Gene Symbol | Upk1b |
Entrez Gene ID | 303924 |
Full Name | uroplakin 1B |
General protein information |
|
Gene Type | protein-coding |
Organism | Rattus norvegicus(Norway rat) |
Genome |
ORF » Species Summary » Rattus norvegicus » Upk1b cDNA ORF clone
Gene Symbol | Upk1b |
Entrez Gene ID | 303924 |
Full Name | uroplakin 1B |
General protein information |
|
Gene Type | protein-coding |
Organism | Rattus norvegicus(Norway rat) |
Genome |
mRNA | Protein | Name |
---|---|---|
NM_001024253.1 | NP_001019424.1 | uroplakin-1b |
XM_006248367.2 | XP_006248429.1 | uroplakin-1b isoform X1 |
XM_006248368.3 | XP_006248430.1 | uroplakin-1b isoform X2 |
UPK1B | XP_001108219.1 | |
Bos taurus (cattle) | UPK1B | NP_776907.2 |
Rattus norvegicus (Norway rat) | Upk1b | NP_001019424.1 |
Homo sapiens (human) | UPK1B | NP_008883.2 |
Mus musculus (house mouse) | Upk1b | NP_849255.2 |
Xenopus tropicalis (tropical clawed frog) | upk1b | NP_001037968.1 |
Gallus gallus (chicken) | UPK1B | XP_416567.3 |
Pan troglodytes (chimpanzee) | UPK1B | XP_526274.3 |
Canis lupus familiaris (dog) | UPK1B | XP_850140.2 |
Impact of lactobacilli on orally acquired listeriosis.
Archambaud C, Nahori MA, Soubigou G, B?cavin C, Laval L, Lechat P, Smokvina T, Langella P, Lecuit M, Cossart P
Proceedings of the National Academy of Sciences of the United States of America109(41)16684-9(2012 Oct)
MAL facilitates the incorporation of exocytic uroplakin-delivering vesicles into the apical membrane of urothelial umbrella cells.
Zhou G, Liang FX, Romih R, Wang Z, Liao Y, Ghiso J, Luque-Garcia JL, Neubert TA, Kreibich G, Alonso MA, Schaeren-Wiemers N, Sun TT
Molecular biology of the cell23(7)1354-66(2012 Apr)
Altered expression of UPIa, UPIb, UPII, and UPIIIa during urothelial carcinogenesis induced by N-butyl-N-(4-hydroxybutyl)nitrosamine in rats.
Zupan?i? D, Ov?ak Z, Vidmar G, Romih R
Virchows Archiv : an international journal of pathology458(5)603-13(2011 May)
Large-scale proteomics and phosphoproteomics of urinary exosomes.
Gonzales PA, Pisitkun T, Hoffert JD, Tchapyjnikov D, Star RA, Kleta R, Wang NS, Knepper MA
Journal of the American Society of Nephrology : JASN20(2)363-79(2009 Feb)
Immunohistochemical analysis of uroplakins, urothelial specific proteins, in ovarian Brenner tumors, normal tissues, and benign and neoplastic lesions of the female genital tract.
Ogawa K, Johansson SL, Cohen SM
The American journal of pathology155(4)1047-50(1999 Oct)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
During urothelial carcinogenesis, UPII expression was the most decreased in all urothelial lesions, while UPIa, UPIb, and UPIIIa expression was differently altered in different types of lesions
Title: Altered expression of UPIa, UPIb, UPII, and UPIIIa during urothelial carcinogenesis induced by N-butyl-N-(4-hydroxybutyl)nitrosamine in rats.
The following Upk1b gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the Upk1b cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | ORa06084 | |
Clone ID Related Accession (Same CDS sequence) | NM_001024253.1 , XM_006248368.3 | |
Accession Version | NM_001024253.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 783bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-04-18 | |
Organism | Rattus norvegicus(Norway rat) | |
Product | uroplakin-1b | |
Comment | Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC093613.1. ##Evidence-Data-START## Transcript exon combination :: BC093613.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA2689597, SAMEA2689599 [ECO:0000348] ##Evidence-Data-END## |
1 | ATGGCCAAAG ACGATTCCAC CGTTCGTTGC TTCCAGGGCC TGTTGATTTT TGGACACGTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001019424.1 |
CDS | 55..837 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001024253.1 |
1 | ATGGCCAAAG ACGATTCCAC CGTTCGTTGC TTCCAGGGCC TGTTGATTTT TGGACACGTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ORa06084 | |
Clone ID Related Accession (Same CDS sequence) | NM_001024253.1 , XM_006248368.3 | |
Accession Version | XM_006248368.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 783bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-07-25 | |
Organism | Rattus norvegicus(Norway rat) | |
Product | uroplakin-1b isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005110.4) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jul 26, 2016 this sequence version replaced XM_006248368.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGCCAAAG ACGATTCCAC CGTTCGTTGC TTCCAGGGCC TGTTGATTTT TGGACACGTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_006248430.1 |
CDS | 106..888 |
Translation |
Target ORF information:
Target ORF information:
|
XM_006248368.3 |
1 | ATGGCCAAAG ACGATTCCAC CGTTCGTTGC TTCCAGGGCC TGTTGATTTT TGGACACGTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ORa34290 | |
Clone ID Related Accession (Same CDS sequence) | XM_006248367.2 | |
Accession Version | XM_006248367.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 864bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-07-25 | |
Organism | Rattus norvegicus(Norway rat) | |
Product | uroplakin-1b isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005110.4) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Aug 7, 2014 this sequence version replaced XM_006248367.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGCTGTGGA GTGAGTCTGT GCAGCGTCAG GAAGAGACGG CAGAAGAGAC CAGGCAGCCA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_006248429.1 |
CDS | 181..1044 |
Translation |
Target ORF information:
Target ORF information:
|
XM_006248367.2 |
1 | ATGCTGTGGA GTGAGTCTGT GCAGCGTCAG GAAGAGACGG CAGAAGAGAC CAGGCAGCCA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Impact of lactobacilli on orally acquired listeriosis. |
MAL facilitates the incorporation of exocytic uroplakin-delivering vesicles into the apical membrane of urothelial umbrella cells. |
Altered expression of UPIa, UPIb, UPII, and UPIIIa during urothelial carcinogenesis induced by N-butyl-N-(4-hydroxybutyl)nitrosamine in rats. |
Large-scale proteomics and phosphoproteomics of urinary exosomes. |
Immunohistochemical analysis of uroplakins, urothelial specific proteins, in ovarian Brenner tumors, normal tissues, and benign and neoplastic lesions of the female genital tract. |