Gene Symbol | Usp39 |
Entrez Gene ID | 297336 |
Full Name | ubiquitin specific peptidase 39 |
General protein information |
|
Gene Type | protein-coding |
Organism | Rattus norvegicus(Norway rat) |
Genome |
ORF » Species Summary » Rattus norvegicus » Usp39 cDNA ORF clone
Gene Symbol | Usp39 |
Entrez Gene ID | 297336 |
Full Name | ubiquitin specific peptidase 39 |
General protein information |
|
Gene Type | protein-coding |
Organism | Rattus norvegicus(Norway rat) |
Genome |
mRNA | Protein | Name |
---|---|---|
XM_006236659.3 | XP_006236721.1 | U4/U6.U5 tri-snRNP-associated protein 2 isoform X1 |
NM_001106597.1 | NP_001100067.1 | U4/U6.U5 tri-snRNP-associated protein 2 |
Homo sapiens (human) | USP39 | NP_006581.2 |
Canis lupus familiaris (dog) | USP39 | XP_532977.1 |
Bos taurus (cattle) | USP39 | NP_001094615.1 |
Caenorhabditis elegans (roundworm) | F09D1.1 | NP_494298.1 |
Rattus norvegicus (Norway rat) | Usp39 | NP_001100067.1 |
Gallus gallus (chicken) | USP39 | XP_003643514.2 |
Magnaporthe oryzae (rice blast fungus) | MGG_08169 | XP_003715141.1 |
Danio rerio (zebrafish) | usp39 | NP_001073539.1 |
Neurospora crassa | NCU09547 | XP_958766.2 |
Arabidopsis thaliana (thale cress) | AT4G22350 | NP_193966.2 |
Mus musculus (house mouse) | Usp39 | NP_613058.1 |
Drosophila melanogaster (fruit fly) | CG7288 | NP_573334.1 |
Anopheles gambiae (African malaria mosquito) | AgaP_AGAP008381 | XP_317070.4 |
Schizosaccharomyces pombe (fission yeast) | ubp10 | NP_595305.1 |
Arabidopsis thaliana (thale cress) | AT4G22285 | NP_001078426.1 |
Pan troglodytes (chimpanzee) | USP39 | XP_515591.2 |
USP39 | XP_001089375.1 | |
Oryza sativa (rice) | Os09g0407900 | NP_001063139.1 |
Xenopus tropicalis (tropical clawed frog) | usp39 | XP_002932588.1 |
Molecular architecture of the human U4/U6.U5 tri-snRNP.
Agafonov DE, Kastner B, Dybkov O, Hofele RV, Liu WT, Urlaub H, L?hrmann R, Stark H
Science (New York, N.Y.)351(6280)1416-20(2016 Mar)
Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences.
Strausberg RL, Feingold EA, Grouse LH, Derge JG, Klausner RD, Collins FS, Wagner L, Shenmen CM, Schuler GD, Altschul SF, Zeeberg B, Buetow KH, Schaefer CF, Bhat NK, Hopkins RF, Jordan H, Moore T, Max SI, Wang J, Hsieh F, Diatchenko L, Marusina K, Farmer AA, Rubin GM, Hong L, Stapleton M, Soares MB, Bonaldo MF, Casavant TL, Scheetz TE, Brownstein MJ, Usdin TB, Toshiyuki S, Carninci P, Prange C, Raha SS, Loquellano NA, Peters GJ, Abramson RD, Mullahy SJ, Bosak SA, McEwan PJ, McKernan KJ, Malek JA, Gunaratne PH, Richards S, Worley KC, Hale S, Garcia AM, Gay LJ, Hulyk SW, Villalon DK, Muzny DM, Sodergren EJ, Lu X, Gibbs RA, Fahey J, Helton E, Ketteman M, Madan A, Rodrigues S, Sanchez A, Whiting M, Madan A, Young AC, Shevchenko Y, Bouffard GG, Blakesley RW, Touchman JW, Green ED, Dickson MC, Rodriguez AC, Grimwood J, Schmutz J, Myers RM, Butterfield YS, Krzywinski MI, Skalska U, Smailus DE, Schnerch A, Schein JE, Jones SJ, Marra MA,
Proceedings of the National Academy of Sciences of the United States of America99(26)16899-903(2002 Dec)
The 65 and 110 kDa SR-related proteins of the U4/U6.U5 tri-snRNP are essential for the assembly of mature spliceosomes.
Makarova OV, Makarov EM, L?hrmann R
The EMBO journal20(10)2553-63(2001 May)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following Usp39 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the Usp39 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | ORa41459 | |
Clone ID Related Accession (Same CDS sequence) | NM_001106597.1 | |
Accession Version | NM_001106597.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1707bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-04-18 | |
Organism | Rattus norvegicus(Norway rat) | |
Product | U4/U6.U5 tri-snRNP-associated protein 2 | |
Comment | Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from CH473957.1. On or before Oct 4, 2007 this sequence version replaced XM_001063779.1, XM_216173.4. |
1 | ATGTCTAGCC GGTCCAAGCG GCAGTCTCAT GGTTCTACCC GTGGGAAGCG CGAGTCCGAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001100067.1 |
CDS | 30..1736 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001106597.1 |
1 | ATGTCTAGCC GGTCCAAGCG GCAGTCTCAT GGTTCTACCC GTGGGAAGCG CGAGTCCGAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ORa27350 | |
Clone ID Related Accession (Same CDS sequence) | XM_006236659.3 | |
Accession Version | XM_006236659.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1695bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-07-25 | |
Organism | Rattus norvegicus(Norway rat) | |
Product | U4/U6.U5 tri-snRNP-associated protein 2 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005103.4) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Jul 26, 2016 this sequence version replaced XM_006236659.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGTCTAGCC GGTCCAAGCG GCAGTCTCAT GGTTCTACCC GTGGGAAGCG CGAGTCCGAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_006236721.1 |
CDS | 1143..2837 |
Translation |
Target ORF information:
Target ORF information:
|
XM_006236659.3 |
1 | ATGTCTAGCC GGTCCAAGCG GCAGTCTCAT GGTTCTACCC GTGGGAAGCG CGAGTCCGAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Molecular architecture of the human U4/U6.U5 tri-snRNP. |
Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. |
The 65 and 110 kDa SR-related proteins of the U4/U6.U5 tri-snRNP are essential for the assembly of mature spliceosomes. |