Gene Symbol | Sbno1 |
Entrez Gene ID | 304470 |
Full Name | strawberry notch homolog 1 |
General protein information |
|
Gene Type | protein-coding |
Organism | Rattus norvegicus(Norway rat) |
Genome |
ORF » Species Summary » Rattus norvegicus » Sbno1 cDNA ORF clone
Gene Symbol | Sbno1 |
Entrez Gene ID | 304470 |
Full Name | strawberry notch homolog 1 |
General protein information |
|
Gene Type | protein-coding |
Organism | Rattus norvegicus(Norway rat) |
Genome |
mRNA | Protein | Name |
---|---|---|
NM_001107138.1 | NP_001100608.1 | protein strawberry notch homolog 1 |
XM_008769225.2 | XP_008767447.1 | protein strawberry notch homolog 1 isoform X4 |
XM_008769226.2 | XP_008767448.1 | protein strawberry notch homolog 1 isoform X5 |
XM_006249300.3 | XP_006249362.1 | protein strawberry notch homolog 1 isoform X1 |
XM_017598328.1 | XP_017453817.1 | protein strawberry notch homolog 1 isoform X1 |
XM_008769224.2 | XP_008767446.1 | protein strawberry notch homolog 1 isoform X3 |
XM_006249301.3 | XP_006249363.1 | protein strawberry notch homolog 1 isoform X2 |
Canis lupus familiaris (dog) | SBNO1 | XP_849182.1 |
Danio rerio (zebrafish) | sbno1 | NP_001186845.1 |
Drosophila melanogaster (fruit fly) | sno | NP_001096967.1 |
Anopheles gambiae (African malaria mosquito) | AgaP_AGAP011199 | XP_309441.4 |
Arabidopsis thaliana (thale cress) | EMB1135 | NP_178053.4 |
Caenorhabditis elegans (roundworm) | let-765 | NP_498455.2 |
Mus musculus (house mouse) | Sbno1 | NP_001074672.1 |
Oryza sativa (rice) | Os08g0223700 | NP_001061272.2 |
Homo sapiens (human) | SBNO1 | NP_001161328.1 |
Pan troglodytes (chimpanzee) | SBNO1 | XP_522548.3 |
SBNO1 | XP_001097770.2 | |
Bos taurus (cattle) | SBNO1 | XP_002694612.2 |
Gallus gallus (chicken) | SBNO1 | NP_001026640.1 |
Xenopus tropicalis (tropical clawed frog) | sbno1 | XP_004910580.1 |
Rattus norvegicus (Norway rat) | Sbno1 | NP_001100608.1 |
Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.
Gaudet P, Livstone MS, Lewis SE, Thomas PD
Briefings in bioinformatics12(5)449-62(2011 Sep)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following Sbno1 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the Sbno1 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | ORa05187 | |
Clone ID Related Accession (Same CDS sequence) | NM_001107138.1 | |
Accession Version | NM_001107138.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 3726bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-07-20 | |
Organism | Rattus norvegicus(Norway rat) | |
Product | protein strawberry notch homolog 1 | |
Comment | Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from CH473973.1. On or before Oct 4, 2007 this sequence version replaced XM_222152.4, XM_001074548.1. ##Evidence-Data-START## RNAseq introns :: mixed/partial sample support SAMEA2689604, SAMN00632259 [ECO:0000350] ##Evidence-Data-END## |
1 | ATGGTGGAAC CAGGGCAAGA TTTACTACTT GCGGCCTTGA GCGAGAGTGG GATTAGTCCG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001100608.1 |
CDS | 61..3786 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001107138.1 |
1 | ATGGTGGAAC CAGGGCAAGA TTTACTACTT GCGGCCTTGA GCGAGAGTGG GATTAGTCCG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ORa46148 | |
Clone ID Related Accession (Same CDS sequence) | XM_008769226.2 | |
Accession Version | XM_008769226.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 3561bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-07-25 | |
Organism | Rattus norvegicus(Norway rat) | |
Product | protein strawberry notch homolog 1 isoform X5 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005111.4) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Jul 26, 2016 this sequence version replaced XM_008769226.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGAAGATGA GAAGCTTTTC CCCCACTATG AAGGTTCCTG TTGTGAGAGA AGAAGATGAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_008767448.1 |
CDS | 161..3721 |
Translation |
Target ORF information:
Target ORF information:
|
XM_008769226.2 |
1 | ATGAAGATGA GAAGCTTTTC CCCCACTATG AAGGTTCCTG TTGTGAGAGA AGAAGATGAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ORa34872 | |
Clone ID Related Accession (Same CDS sequence) | XM_006249300.3 , XM_017598328.1 | |
Accession Version | XM_006249300.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 4179bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-07-25 | |
Organism | Rattus norvegicus(Norway rat) | |
Product | protein strawberry notch homolog 1 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005111.4) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Jul 26, 2016 this sequence version replaced XM_006249300.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGTGGAAC CAGGGCAAGA TTTACTACTT GCGGCCTTGA GCGAGAGTGG GATTAGTCCG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_006249362.1 |
CDS | 638..4816 |
Translation |
Target ORF information:
Target ORF information:
|
XM_006249300.3 |
1 | ATGGTGGAAC CAGGGCAAGA TTTACTACTT GCGGCCTTGA GCGAGAGTGG GATTAGTCCG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ORa34872 | |
Clone ID Related Accession (Same CDS sequence) | XM_006249300.3 , XM_017598328.1 | |
Accession Version | XM_017598328.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 4179bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-07-25 | |
Organism | Rattus norvegicus(Norway rat) | |
Product | protein strawberry notch homolog 1 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005111.4) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGTGGAAC CAGGGCAAGA TTTACTACTT GCGGCCTTGA GCGAGAGTGG GATTAGTCCG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_017453817.1 |
CDS | 213..4391 |
Translation |
Target ORF information:
Target ORF information:
|
XM_017598328.1 |
1 | ATGGTGGAAC CAGGGCAAGA TTTACTACTT GCGGCCTTGA GCGAGAGTGG GATTAGTCCG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ORa34873 | |
Clone ID Related Accession (Same CDS sequence) | XM_006249301.3 | |
Accession Version | XM_006249301.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 4176bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-07-25 | |
Organism | Rattus norvegicus(Norway rat) | |
Product | protein strawberry notch homolog 1 isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005111.4) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Jul 26, 2016 this sequence version replaced XM_006249301.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGTGGAAC CAGGGCAAGA TTTACTACTT GCGGCCTTGA GCGAGAGTGG GATTAGTCCG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_006249363.1 |
CDS | 638..4813 |
Translation |
Target ORF information:
Target ORF information:
|
XM_006249301.3 |
1 | ATGGTGGAAC CAGGGCAAGA TTTACTACTT GCGGCCTTGA GCGAGAGTGG GATTAGTCCG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ORa46146 | |
Clone ID Related Accession (Same CDS sequence) | XM_008769224.2 | |
Accession Version | XM_008769224.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 4074bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-07-25 | |
Organism | Rattus norvegicus(Norway rat) | |
Product | protein strawberry notch homolog 1 isoform X3 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005111.4) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Jul 26, 2016 this sequence version replaced XM_008769224.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGTGGAAC CAGGGCAAGA TTTACTACTT GCGGCCTTGA GCGAGAGTGG GATTAGTCCG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_008767446.1 |
CDS | 638..4711 |
Translation |
Target ORF information:
Target ORF information:
|
XM_008769224.2 |
1 | ATGGTGGAAC CAGGGCAAGA TTTACTACTT GCGGCCTTGA GCGAGAGTGG GATTAGTCCG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ORa46147 | |
Clone ID Related Accession (Same CDS sequence) | XM_008769225.2 | |
Accession Version | XM_008769225.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 4071bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-07-25 | |
Organism | Rattus norvegicus(Norway rat) | |
Product | protein strawberry notch homolog 1 isoform X4 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005111.4) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Jul 26, 2016 this sequence version replaced XM_008769225.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGTGGAAC CAGGGCAAGA TTTACTACTT GCGGCCTTGA GCGAGAGTGG GATTAGTCCG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_008767447.1 |
CDS | 638..4708 |
Translation |
Target ORF information:
Target ORF information:
|
XM_008769225.2 |
1 | ATGGTGGAAC CAGGGCAAGA TTTACTACTT GCGGCCTTGA GCGAGAGTGG GATTAGTCCG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. |