Gene Symbol | Samd4a |
Entrez Gene ID | 305826 |
Full Name | sterile alpha motif domain containing 4A |
Synonyms | Samd4 |
General protein information |
|
Gene Type | protein-coding |
Organism | Rattus norvegicus(Norway rat) |
Genome |
ORF » Species Summary » Rattus norvegicus » Samd4a cDNA ORF clone
Gene Symbol | Samd4a |
Entrez Gene ID | 305826 |
Full Name | sterile alpha motif domain containing 4A |
Synonyms | Samd4 |
General protein information |
|
Gene Type | protein-coding |
Organism | Rattus norvegicus(Norway rat) |
Genome |
mRNA | Protein | Name |
---|---|---|
XM_017599655.1 | XP_017455144.1 | protein Smaug homolog 1 isoform X2 |
XM_008770515.2 | XP_008768737.1 | protein Smaug homolog 1 isoform X3 |
NM_001107254.1 | NP_001100724.1 | protein Smaug homolog 1 |
XM_017599654.1 | XP_017455143.1 | protein Smaug homolog 1 isoform X1 |
XM_017599656.1 | XP_017455145.1 | protein Smaug homolog 1 isoform X4 |
SAMD4A | XP_001086657.1 | |
Gallus gallus (chicken) | SAMD4A | XP_421450.2 |
Danio rerio (zebrafish) | LOC100149858 | XP_001920698.3 |
Mus musculus (house mouse) | Samd4 | NP_001032298.1 |
Canis lupus familiaris (dog) | SAMD4A | XP_864435.2 |
Bos taurus (cattle) | SAMD4A | NP_001193782.1 |
Homo sapiens (human) | SAMD4A | NP_056404.4 |
Pan troglodytes (chimpanzee) | SAMD4A | XP_001161128.1 |
Rattus norvegicus (Norway rat) | Samd4a | NP_001100724.1 |
Xenopus tropicalis (tropical clawed frog) | samd4a | NP_001072580.1 |
Insights into RNA biology from an atlas of mammalian mRNA-binding proteins.
Castello A, Fischer B, Eichelbaum K, Horos R, Beckmann BM, Strein C, Davey NE, Humphreys DT, Preiss T, Steinmetz LM, Krijgsveld J, Hentze MW
Cell149(6)1393-406(2012 Jun)
Mammalian Smaug is a translational repressor that forms cytoplasmic foci similar to stress granules.
Baez MV, Boccaccio GL
The Journal of biological chemistry280(52)43131-40(2005 Dec)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following Samd4a gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the Samd4a cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | ORa11993 | |
Clone ID Related Accession (Same CDS sequence) | NM_001107254.1 | |
Accession Version | NM_001107254.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1794bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-02-19 | |
Organism | Rattus norvegicus(Norway rat) | |
Product | protein Smaug homolog 1 | |
Comment | Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from CH474040.1. On or before Oct 4, 2007 this sequence version replaced XM_223945.4, XM_001062223.1. ##Evidence-Data-START## RNAseq introns :: mixed/partial sample support SAMEA2689604, SAMN01906357 [ECO:0000350] ##Evidence-Data-END## |
1 | ATGAAACTGC TGCCCAAGAT CCTGGCACAC TCTATCGACC ATAACCAGCA CATTGAGGAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001100724.1 |
CDS | 411..2204 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001107254.1 |
1 | ATGAAACTGC TGCCCAAGAT CCTGGCACAC TCTATCGACC ATAACCAGCA CATTGAGGAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ORa46331 | |
Clone ID Related Accession (Same CDS sequence) | XM_008770515.2 | |
Accession Version | XM_008770515.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1860bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-07-25 | |
Organism | Rattus norvegicus(Norway rat) | |
Product | protein Smaug homolog 1 isoform X3 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005114.4) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Jul 26, 2016 this sequence version replaced XM_008770515.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGAAACTGC TGCCCAAGAT CCTGGCACAC TCTATCGACC ATAACCAGCA CATTGAGGAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_008768737.1 |
CDS | 1246..3105 |
Translation |
Target ORF information:
Target ORF information:
|
XM_008770515.2 |
1 | ATGAAACTGC TGCCCAAGAT CCTGGCACAC TCTATCGACC ATAACCAGCA CATTGAGGAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ORa58578 | |
Clone ID Related Accession (Same CDS sequence) | XM_017599656.1 | |
Accession Version | XM_017599656.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 936bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-07-25 | |
Organism | Rattus norvegicus(Norway rat) | |
Product | protein Smaug homolog 1 isoform X4 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005114.4) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGATCCTGA CGCCCATCAA GGCCTACAGC TCTCCCAGTA CCACCCCTGA GGTGCGACGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_017455145.1 |
CDS | 719..1654 |
Translation |
Target ORF information:
Target ORF information:
|
XM_017599656.1 |
1 | ATGATCCTGA CGCCCATCAA GGCCTACAGC TCTCCCAGTA CCACCCCTGA GGTGCGACGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ORa58576 | |
Clone ID Related Accession (Same CDS sequence) | XM_017599654.1 | |
Accession Version | XM_017599654.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2163bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-07-25 | |
Organism | Rattus norvegicus(Norway rat) | |
Product | protein Smaug homolog 1 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005114.4) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGATGTTTC GCGACCAGGT CGGGGTGCTG GCGGGCTGGT TTAAGGGCTG GAACGAGTGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_017455143.1 |
CDS | 454..2616 |
Translation |
Target ORF information:
Target ORF information:
|
XM_017599654.1 |
1 | ATGATGTTTC GCGACCAGGT CGGGGTGCTG GCGGGCTGGT TTAAGGGCTG GAACGAGTGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ORa58577 | |
Clone ID Related Accession (Same CDS sequence) | XM_017599655.1 | |
Accession Version | XM_017599655.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1899bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-07-25 | |
Organism | Rattus norvegicus(Norway rat) | |
Product | protein Smaug homolog 1 isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005114.4) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGATGTTTC GCGACCAGGT CGGGGTGCTG GCGGGCTGGT TTAAGGGCTG GAACGAGTGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_017455144.1 |
CDS | 12..1910 |
Translation |
Target ORF information:
Target ORF information:
|
XM_017599655.1 |
1 | ATGATGTTTC GCGACCAGGT CGGGGTGCTG GCGGGCTGGT TTAAGGGCTG GAACGAGTGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Insights into RNA biology from an atlas of mammalian mRNA-binding proteins. |
Mammalian Smaug is a translational repressor that forms cytoplasmic foci similar to stress granules. |