Gene Symbol | Trmt1l |
Entrez Gene ID | 304851 |
Full Name | tRNA methyltransferase 1-like |
Synonyms | RGD1307890,Trm1l |
General protein information |
|
Gene Type | protein-coding |
Organism | Rattus norvegicus(Norway rat) |
Genome |
ORF » Species Summary » Rattus norvegicus » Trmt1l cDNA ORF clone
Gene Symbol | Trmt1l |
Entrez Gene ID | 304851 |
Full Name | tRNA methyltransferase 1-like |
Synonyms | RGD1307890,Trm1l |
General protein information |
|
Gene Type | protein-coding |
Organism | Rattus norvegicus(Norway rat) |
Genome |
mRNA | Protein | Name |
---|---|---|
XM_006249992.3 | XP_006250054.1 | TRMT1-like protein isoform X1 |
XM_017598808.1 | XP_017454297.1 | TRMT1-like protein isoform X3 |
NM_001037192.1 | NP_001032269.1 | TRMT1-like protein |
XM_017598807.1 | XP_017454296.1 | TRMT1-like protein isoform X3 |
XM_006249993.3 | XP_006250055.1 | TRMT1-like protein isoform X2 |
XM_008769632.1 | XP_008767854.1 | TRMT1-like protein isoform X3 |
Homo sapiens (human) | TRMT1L | NP_112196.3 |
Canis lupus familiaris (dog) | TRMT1L | XP_849853.1 |
Rattus norvegicus (Norway rat) | Trmt1l | NP_001032269.1 |
Pan troglodytes (chimpanzee) | TRMT1L | XP_514058.2 |
TRMT1L | XP_001113820.1 | |
Xenopus tropicalis (tropical clawed frog) | trmt1l | XP_004913842.1 |
Gallus gallus (chicken) | TRMT1L | XP_003643222.2 |
Danio rerio (zebrafish) | trmt1l | XP_688031.4 |
Bos taurus (cattle) | TRMT1L | NP_001091590.1 |
Mus musculus (house mouse) | Trmt1l | NP_081152.2 |
Insights into RNA biology from an atlas of mammalian mRNA-binding proteins.
Castello A, Fischer B, Eichelbaum K, Horos R, Beckmann BM, Strein C, Davey NE, Humphreys DT, Preiss T, Steinmetz LM, Krijgsveld J, Hentze MW
Cell149(6)1393-406(2012 Jun)
The mouse Trm1-like gene is expressed in neural tissues and plays a role in motor coordination and exploratory behaviour.
Vauti F, Goller T, Beine R, Becker L, Klopstock T, H?lter SM, Wurst W, Fuchs H, Gailus-Durner V, de Angelis MH, Arnold HH
Gene389(2)174-85(2007 Mar)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following Trmt1l gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the Trmt1l cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | ORa09017 | |
Clone ID Related Accession (Same CDS sequence) | NM_001037192.1 | |
Accession Version | NM_001037192.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2172bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-02-16 | |
Organism | Rattus norvegicus(Norway rat) | |
Product | TRMT1-like protein | |
Comment | Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC100650.1. On Nov 18, 2005 this sequence version replaced XM_222727.3. ##Evidence-Data-START## Transcript exon combination :: BC100650.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMD00052296, SAMD00052297 [ECO:0000348] ##Evidence-Data-END## |
1 | ATGGAGAATA TGGCGGAGGA GGAGCTGCTA CCCCAGGAGA AGGAGGAGGC CCAGGTCAGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001032269.1 |
CDS | 221..2392 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001037192.1 |
1 | ATGGAGAATA TGGCGGAGGA GGAGCTGCTA CCCCAGGAGA AGGAGGAGGC CCAGGTCAGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ORa35446 | |
Clone ID Related Accession (Same CDS sequence) | XM_017598808.1 , XM_017598807.1 , XM_008769632.1 | |
Accession Version | XM_017598808.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1725bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-07-25 | |
Organism | Rattus norvegicus(Norway rat) | |
Product | TRMT1-like protein isoform X3 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005112.4) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGTGCATCT GTCACTTAGC GTGCCGGCCA GTGAAGCCAA CAATTGTTGG AGAGCAGATA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_017454297.1 |
CDS | 318..2042 |
Translation |
Target ORF information:
Target ORF information:
|
XM_017598808.1 |
1 | ATGTGCATCT GTCACTTAGC GTGCCGGCCA GTGAAGCCAA CAATTGTTGG AGAGCAGATA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ORa35446 | |
Clone ID Related Accession (Same CDS sequence) | XM_017598808.1 , XM_017598807.1 , XM_008769632.1 | |
Accession Version | XM_017598807.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1725bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-07-25 | |
Organism | Rattus norvegicus(Norway rat) | |
Product | TRMT1-like protein isoform X3 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005112.4) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGTGCATCT GTCACTTAGC GTGCCGGCCA GTGAAGCCAA CAATTGTTGG AGAGCAGATA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_017454296.1 |
CDS | 599..2323 |
Translation |
Target ORF information:
Target ORF information:
|
XM_017598807.1 |
1 | ATGTGCATCT GTCACTTAGC GTGCCGGCCA GTGAAGCCAA CAATTGTTGG AGAGCAGATA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ORa35446 | |
Clone ID Related Accession (Same CDS sequence) | XM_017598808.1 , XM_017598807.1 , XM_008769632.1 | |
Accession Version | XM_008769632.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1725bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-07-25 | |
Organism | Rattus norvegicus(Norway rat) | |
Product | TRMT1-like protein isoform X3 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005112.4) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGTGCATCT GTCACTTAGC GTGCCGGCCA GTGAAGCCAA CAATTGTTGG AGAGCAGATA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_008767854.1 |
CDS | 210..1934 |
Translation |
Target ORF information:
Target ORF information:
|
XM_008769632.1 |
1 | ATGTGCATCT GTCACTTAGC GTGCCGGCCA GTGAAGCCAA CAATTGTTGG AGAGCAGATA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ORa35444 | |
Clone ID Related Accession (Same CDS sequence) | XM_006249992.3 | |
Accession Version | XM_006249992.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2178bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-07-25 | |
Organism | Rattus norvegicus(Norway rat) | |
Product | TRMT1-like protein isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005112.4) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jul 26, 2016 this sequence version replaced XM_006249992.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGAGAATA TGGCGGAGGA GGAGCTGCTA CCCCAGGAGA AGGAGGAGGC CCAGGTCAGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_006250054.1 |
CDS | 325..2502 |
Translation |
Target ORF information:
Target ORF information:
|
XM_006249992.3 |
1 | ATGGAGAATA TGGCGGAGGA GGAGCTGCTA CCCCAGGAGA AGGAGGAGGC CCAGGTCAGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ORa35445 | |
Clone ID Related Accession (Same CDS sequence) | XM_006249993.3 | |
Accession Version | XM_006249993.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2115bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-07-25 | |
Organism | Rattus norvegicus(Norway rat) | |
Product | TRMT1-like protein isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005112.4) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jul 26, 2016 this sequence version replaced XM_006249993.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGAGAATA TGGCGGAGGA GGAGCTGCTA CCCCAGGAGA AGGAGGAGGC CCAGGTCAGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_006250055.1 |
CDS | 327..2441 |
Translation |
Target ORF information:
Target ORF information:
|
XM_006249993.3 |
1 | ATGGAGAATA TGGCGGAGGA GGAGCTGCTA CCCCAGGAGA AGGAGGAGGC CCAGGTCAGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Insights into RNA biology from an atlas of mammalian mRNA-binding proteins. |
The mouse Trm1-like gene is expressed in neural tissues and plays a role in motor coordination and exploratory behaviour. |