: 2412bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ™ Seamless cloning technology
Insert Structure linear
Update Date 2016-07-25
Organism Rattus norvegicus(Norway rat)
Product chloride transport protein 6 isoform X1
Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005104.4) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jul 26, 2016 this sequence version replaced XM_006239378.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
1441
1501
1561
1621
1681
1741
1801
1861
1921
1981
2041
2101
2161
2221
2281
2341
2401
ATGGATAATA AGAAAGGGCG AAGACATGAG GCGGTGAAGT GGATGGTGGT GTTTGCCATT 
GGCGTCTGTA CTGGGCTGGT GGGCCTCTTC GTGGACTTTT CTGTGCGACT CTTCACCCAA 
CTCAAGTTCG GAGTGGTTCA AACGTCGGTG GAGGAATGCA GTCAGAAAGG CTGCCTTGCC 
CTGTCTCTCC TGGAACTCCT TGGCTTTAAC TTGACCTTTG TCTTCCTGGC AAGCCTTCTT 
GTCTTGATAG AGCCGGTGGC AGCAGGCTCT GGAATCCCAG AGATCAAGTG CTATCTGAAT 
GGTGTGAAAG TGCCAGGAAT TGTCCGGCTC CGAACCCTGC TCTGCAAAGT CTTTGGGGTG 
CTGTTCAGTG TGGCTGGAGG GCTCTTTGTG GGGAAAGAAG GCCCCATGAT CCACAGTGGT 
GCCGTGGTAG GAGCTGGCCT CCCTCAGTTT CAGAGCATCT CCTTAAGGAA GATCCAGTTT 
AACTTCCCCT ACTTCCGCAG CGACAGAGAC AAGCGTGACT TCGTATCAGC AGGGGCGGCT 
GCTGGAGTTG CTGCAGCTTT TGGGGCCCCT ATAGGGGGCA CCTTGTTCAG CCTGGAGGAG 
GGCTCGTCCT TCTGGAACCA GGGACTCACG TGGAAAGTGC TCTTCTGTTC CATGTCTGCC 
ACCTTCACCC TCAACTTCTT CCGCTCTGGG ATCCAGTTTG GAAGTTGGGG TGCCTTCCAG 
CTGCCTGGAC TGCTGAACTT TGGTGAATTT AAGTGCTCTG ACTCTGATAA AAAATGTCAT 
CTCTGGACAG CTATGGATTT GGGTTTCTTC GTCGTGATGG GGGTCATTGG GGGCCTCCTG 
GGAGCCACAT TCAACTGTCT GAACAAGAGG CTTGCAAAGT ACCGTATGCG CAACGTGCAC 
CCGAAACCTA AGCTCGTCAG GGTCTTAGAG AGCCTCTTGG TGTCCCTGGT GACGACTGTG 
GTGGTGTTTG TGGCCTCCAT GGTGTTGGGA GAATGCCGAC AGATGTCTTC CACGAGTCAA 
ACGGGTAATG GCTCATTCCA GCTCCAGGTC ACATCGGAAG ATGTGAATTC AACTATCAAG 
ACATTTTTCT GTCCCAATGA CACCTACAAC GACATGGCCA CACTCTTCTT CAACTCCCAG 
GAGTCTGCCA TCCTGCAGCT CTTCCATCAG GATGGGACTT TCAGCCCCGT CACCCTGGCC 
TTATTCTTCG CCCTCTATTT CCTGATGGCA TGCTGGACTT TCGGCACCTC TGTCCCCAGT 
GGCCTCTTCG TGCCTTCCCT GCTGTGTGGA GCAGCTTTTG GACGTTTAGT TGCCAATGTC 
CTGAAAAGCT ACATTGGACT GGGCCACCTC TATTCTGGGA CCTTCGCCCT GATTGGTGCG 
GCAGCTTTCT TGGGTGGGGT TGTAAGAATG ACCATCAGCC TCACAGTCAT CCTGATTGAG 
TCCACAAATG AGATCACCTA TGGGCTTCCT ATTATGGTCA CTTTGATGGT GGCCAAGTGG 
ACTGGAGACT TTTTCAATAA GGGCATTTAC GACATCCACA TTGGGCTGAG AGGTGTGCCT 
CTTCTGGAGT GGGAGACAGA GGTGGAGATG GACAGGCTGA GAGCCAGCGA CATCATGGAG 
CCCAACTTGA CGTATGTCTA CCCACATACT CGTATCCAGT CTCTGGTGAG CATCCTGCGT 
ACTACAGTCC ACCATGCCTT CCCAGTGGTC ACAGAGAATC GCGGCAACGA GAAGGAGTTC 
ATGAAAGGCA ACCAGCTCAT AAGCAACAAC ATTAAGTTCA AGAAGTCCAG CATCCTCACC 
CGTGCTGGTG AGCAGCGCAA GCGGGGCCAG TCCATGAAGT CTTACCCTTC CAGCGAGCTG 
CGCAACGTGT GTGATGAGCA TGTGGCTTCT GAGGAGCCAG CAGAGAAGGA GGACCTGCTA 
CAGCAGATGC TGGAGAGGAG ATACACTCCC TACCCCAACC TATACCCTGA CCAGTCCCCG 
AGTGAAGACT GGACCATGGA GGAGCGATTC CGTCCGCTGA CCTTCCATGG CCTCGTCCTG 
CGCTCCCAGC TCGTCACCCT GCTCGTCCGA GGCGTGTGTT ACTCGGAAAG TCAGTCCAGT 
GCCAGCCAAC CACGCCTTTC TTATGCTGAG ATGGCTGAGG ACTACCCGAG GTTTCCGGAC 
ATACATGACC TGGACCTCAC ACTGCTGAAT CCCCGCATGA TTGTGGACGT CACACCATAT 
ATGAATCCTT CACCATTTAC TGTCTCCCCC AACACCCACG TTTCTCAAGT TTTCAACCTG 
TTCAGAACCA TGGGCCTGCG CCACTTGCCG GTGGTGAATG CGGTGGGCGA GATCGTGGGG 
ATCATTACAC GACACAACCT GACGACTGAG TTCCTGCAGG CCCGGCTACG GCAGCATTAC 
CAGACCCTCT GA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq XP_006239440.1
CDS547..2958
Translation

Target ORF information:

RefSeq Version XM_006239378.3
Organism Rattus norvegicus(Norway rat)
Definition Rattus norvegicus chloride voltage-gated channel 6 (Clcn6), transcript variant X1, mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
 XM_006239378.3

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
1441
1501
1561
1621
1681
1741
1801
1861
1921
1981
2041
2101
2161
2221
2281
2341
2401
ATGGATAATA AGAAAGGGCG AAGACATGAG GCGGTGAAGT GGATGGTGGT GTTTGCCATT 
GGCGTCTGTA CTGGGCTGGT GGGCCTCTTC GTGGACTTTT CTGTGCGACT CTTCACCCAA 
CTCAAGTTCG GAGTGGTTCA AACGTCGGTG GAGGAATGCA GTCAGAAAGG CTGCCTTGCC 
CTGTCTCTCC TGGAACTCCT TGGCTTTAAC TTGACCTTTG TCTTCCTGGC AAGCCTTCTT 
GTCTTGATAG AGCCGGTGGC AGCAGGCTCT GGAATCCCAG AGATCAAGTG CTATCTGAAT 
GGTGTGAAAG TGCCAGGAAT TGTCCGGCTC CGAACCCTGC TCTGCAAAGT CTTTGGGGTG 
CTGTTCAGTG TGGCTGGAGG GCTCTTTGTG GGGAAAGAAG GCCCCATGAT CCACAGTGGT 
GCCGTGGTAG GAGCTGGCCT CCCTCAGTTT CAGAGCATCT CCTTAAGGAA GATCCAGTTT 
AACTTCCCCT ACTTCCGCAG CGACAGAGAC AAGCGTGACT TCGTATCAGC AGGGGCGGCT 
GCTGGAGTTG CTGCAGCTTT TGGGGCCCCT ATAGGGGGCA CCTTGTTCAG CCTGGAGGAG 
GGCTCGTCCT TCTGGAACCA GGGACTCACG TGGAAAGTGC TCTTCTGTTC CATGTCTGCC 
ACCTTCACCC TCAACTTCTT CCGCTCTGGG ATCCAGTTTG GAAGTTGGGG TGCCTTCCAG 
CTGCCTGGAC TGCTGAACTT TGGTGAATTT AAGTGCTCTG ACTCTGATAA AAAATGTCAT 
CTCTGGACAG CTATGGATTT GGGTTTCTTC GTCGTGATGG GGGTCATTGG GGGCCTCCTG 
GGAGCCACAT TCAACTGTCT GAACAAGAGG CTTGCAAAGT ACCGTATGCG CAACGTGCAC 
CCGAAACCTA AGCTCGTCAG GGTCTTAGAG AGCCTCTTGG TGTCCCTGGT GACGACTGTG 
GTGGTGTTTG TGGCCTCCAT GGTGTTGGGA GAATGCCGAC AGATGTCTTC CACGAGTCAA 
ACGGGTAATG GCTCATTCCA GCTCCAGGTC ACATCGGAAG ATGTGAATTC AACTATCAAG 
ACATTTTTCT GTCCCAATGA CACCTACAAC GACATGGCCA CACTCTTCTT CAACTCCCAG 
GAGTCTGCCA TCCTGCAGCT CTTCCATCAG GATGGGACTT TCAGCCCCGT CACCCTGGCC 
TTATTCTTCG CCCTCTATTT CCTGATGGCA TGCTGGACTT TCGGCACCTC TGTCCCCAGT 
GGCCTCTTCG TGCCTTCCCT GCTGTGTGGA GCAGCTTTTG GACGTTTAGT TGCCAATGTC 
CTGAAAAGCT ACATTGGACT GGGCCACCTC TATTCTGGGA CCTTCGCCCT GATTGGTGCG 
GCAGCTTTCT TGGGTGGGGT TGTAAGAATG ACCATCAGCC TCACAGTCAT CCTGATTGAG 
TCCACAAATG AGATCACCTA TGGGCTTCCT ATTATGGTCA CTTTGATGGT GGCCAAGTGG 
ACTGGAGACT TTTTCAATAA GGGCATTTAC GACATCCACA TTGGGCTGAG AGGTGTGCCT 
CTTCTGGAGT GGGAGACAGA GGTGGAGATG GACAGGCTGA GAGCCAGCGA CATCATGGAG 
CCCAACTTGA CGTATGTCTA CCCACATACT CGTATCCAGT CTCTGGTGAG CATCCTGCGT 
ACTACAGTCC ACCATGCCTT CCCAGTGGTC ACAGAGAATC GCGGCAACGA GAAGGAGTTC 
ATGAAAGGCA ACCAGCTCAT AAGCAACAAC ATTAAGTTCA AGAAGTCCAG CATCCTCACC 
CGTGCTGGTG AGCAGCGCAA GCGGGGCCAG TCCATGAAGT CTTACCCTTC CAGCGAGCTG 
CGCAACGTGT GTGATGAGCA TGTGGCTTCT GAGGAGCCAG CAGAGAAGGA GGACCTGCTA 
CAGCAGATGC TGGAGAGGAG ATACACTCCC TACCCCAACC TATACCCTGA CCAGTCCCCG 
AGTGAAGACT GGACCATGGA GGAGCGATTC CGTCCGCTGA CCTTCCATGG CCTCGTCCTG 
CGCTCCCAGC TCGTCACCCT GCTCGTCCGA GGCGTGTGTT ACTCGGAAAG TCAGTCCAGT 
GCCAGCCAAC CACGCCTTTC TTATGCTGAG ATGGCTGAGG ACTACCCGAG GTTTCCGGAC 
ATACATGACC TGGACCTCAC ACTGCTGAAT CCCCGCATGA TTGTGGACGT CACACCATAT 
ATGAATCCTT CACCATTTAC TGTCTCCCCC AACACCCACG TTTCTCAAGT TTTCAACCTG 
TTCAGAACCA TGGGCCTGCG CCACTTGCCG GTGGTGAATG CGGTGGGCGA GATCGTGGGG 
ATCATTACAC GACACAACCT GACGACTGAG TTCCTGCAGG CCCGGCTACG GCAGCATTAC 
CAGACCCTCT GA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

PubMed

book

The rs3737964 single-nucleotide polymorphism of the chloride channel-6 gene as a risk factor for coronary heart disease.
Molecular genetics & genomic medicine3(6)537-42(2015 Nov)
Zhang L,Zhang T,Xiang Z,Lu S


book

Identifying multiple causative genes at a single GWAS locus.
Genome research23(12)1996-2002(2013 Dec)
Flister MJ,Tsaih SW,O'Meara CC,Endres B,Hoffman MJ,Geurts AM,Dwinell MR,Lazar J,Jacob HJ,Moreno C


book

Integral and associated lysosomal membrane proteins.
Traffic (Copenhagen, Denmark)8(12)1676-86(2007 Dec)
Schr?der B,Wrocklage C,Pan C,J?ger R,K?sters B,Sch?fer H,Els?sser HP,Mann M,Hasilik A


book

Chloride channels and the reactions of cells to topography.
European cells & materials249-61(2001 Dec)
Tobasnick G,Curtis AS