Gene Symbol
Ubp1
Entrez Gene ID
301038
Full Name
upstream binding protein 1
Synonyms
RGD1564700
General protein information
Preferred Namesupstream binding protein 1
Namesupstream-binding protein 1 upstream binding protein 1 (LBP-1a)
Gene Type
protein-coding
Organism
Rattus norvegicus(Norway rat)
Genome
Chromosome: 8
Map Location: 8q32
Rattus norvegicus (Norway rat)
Ubp1
NP_001178748.1
Canis lupus familiaris (dog)
UBP1
XP_005634259.1
Danio rerio (zebrafish)
ubp1
NP_001108046.1
UBP1
XP_001099731.1
Bos taurus (cattle)
UBP1
XP_003587658.1
Mus musculus (house mouse)
Ubp1
NP_001076788.1
Pan troglodytes (chimpanzee)
UBP1
XP_001168549.2
Homo sapiens (human)
UBP1
NP_001121633.1
Gallus gallus (chicken)
UBP1
XP_426018.3
Anopheles gambiae (African malaria mosquito)
AgaP_AGAP007065
XP_308698.4
Related articles in PubMed
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following Ubp1 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the Ubp1 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+ /C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID
ORa25641
Clone ID Related Accession (Same CDS sequence)
NM_001191819.2
, NM_001191819.1
Accession Version
NM_001191819.2 Latest version!
Documents for ORF clone product in default vector
Sequence Information
ORF Nucleotide Sequence (Length: 1623bp)
Protein sequence
SNP
Vector
pcDNA3.1+ /C-(K)DYK or customized vector
User Manual
Clone information
Clone Map
MSDS
Tag on pcDNA3.1+ /C-(K)DYK
C terminal DYKDDDDK tags
ORF Insert Method
CloneEZ™ Seamless cloning technology
Insert Structure
linear
Update Date
2018-05-31
Organism
Rattus norvegicus(Norway rat)
Product
upstream-binding protein 1
Comment
Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from FN798828.1, FM064075.1, AABR07071565.1, BQ780402.1 and FM039161.1. On Aug 5, 2017 this sequence version replaced NM_001191819.1.
Sequence Note: This RefSeq record was created from transcript and genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments.
##Evidence-Data-START##
RNAseq introns :: single sample supports all introns SAMD00052296, SAMD00052297 [ECO:0000348]
##Evidence-Data-END##
##RefSeq-Attributes-START##
inferred exon combination :: based on alignments, homology
##RefSeq-Attributes-END##
COMPLETENESS: complete on the 3' end.
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021 1081 1141 1201 1261 1321 1381 1441 1501 1561 1621 ATGGCCTGGG TGCTCAGTAT GGACGAGGTG ATCGAGTCCG GGCTGGTGCA CGACTTCGAC TCCAGCCTGT CCGGCATCGG ACAAGAGCTG GGCGCTGGCG CCTACAGCAT GAGTGATGTG TTGGCGCTAC CCATTTTCAA ACAAGAAGAC TCCAGCCTTT CTTTGGAGGC TGAGGCCAAG CACCCCCCAT TCCAGTACGT AATGTGTGCT GCAACCTCAC CAGCCGTGAA GCTGCATGAT GAGACGCTCA CTTACTTGAA CCAAGGCCAG TCTTATGAAA TTCGGATGCT GGATAATCGC AAAATGGGAG ATGTGCCTGA GATCAGTGGG AAGTTGGTGA AGAGCATCAT AAGAGTGGTG TTCCATGACA GACGGCTACA GTACACGGAG CATCAGCAGC TTGAAGGCTG GAAGTGGAAT CGCCCAGGAG ACCGGCTTCT TGATTTAGAT ATTCCAATGT CTGTGGGAAT AATTGACACA AGAACAAATC CAAGCCAGTT AAATGCAGTT GAATTTCTGT GGGACCCTGC AAAGCGCACA TCTGCCTTCA TTCAGGTACA CTGTATCAGC ACCGAATTCA CCCCACGTAA GCATGGAGGT GAAAAAGGAG TGCCTTTTAG GATCCAGGTT GACACCTTTA AGCAGAATGA AAACGGGGAA TACACAGATC ATCTTCACTC AGCTAGCTGC CAAATCAAAG TCTTTAAGCC TAAAGGTGCG GACAGGAAAC AAAAAAATGA CCGAGAAAAG ATGGAGAAGA GAACAGCTCA TGAAAAAGAA AAGTATCAGC CGTCTTACGA CACCACCATC CTCACAGAGA TGAGGCTTGA GCCTATAATT GAAGATGCAG TTGAACATGA GCAGAAAAAG TCCAGCAAGC GGACTTTGCC AGCAGACTAC GGTGATTCTC TGGCAAAGCG AGGCAGTTGC TCTCCATGGC CCGACACCCC TACAGCCTAT GTGAATAACA GCCCTTCCCC AGCGCCCACT TTCACCTCCT CACAGCAGAG CACGTGCAGT GTCCCAGACA GCAATTCTTC ATCCCCAAAT CACCAGGGAG ATGGAGTTGC ACAGGCATCC GGGGAGCAAA TTCAGCCTTC AGCTACAACC CAGGAAACAC AGCAGTGGCT GCTCAAAAAC AGGTTCTCTT CCTACACAAG ACTGTTCTCT AATTTTTCAG GTGCCGACTT ATTAAAGCTG ACAAAGGAGG ATTTAGTTCA GATTTGTGGT GCAGCCGATG GAATTAGGCT CTATAATTCC CTGAAGTCAA GGTCGGTTAG GCCCCGCTTA ACCATCTATG TCTGCCAGGA GCAGCCGAGC AGTGCTGTGC CACAAGGGCA GCCACAAGCT GCAGGCAGTG GAGGTGAAGG TGGCGCTGGG ACGCCCTGCG TTTATCATGC AATCTACTTG GAAGAAATGG TTGCTTCAGA AGTTGCTCGA AAACTTGCCT CGGTGTTTAA TATTCCTTTC CACCAAATTA ACCAGGTTTA CAGACAGGGC CCCACTGGTA TCCACATTCT TGTTAGTGAC CAGATGGTTC AGAACTTTCA AGATGAGAGT TGTTTTTTAT TCTCTACAGT AAAAGCTGAA AATAATGATG GTATTCACAT AATTTTGAAG TGA
The stop codons will be deleted if pcDNA3.1+ /C-(K)DYK vector is selected.
RefSeq
NP_001178748.1
CDS 191..1813
Translation
Target ORF information:
RefSeq Version NM_001191819.2
Organism Rattus norvegicus(Norway rat)
Definition Rattus norvegicus upstream binding protein 1 (Ubp1), mRNA.
Target ORF information:
Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+ /C-(K)DYK
NM_001191819.2
ORF Insert Sequence:
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021 1081 1141 1201 1261 1321 1381 1441 1501 1561 1621 ATGGCCTGGG TGCTCAGTAT GGACGAGGTG ATCGAGTCCG GGCTGGTGCA CGACTTCGAC TCCAGCCTGT CCGGCATCGG ACAAGAGCTG GGCGCTGGCG CCTACAGCAT GAGTGATGTG TTGGCGCTAC CCATTTTCAA ACAAGAAGAC TCCAGCCTTT CTTTGGAGGC TGAGGCCAAG CACCCCCCAT TCCAGTACGT AATGTGTGCT GCAACCTCAC CAGCCGTGAA GCTGCATGAT GAGACGCTCA CTTACTTGAA CCAAGGCCAG TCTTATGAAA TTCGGATGCT GGATAATCGC AAAATGGGAG ATGTGCCTGA GATCAGTGGG AAGTTGGTGA AGAGCATCAT AAGAGTGGTG TTCCATGACA GACGGCTACA GTACACGGAG CATCAGCAGC TTGAAGGCTG GAAGTGGAAT CGCCCAGGAG ACCGGCTTCT TGATTTAGAT ATTCCAATGT CTGTGGGAAT AATTGACACA AGAACAAATC CAAGCCAGTT AAATGCAGTT GAATTTCTGT GGGACCCTGC AAAGCGCACA TCTGCCTTCA TTCAGGTACA CTGTATCAGC ACCGAATTCA CCCCACGTAA GCATGGAGGT GAAAAAGGAG TGCCTTTTAG GATCCAGGTT GACACCTTTA AGCAGAATGA AAACGGGGAA TACACAGATC ATCTTCACTC AGCTAGCTGC CAAATCAAAG TCTTTAAGCC TAAAGGTGCG GACAGGAAAC AAAAAAATGA CCGAGAAAAG ATGGAGAAGA GAACAGCTCA TGAAAAAGAA AAGTATCAGC CGTCTTACGA CACCACCATC CTCACAGAGA TGAGGCTTGA GCCTATAATT GAAGATGCAG TTGAACATGA GCAGAAAAAG TCCAGCAAGC GGACTTTGCC AGCAGACTAC GGTGATTCTC TGGCAAAGCG AGGCAGTTGC TCTCCATGGC CCGACACCCC TACAGCCTAT GTGAATAACA GCCCTTCCCC AGCGCCCACT TTCACCTCCT CACAGCAGAG CACGTGCAGT GTCCCAGACA GCAATTCTTC ATCCCCAAAT CACCAGGGAG ATGGAGTTGC ACAGGCATCC GGGGAGCAAA TTCAGCCTTC AGCTACAACC CAGGAAACAC AGCAGTGGCT GCTCAAAAAC AGGTTCTCTT CCTACACAAG ACTGTTCTCT AATTTTTCAG GTGCCGACTT ATTAAAGCTG ACAAAGGAGG ATTTAGTTCA GATTTGTGGT GCAGCCGATG GAATTAGGCT CTATAATTCC CTGAAGTCAA GGTCGGTTAG GCCCCGCTTA ACCATCTATG TCTGCCAGGA GCAGCCGAGC AGTGCTGTGC CACAAGGGCA GCCACAAGCT GCAGGCAGTG GAGGTGAAGG TGGCGCTGGG ACGCCCTGCG TTTATCATGC AATCTACTTG GAAGAAATGG TTGCTTCAGA AGTTGCTCGA AAACTTGCCT CGGTGTTTAA TATTCCTTTC CACCAAATTA ACCAGGTTTA CAGACAGGGC CCCACTGGTA TCCACATTCT TGTTAGTGAC CAGATGGTTC AGAACTTTCA AGATGAGAGT TGTTTTTTAT TCTCTACAGT AAAAGCTGAA AATAATGATG GTATTCACAT AATTTTGAAG TGA
The stop codons will be deleted if pcDNA3.1+ /C-(K)DYK vector is selected.
CloneID
ORa25641
Clone ID Related Accession (Same CDS sequence)
NM_001191819.2
, NM_001191819.1
Accession Version
NM_001191819.1
Documents for ORF clone product in default vector
Sequence Information
ORF Nucleotide Sequence (Length: 1623bp)
Protein sequence
SNP
Vector
pcDNA3.1+ /C-(K)DYK or customized vector
User Manual
Clone information
Clone Map
MSDS
Tag on pcDNA3.1+ /C-(K)DYK
C terminal DYKDDDDK tags
ORF Insert Method
CloneEZ™ Seamless cloning technology
Insert Structure
linear
Update Date
2010-07-17
Organism
Rattus norvegicus(Norway rat)
Product
upstream-binding protein 1
Comment
PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from AABR03065851.1 and AABR03062296.1. On Jul 17, 2010 this sequence version replaced XM_238562.5.
Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments.
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021 1081 1141 1201 1261 1321 1381 1441 1501 1561 1621 ATGGCCTGGG TGCTCAGTAT GGACGAGGTG ATCGAGTCCG GGCTGGTGCA CGACTTCGAC TCCAGCCTGT CCGGCATCGG ACAAGAGCTG GGCGCTGGCG CCTACAGCAT GAGTGATGTG TTGGCGCTAC CCATTTTCAA ACAAGAAGAC TCCAGCCTTT CTTTGGAGGC TGAGGCCAAG CACCCCCCAT TCCAGTACGT AATGTGTGCT GCAACCTCAC CAGCCGTGAA GCTGCATGAT GAGACGCTCA CTTACTTGAA CCAAGGCCAG TCTTATGAAA TTCGGATGCT GGATAATCGC AAAATGGGAG ATGTGCCTGA GATCAGTGGG AAGTTGGTGA AGAGCATCAT AAGAGTGGTG TTCCATGACA GACGGCTACA GTACACGGAG CATCAGCAGC TTGAAGGCTG GAAGTGGAAT CGCCCAGGAG ACCGGCTTCT TGATTTAGAT ATTCCAATGT CTGTGGGAAT AATTGACACA AGAACAAATC CAAGCCAGTT AAATGCAGTT GAATTTCTGT GGGACCCTGC AAAGCGCACA TCTGCCTTCA TTCAGGTACA CTGTATCAGC ACCGAATTCA CCCCACGTAA GCATGGAGGT GAAAAAGGAG TGCCTTTTAG GATCCAGGTT GACACCTTTA AGCAGAATGA AAACGGGGAA TACACAGATC ATCTTCACTC AGCTAGCTGC CAAATCAAAG TCTTTAAGCC TAAAGGTGCG GACAGGAAAC AAAAAAATGA CCGAGAAAAG ATGGAGAAGA GAACAGCTCA TGAAAAAGAA AAGTATCAGC CGTCTTACGA CACCACCATC CTCACAGAGA TGAGGCTTGA GCCTATAATT GAAGATGCAG TTGAACATGA GCAGAAAAAG TCCAGCAAGC GGACTTTGCC AGCAGACTAC GGTGATTCTC TGGCAAAGCG AGGCAGTTGC TCTCCATGGC CCGACACCCC TACAGCCTAT GTGAATAACA GCCCTTCCCC AGCGCCCACT TTCACCTCCT CACAGCAGAG CACGTGCAGT GTCCCAGACA GCAATTCTTC ATCCCCAAAT CACCAGGGAG ATGGAGTTGC ACAGGCATCC GGGGAGCAAA TTCAGCCTTC AGCTACAACC CAGGAAACAC AGCAGTGGCT GCTCAAAAAC AGGTTCTCTT CCTACACAAG ACTGTTCTCT AATTTTTCAG GTGCCGACTT ATTAAAGCTG ACAAAGGAGG ATTTAGTTCA GATTTGTGGT GCAGCCGATG GAATTAGGCT CTATAATTCC CTGAAGTCAA GGTCGGTTAG GCCCCGCTTA ACCATCTATG TCTGCCAGGA GCAGCCGAGC AGTGCTGTGC CACAAGGGCA GCCACAAGCT GCAGGCAGTG GAGGTGAAGG TGGCGCTGGG ACGCCCTGCG TTTATCATGC AATCTACTTG GAAGAAATGG TTGCTTCAGA AGTTGCTCGA AAACTTGCCT CGGTGTTTAA TATTCCTTTC CACCAAATTA ACCAGGTTTA CAGACAGGGC CCCACTGGTA TCCACATTCT TGTTAGTGAC CAGATGGTTC AGAACTTTCA AGATGAGAGT TGTTTTTTAT TCTCTACAGT AAAAGCTGAA AATAATGATG GTATTCACAT AATTTTGAAG TGA
The stop codons will be deleted if pcDNA3.1+ /C-(K)DYK vector is selected.
RefSeq
NP_001178748.1
CDS 202..1824
Translation
Target ORF information:
RefSeq Version NM_001191819.1
Organism Rattus norvegicus(Norway rat)
Definition Rattus norvegicus upstream binding protein 1 (LBP-1a) (Ubp1), mRNA.
Target ORF information:
Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+ /C-(K)DYK
NM_001191819.1
ORF Insert Sequence:
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021 1081 1141 1201 1261 1321 1381 1441 1501 1561 1621 ATGGCCTGGG TGCTCAGTAT GGACGAGGTG ATCGAGTCCG GGCTGGTGCA CGACTTCGAC TCCAGCCTGT CCGGCATCGG ACAAGAGCTG GGCGCTGGCG CCTACAGCAT GAGTGATGTG TTGGCGCTAC CCATTTTCAA ACAAGAAGAC TCCAGCCTTT CTTTGGAGGC TGAGGCCAAG CACCCCCCAT TCCAGTACGT AATGTGTGCT GCAACCTCAC CAGCCGTGAA GCTGCATGAT GAGACGCTCA CTTACTTGAA CCAAGGCCAG TCTTATGAAA TTCGGATGCT GGATAATCGC AAAATGGGAG ATGTGCCTGA GATCAGTGGG AAGTTGGTGA AGAGCATCAT AAGAGTGGTG TTCCATGACA GACGGCTACA GTACACGGAG CATCAGCAGC TTGAAGGCTG GAAGTGGAAT CGCCCAGGAG ACCGGCTTCT TGATTTAGAT ATTCCAATGT CTGTGGGAAT AATTGACACA AGAACAAATC CAAGCCAGTT AAATGCAGTT GAATTTCTGT GGGACCCTGC AAAGCGCACA TCTGCCTTCA TTCAGGTACA CTGTATCAGC ACCGAATTCA CCCCACGTAA GCATGGAGGT GAAAAAGGAG TGCCTTTTAG GATCCAGGTT GACACCTTTA AGCAGAATGA AAACGGGGAA TACACAGATC ATCTTCACTC AGCTAGCTGC CAAATCAAAG TCTTTAAGCC TAAAGGTGCG GACAGGAAAC AAAAAAATGA CCGAGAAAAG ATGGAGAAGA GAACAGCTCA TGAAAAAGAA AAGTATCAGC CGTCTTACGA CACCACCATC CTCACAGAGA TGAGGCTTGA GCCTATAATT GAAGATGCAG TTGAACATGA GCAGAAAAAG TCCAGCAAGC GGACTTTGCC AGCAGACTAC GGTGATTCTC TGGCAAAGCG AGGCAGTTGC TCTCCATGGC CCGACACCCC TACAGCCTAT GTGAATAACA GCCCTTCCCC AGCGCCCACT TTCACCTCCT CACAGCAGAG CACGTGCAGT GTCCCAGACA GCAATTCTTC ATCCCCAAAT CACCAGGGAG ATGGAGTTGC ACAGGCATCC GGGGAGCAAA TTCAGCCTTC AGCTACAACC CAGGAAACAC AGCAGTGGCT GCTCAAAAAC AGGTTCTCTT CCTACACAAG ACTGTTCTCT AATTTTTCAG GTGCCGACTT ATTAAAGCTG ACAAAGGAGG ATTTAGTTCA GATTTGTGGT GCAGCCGATG GAATTAGGCT CTATAATTCC CTGAAGTCAA GGTCGGTTAG GCCCCGCTTA ACCATCTATG TCTGCCAGGA GCAGCCGAGC AGTGCTGTGC CACAAGGGCA GCCACAAGCT GCAGGCAGTG GAGGTGAAGG TGGCGCTGGG ACGCCCTGCG TTTATCATGC AATCTACTTG GAAGAAATGG TTGCTTCAGA AGTTGCTCGA AAACTTGCCT CGGTGTTTAA TATTCCTTTC CACCAAATTA ACCAGGTTTA CAGACAGGGC CCCACTGGTA TCCACATTCT TGTTAGTGAC CAGATGGTTC AGAACTTTCA AGATGAGAGT TGTTTTTTAT TCTCTACAGT AAAAGCTGAA AATAATGATG GTATTCACAT AATTTTGAAG TGA
The stop codons will be deleted if pcDNA3.1+ /C-(K)DYK vector is selected.
CloneID
ORa31698
Clone ID Related Accession (Same CDS sequence)
XM_006243962.1
Accession Version
XM_006243962.1 Latest version!
Documents for ORF clone product in default vector
Sequence Information
ORF Nucleotide Sequence (Length: 1515bp)
Protein sequence
SNP
Vector
pcDNA3.1+ /C-(K)DYK or customized vector
User Manual
Clone information
Clone Map
MSDS
Tag on pcDNA3.1+ /C-(K)DYK
C terminal DYKDDDDK tags
ORF Insert Method
CloneEZ™ Seamless cloning technology
Insert Structure
linear
Update Date
2016-07-25
Organism
Rattus norvegicus(Norway rat)
Product
upstream-binding protein 1 isoform X3
Comment
Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005107.4) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Status :: Full annotation
Annotation Version :: Rattus norvegicus Annotation Release 106
Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline
Annotation Software Version :: 7.1
Annotation Method :: Best-placed RefSeq; Gnomon
Features Annotated :: Gene; mRNA; CDS; ncRNA
##Genome-Annotation-Data-END##
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021 1081 1141 1201 1261 1321 1381 1441 1501 ATGGCCTGGG TGCTCAGTAT GGACGAGGTG ATCGAGTCCG GGCTGGTGCA CGACTTCGAC TCCAGCCTGT CCGGCATCGG ACAAGAGCTG GGCGCTGGCG CCTACAGCAT GAGTGATGTG TTGGCGCTAC CCATTTTCAA ACAAGAAGAC TCCAGCCTTT CTTTGGAGGC TGAGGCCAAG CACCCCCCAT TCCAGTACGT AATGTGTGCT GCAACCTCAC CAGCCGTGAA GCTGCATGAT GAGACGCTCA CTTACTTGAA CCAAGGCCAG TCTTATGAAA TTCGGATGCT GGATAATCGC AAAATGGGAG ATGTGCCTGA GATCAGTGGG AAGTTGGTGA AGAGCATCAT AAGAGTGGTG TTCCATGACA GACGGCTACA GTACACGGAG CATCAGCAGC TTGAAGGCTG GAAGTGGAAT CGCCCAGGAG ACCGGCTTCT TGATTTAGAT ATTCCAATGT CTGTGGGAAT AATTGACACA AGAACAAATC CAAGCCAGTT AAATGCAGTT GAATTTCTGT GGGACCCTGC AAAGCGCACA TCTGCCTTCA TTCAGGTACA CTGTATCAGC ACCGAATTCA CCCCACGTAA GCATGGAGGT GAAAAAGGAG TGCCTTTTAG GATCCAGGTT GACACCTTTA AGCAGAATGA AAACGGGGAA TACACAGATC ATCTTCACTC AGCTAGCTGC CAAATCAAAG TCTTTAAGCC TAAAGGTGCG GACAGGAAAC AAAAAAATGA CCGAGAAAAG ATGGAGAAGA GAACAGCTCA TGAAAAAGAA AAGTATCAGC CGTCTTACGA CACCACCATC CTCACAGAGT GCTCTCCATG GCCCGACACC CCTACAGCCT ATGTGAATAA CAGCCCTTCC CCAGCGCCCA CTTTCACCTC CTCACAGCAG AGCACGTGCA GTGTCCCAGA CAGCAATTCT TCATCCCCAA ATCACCAGGG AGATGGAGTT GCACAGGCAT CCGGGGAGCA AATTCAGCCT TCAGCTACAA CCCAGGAAAC ACAGCAGTGG CTGCTCAAAA ACAGGTTCTC TTCCTACACA AGACTGTTCT CTAATTTTTC AGGTGCCGAC TTATTAAAGC TGACAAAGGA GGATTTAGTT CAGATTTGTG GTGCAGCCGA TGGAATTAGG CTCTATAATT CCCTGAAGTC AAGGTCGGTT AGGCCCCGCT TAACCATCTA TGTCTGCCAG GAGCAGCCGA GCAGTGCTGT GCCACAAGGG CAGCCACAAG CTGCAGGCAG TGGAGGTGAA GGTGGCGCTG GGACGCCCTG CGTTTATCAT GCAATCTACT TGGAAGAAAT GGTTGCTTCA GAAGTTGCTC GAAAACTTGC CTCGGTGTTT AATATTCCTT TCCACCAAAT TAACCAGGTT TACAGACAGG GCCCCACTGG TATCCACATT CTTGTTAGTG ACCAGATGGT TCAGAACTTT CAAGATGAGA GTTGTTTTTT ATTCTCTACA GTAAAAGCTG AAAATAATGA TGGTATTCAC ATAATTTTGA AGTGA
The stop codons will be deleted if pcDNA3.1+ /C-(K)DYK vector is selected.
RefSeq
XP_006244024.1
CDS 185..1699
Translation
Target ORF information:
RefSeq Version XM_006243962.1
Organism Rattus norvegicus(Norway rat)
Definition Rattus norvegicus upstream binding protein 1 (LBP-1a) (Ubp1), transcript variant X3, mRNA.
Target ORF information:
Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+ /C-(K)DYK
XM_006243962.1
ORF Insert Sequence:
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021 1081 1141 1201 1261 1321 1381 1441 1501 ATGGCCTGGG TGCTCAGTAT GGACGAGGTG ATCGAGTCCG GGCTGGTGCA CGACTTCGAC TCCAGCCTGT CCGGCATCGG ACAAGAGCTG GGCGCTGGCG CCTACAGCAT GAGTGATGTG TTGGCGCTAC CCATTTTCAA ACAAGAAGAC TCCAGCCTTT CTTTGGAGGC TGAGGCCAAG CACCCCCCAT TCCAGTACGT AATGTGTGCT GCAACCTCAC CAGCCGTGAA GCTGCATGAT GAGACGCTCA CTTACTTGAA CCAAGGCCAG TCTTATGAAA TTCGGATGCT GGATAATCGC AAAATGGGAG ATGTGCCTGA GATCAGTGGG AAGTTGGTGA AGAGCATCAT AAGAGTGGTG TTCCATGACA GACGGCTACA GTACACGGAG CATCAGCAGC TTGAAGGCTG GAAGTGGAAT CGCCCAGGAG ACCGGCTTCT TGATTTAGAT ATTCCAATGT CTGTGGGAAT AATTGACACA AGAACAAATC CAAGCCAGTT AAATGCAGTT GAATTTCTGT GGGACCCTGC AAAGCGCACA TCTGCCTTCA TTCAGGTACA CTGTATCAGC ACCGAATTCA CCCCACGTAA GCATGGAGGT GAAAAAGGAG TGCCTTTTAG GATCCAGGTT GACACCTTTA AGCAGAATGA AAACGGGGAA TACACAGATC ATCTTCACTC AGCTAGCTGC CAAATCAAAG TCTTTAAGCC TAAAGGTGCG GACAGGAAAC AAAAAAATGA CCGAGAAAAG ATGGAGAAGA GAACAGCTCA TGAAAAAGAA AAGTATCAGC CGTCTTACGA CACCACCATC CTCACAGAGT GCTCTCCATG GCCCGACACC CCTACAGCCT ATGTGAATAA CAGCCCTTCC CCAGCGCCCA CTTTCACCTC CTCACAGCAG AGCACGTGCA GTGTCCCAGA CAGCAATTCT TCATCCCCAA ATCACCAGGG AGATGGAGTT GCACAGGCAT CCGGGGAGCA AATTCAGCCT TCAGCTACAA CCCAGGAAAC ACAGCAGTGG CTGCTCAAAA ACAGGTTCTC TTCCTACACA AGACTGTTCT CTAATTTTTC AGGTGCCGAC TTATTAAAGC TGACAAAGGA GGATTTAGTT CAGATTTGTG GTGCAGCCGA TGGAATTAGG CTCTATAATT CCCTGAAGTC AAGGTCGGTT AGGCCCCGCT TAACCATCTA TGTCTGCCAG GAGCAGCCGA GCAGTGCTGT GCCACAAGGG CAGCCACAAG CTGCAGGCAG TGGAGGTGAA GGTGGCGCTG GGACGCCCTG CGTTTATCAT GCAATCTACT TGGAAGAAAT GGTTGCTTCA GAAGTTGCTC GAAAACTTGC CTCGGTGTTT AATATTCCTT TCCACCAAAT TAACCAGGTT TACAGACAGG GCCCCACTGG TATCCACATT CTTGTTAGTG ACCAGATGGT TCAGAACTTT CAAGATGAGA GTTGTTTTTT ATTCTCTACA GTAAAAGCTG AAAATAATGA TGGTATTCAC ATAATTTTGA AGTGA
The stop codons will be deleted if pcDNA3.1+ /C-(K)DYK vector is selected.
CloneID
ORa45788
Clone ID Related Accession (Same CDS sequence)
XM_008766630.1
Accession Version
XM_008766630.1 Latest version!
Documents for ORF clone product in default vector
Sequence Information
ORF Nucleotide Sequence (Length: 1644bp)
Protein sequence
SNP
Vector
pcDNA3.1+ /C-(K)DYK or customized vector
User Manual
Clone information
Clone Map
MSDS
Tag on pcDNA3.1+ /C-(K)DYK
C terminal DYKDDDDK tags
ORF Insert Method
CloneEZ™ Seamless cloning technology
Insert Structure
linear
Update Date
2016-07-25
Organism
Rattus norvegicus(Norway rat)
Product
upstream-binding protein 1 isoform X1
Comment
Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005107.4) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Status :: Full annotation
Annotation Version :: Rattus norvegicus Annotation Release 106
Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline
Annotation Software Version :: 7.1
Annotation Method :: Best-placed RefSeq; Gnomon
Features Annotated :: Gene; mRNA; CDS; ncRNA
##Genome-Annotation-Data-END##
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021 1081 1141 1201 1261 1321 1381 1441 1501 1561 1621 ATGGCCTGGG TGCTCAGTAT GGACGAGGTG ATCGAGTCCG GGCTGGTGCA CGACTTCGAC TCCAGCCTGT CCGGCATCGG ACAAGAGCTG GGCGCTGGCG CCTACAGCAT GAGTGATGTG TTGGCGCTAC CCATTTTCAA ACAAGAAGAC TCCAGCCTTT CTTTGGAGGC TGAGGCCAAG CACCCCCCAT TCCAGTACGT AATGTGTGCT GCAACCTCAC CAGCCGTGAA GCTGCATGAT GAGACGCTCA CTTACTTGAA CCAAGGCCAG TCTTATGAAA TTCGGATGCT GGATAATCGC AAAATGGGAG ATGTGCCTGA GATCAGTGGG AAGTTGGTGA AGAGCATCAT AAGAGTGGTG TTCCATGACA GACGGCTACA GTACACGGAG CATCAGCAGC TTGAAGGCTG GAAGTGGAAT CGCCCAGGAG ACCGGCTTCT TGATTTAGAT ATTCCAATGT CTGTGGGAAT AATTGACACA AGAACAAATC CAAGCCAGTT AAATGCAGTT GAATTTCTGT GGGACCCTGC AAAGCGCACA TCTGCCTTCA TTCAGGTACA CTGTATCAGC ACCGAATTCA CCCCACGTAA GCATGGAGGT GAAAAAGGAG TGCCTTTTAG GATCCAGGTT GACACCTTTA AGCAGAATGA AAACGGGGAA TACACAGATC ATCTTCACTC AGCTAGCTGC CAAATCAAAG TCTTTAAGCC TAAAGGTGCG GACAGGAAAC AAAAAAATGA CCGAGAAAAG ATGGAGAAGA GAACAGCTCA TGAAAAAGAA AAGTATCAGC CGTCTTACGA CACCACCATC CTCACAGAGA TGAGGCTTGA GCCTATAATT GAAGATGCAG TTGAACATGA GCAGAAAAAG TCCAGCAAGC GGACTTTGCC AGCAGACTAC GGTGATTCTC TGGCAAAGCG AGGCAGTTGC TCTCCATGGC CCGACACCCC TACAGCCTAT GTGAATAACA GCCCTTCCCC AGCGCCCACT TTCACCTCCT CACAGCAGAG CACGTGCAGT GTCCCAGACA GCAATTCTTC ATCCCCAAAT CACCAGGGAG ATGGAGTTGC ACAGGCATCC GGGGAGCAAA TTCAGCCTTC AGCTACAACC CAGGAAACAC AGCAGTGGCT GCTCAAAAAC AGGTTCTCTT CCTACACAAG ACTGTTCTCT AATTTTTCAG GTGCCGACTT ATTAAAGCTG ACAAAGGAGG ATTTAGTTCA GATTTGTGGT GCAGCCGATG GAATTAGGCT CTATAATTCC CTGAAGTCAA GGTCGGTTAG GCCCCGCTTA ACCATCTATG TCTGCCAGGA GCAGCCGAGC AGTGCTGTGC CACAAGGGCA GCCACAAGCT GCAGGCAGTG GAGGTGAAGG TGGCGCTGGG ACGCCCTGCG TTTATCATGC AATCTACTTG GAAGAAATGG TTGCTTCAGA AGTTGCTCGA AAACTTGCCT CGGTGTTTAA TATTCCTTTC CACCAAATTA ACCAGGTTTA CAGACAGGGC CCCACTGGTA TCCACATTCT TGTTAGTGAC CAGATGGTTC AGAACTTTCA AGATGAGAGT TGTTTTTTAT TCTCTACAGT AAAAGGTACT TTTTATGTGT GTGTGCCTTG GTGTGTTGTG ATTATGAAGG ACACGGTGAC CTGA
The stop codons will be deleted if pcDNA3.1+ /C-(K)DYK vector is selected.
RefSeq
XP_008764852.1
CDS 234..1877
Translation
Target ORF information:
RefSeq Version XM_008766630.1
Organism Rattus norvegicus(Norway rat)
Definition Rattus norvegicus upstream binding protein 1 (LBP-1a) (Ubp1), transcript variant X1, mRNA.
Target ORF information:
Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+ /C-(K)DYK
XM_008766630.1
ORF Insert Sequence:
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021 1081 1141 1201 1261 1321 1381 1441 1501 1561 1621 ATGGCCTGGG TGCTCAGTAT GGACGAGGTG ATCGAGTCCG GGCTGGTGCA CGACTTCGAC TCCAGCCTGT CCGGCATCGG ACAAGAGCTG GGCGCTGGCG CCTACAGCAT GAGTGATGTG TTGGCGCTAC CCATTTTCAA ACAAGAAGAC TCCAGCCTTT CTTTGGAGGC TGAGGCCAAG CACCCCCCAT TCCAGTACGT AATGTGTGCT GCAACCTCAC CAGCCGTGAA GCTGCATGAT GAGACGCTCA CTTACTTGAA CCAAGGCCAG TCTTATGAAA TTCGGATGCT GGATAATCGC AAAATGGGAG ATGTGCCTGA GATCAGTGGG AAGTTGGTGA AGAGCATCAT AAGAGTGGTG TTCCATGACA GACGGCTACA GTACACGGAG CATCAGCAGC TTGAAGGCTG GAAGTGGAAT CGCCCAGGAG ACCGGCTTCT TGATTTAGAT ATTCCAATGT CTGTGGGAAT AATTGACACA AGAACAAATC CAAGCCAGTT AAATGCAGTT GAATTTCTGT GGGACCCTGC AAAGCGCACA TCTGCCTTCA TTCAGGTACA CTGTATCAGC ACCGAATTCA CCCCACGTAA GCATGGAGGT GAAAAAGGAG TGCCTTTTAG GATCCAGGTT GACACCTTTA AGCAGAATGA AAACGGGGAA TACACAGATC ATCTTCACTC AGCTAGCTGC CAAATCAAAG TCTTTAAGCC TAAAGGTGCG GACAGGAAAC AAAAAAATGA CCGAGAAAAG ATGGAGAAGA GAACAGCTCA TGAAAAAGAA AAGTATCAGC CGTCTTACGA CACCACCATC CTCACAGAGA TGAGGCTTGA GCCTATAATT GAAGATGCAG TTGAACATGA GCAGAAAAAG TCCAGCAAGC GGACTTTGCC AGCAGACTAC GGTGATTCTC TGGCAAAGCG AGGCAGTTGC TCTCCATGGC CCGACACCCC TACAGCCTAT GTGAATAACA GCCCTTCCCC AGCGCCCACT TTCACCTCCT CACAGCAGAG CACGTGCAGT GTCCCAGACA GCAATTCTTC ATCCCCAAAT CACCAGGGAG ATGGAGTTGC ACAGGCATCC GGGGAGCAAA TTCAGCCTTC AGCTACAACC CAGGAAACAC AGCAGTGGCT GCTCAAAAAC AGGTTCTCTT CCTACACAAG ACTGTTCTCT AATTTTTCAG GTGCCGACTT ATTAAAGCTG ACAAAGGAGG ATTTAGTTCA GATTTGTGGT GCAGCCGATG GAATTAGGCT CTATAATTCC CTGAAGTCAA GGTCGGTTAG GCCCCGCTTA ACCATCTATG TCTGCCAGGA GCAGCCGAGC AGTGCTGTGC CACAAGGGCA GCCACAAGCT GCAGGCAGTG GAGGTGAAGG TGGCGCTGGG ACGCCCTGCG TTTATCATGC AATCTACTTG GAAGAAATGG TTGCTTCAGA AGTTGCTCGA AAACTTGCCT CGGTGTTTAA TATTCCTTTC CACCAAATTA ACCAGGTTTA CAGACAGGGC CCCACTGGTA TCCACATTCT TGTTAGTGAC CAGATGGTTC AGAACTTTCA AGATGAGAGT TGTTTTTTAT TCTCTACAGT AAAAGGTACT TTTTATGTGT GTGTGCCTTG GTGTGTTGTG ATTATGAAGG ACACGGTGAC CTGA
The stop codons will be deleted if pcDNA3.1+ /C-(K)DYK vector is selected.
CloneID
ORa45789
Clone ID Related Accession (Same CDS sequence)
XM_008766631.1
Accession Version
XM_008766631.1 Latest version!
Documents for ORF clone product in default vector
Sequence Information
ORF Nucleotide Sequence (Length: 1536bp)
Protein sequence
SNP
Vector
pcDNA3.1+ /C-(K)DYK or customized vector
User Manual
Clone information
Clone Map
MSDS
Tag on pcDNA3.1+ /C-(K)DYK
C terminal DYKDDDDK tags
ORF Insert Method
CloneEZ™ Seamless cloning technology
Insert Structure
linear
Update Date
2016-07-25
Organism
Rattus norvegicus(Norway rat)
Product
upstream-binding protein 1 isoform X2
Comment
Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005107.4) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Status :: Full annotation
Annotation Version :: Rattus norvegicus Annotation Release 106
Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline
Annotation Software Version :: 7.1
Annotation Method :: Best-placed RefSeq; Gnomon
Features Annotated :: Gene; mRNA; CDS; ncRNA
##Genome-Annotation-Data-END##
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021 1081 1141 1201 1261 1321 1381 1441 1501 ATGGCCTGGG TGCTCAGTAT GGACGAGGTG ATCGAGTCCG GGCTGGTGCA CGACTTCGAC TCCAGCCTGT CCGGCATCGG ACAAGAGCTG GGCGCTGGCG CCTACAGCAT GAGTGATGTG TTGGCGCTAC CCATTTTCAA ACAAGAAGAC TCCAGCCTTT CTTTGGAGGC TGAGGCCAAG CACCCCCCAT TCCAGTACGT AATGTGTGCT GCAACCTCAC CAGCCGTGAA GCTGCATGAT GAGACGCTCA CTTACTTGAA CCAAGGCCAG TCTTATGAAA TTCGGATGCT GGATAATCGC AAAATGGGAG ATGTGCCTGA GATCAGTGGG AAGTTGGTGA AGAGCATCAT AAGAGTGGTG TTCCATGACA GACGGCTACA GTACACGGAG CATCAGCAGC TTGAAGGCTG GAAGTGGAAT CGCCCAGGAG ACCGGCTTCT TGATTTAGAT ATTCCAATGT CTGTGGGAAT AATTGACACA AGAACAAATC CAAGCCAGTT AAATGCAGTT GAATTTCTGT GGGACCCTGC AAAGCGCACA TCTGCCTTCA TTCAGGTACA CTGTATCAGC ACCGAATTCA CCCCACGTAA GCATGGAGGT GAAAAAGGAG TGCCTTTTAG GATCCAGGTT GACACCTTTA AGCAGAATGA AAACGGGGAA TACACAGATC ATCTTCACTC AGCTAGCTGC CAAATCAAAG TCTTTAAGCC TAAAGGTGCG GACAGGAAAC AAAAAAATGA CCGAGAAAAG ATGGAGAAGA GAACAGCTCA TGAAAAAGAA AAGTATCAGC CGTCTTACGA CACCACCATC CTCACAGAGT GCTCTCCATG GCCCGACACC CCTACAGCCT ATGTGAATAA CAGCCCTTCC CCAGCGCCCA CTTTCACCTC CTCACAGCAG AGCACGTGCA GTGTCCCAGA CAGCAATTCT TCATCCCCAA ATCACCAGGG AGATGGAGTT GCACAGGCAT CCGGGGAGCA AATTCAGCCT TCAGCTACAA CCCAGGAAAC ACAGCAGTGG CTGCTCAAAA ACAGGTTCTC TTCCTACACA AGACTGTTCT CTAATTTTTC AGGTGCCGAC TTATTAAAGC TGACAAAGGA GGATTTAGTT CAGATTTGTG GTGCAGCCGA TGGAATTAGG CTCTATAATT CCCTGAAGTC AAGGTCGGTT AGGCCCCGCT TAACCATCTA TGTCTGCCAG GAGCAGCCGA GCAGTGCTGT GCCACAAGGG CAGCCACAAG CTGCAGGCAG TGGAGGTGAA GGTGGCGCTG GGACGCCCTG CGTTTATCAT GCAATCTACT TGGAAGAAAT GGTTGCTTCA GAAGTTGCTC GAAAACTTGC CTCGGTGTTT AATATTCCTT TCCACCAAAT TAACCAGGTT TACAGACAGG GCCCCACTGG TATCCACATT CTTGTTAGTG ACCAGATGGT TCAGAACTTT CAAGATGAGA GTTGTTTTTT ATTCTCTACA GTAAAAGGTA CTTTTTATGT GTGTGTGCCT TGGTGTGTTG TGATTATGAA GGACACGGTG ACCTGA
The stop codons will be deleted if pcDNA3.1+ /C-(K)DYK vector is selected.
RefSeq
XP_008764853.1
CDS 185..1720
Translation
Target ORF information:
RefSeq Version XM_008766631.1
Organism Rattus norvegicus(Norway rat)
Definition Rattus norvegicus upstream binding protein 1 (LBP-1a) (Ubp1), transcript variant X2, mRNA.
Target ORF information:
Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+ /C-(K)DYK
XM_008766631.1
ORF Insert Sequence:
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021 1081 1141 1201 1261 1321 1381 1441 1501 ATGGCCTGGG TGCTCAGTAT GGACGAGGTG ATCGAGTCCG GGCTGGTGCA CGACTTCGAC TCCAGCCTGT CCGGCATCGG ACAAGAGCTG GGCGCTGGCG CCTACAGCAT GAGTGATGTG TTGGCGCTAC CCATTTTCAA ACAAGAAGAC TCCAGCCTTT CTTTGGAGGC TGAGGCCAAG CACCCCCCAT TCCAGTACGT AATGTGTGCT GCAACCTCAC CAGCCGTGAA GCTGCATGAT GAGACGCTCA CTTACTTGAA CCAAGGCCAG TCTTATGAAA TTCGGATGCT GGATAATCGC AAAATGGGAG ATGTGCCTGA GATCAGTGGG AAGTTGGTGA AGAGCATCAT AAGAGTGGTG TTCCATGACA GACGGCTACA GTACACGGAG CATCAGCAGC TTGAAGGCTG GAAGTGGAAT CGCCCAGGAG ACCGGCTTCT TGATTTAGAT ATTCCAATGT CTGTGGGAAT AATTGACACA AGAACAAATC CAAGCCAGTT AAATGCAGTT GAATTTCTGT GGGACCCTGC AAAGCGCACA TCTGCCTTCA TTCAGGTACA CTGTATCAGC ACCGAATTCA CCCCACGTAA GCATGGAGGT GAAAAAGGAG TGCCTTTTAG GATCCAGGTT GACACCTTTA AGCAGAATGA AAACGGGGAA TACACAGATC ATCTTCACTC AGCTAGCTGC CAAATCAAAG TCTTTAAGCC TAAAGGTGCG GACAGGAAAC AAAAAAATGA CCGAGAAAAG ATGGAGAAGA GAACAGCTCA TGAAAAAGAA AAGTATCAGC CGTCTTACGA CACCACCATC CTCACAGAGT GCTCTCCATG GCCCGACACC CCTACAGCCT ATGTGAATAA CAGCCCTTCC CCAGCGCCCA CTTTCACCTC CTCACAGCAG AGCACGTGCA GTGTCCCAGA CAGCAATTCT TCATCCCCAA ATCACCAGGG AGATGGAGTT GCACAGGCAT CCGGGGAGCA AATTCAGCCT TCAGCTACAA CCCAGGAAAC ACAGCAGTGG CTGCTCAAAA ACAGGTTCTC TTCCTACACA AGACTGTTCT CTAATTTTTC AGGTGCCGAC TTATTAAAGC TGACAAAGGA GGATTTAGTT CAGATTTGTG GTGCAGCCGA TGGAATTAGG CTCTATAATT CCCTGAAGTC AAGGTCGGTT AGGCCCCGCT TAACCATCTA TGTCTGCCAG GAGCAGCCGA GCAGTGCTGT GCCACAAGGG CAGCCACAAG CTGCAGGCAG TGGAGGTGAA GGTGGCGCTG GGACGCCCTG CGTTTATCAT GCAATCTACT TGGAAGAAAT GGTTGCTTCA GAAGTTGCTC GAAAACTTGC CTCGGTGTTT AATATTCCTT TCCACCAAAT TAACCAGGTT TACAGACAGG GCCCCACTGG TATCCACATT CTTGTTAGTG ACCAGATGGT TCAGAACTTT CAAGATGAGA GTTGTTTTTT ATTCTCTACA GTAAAAGGTA CTTTTTATGT GTGTGTGCCT TGGTGTGTTG TGATTATGAA GGACACGGTG ACCTGA
The stop codons will be deleted if pcDNA3.1+ /C-(K)DYK vector is selected.