Gene Symbol | Ddi2 |
Entrez Gene ID | 313668 |
Full Name | DNA damage inducible 1 homolog 2 |
Synonyms | RGD1311815 |
General protein information |
|
Gene Type | protein-coding |
Organism | Rattus norvegicus(Norway rat) |
Genome |
ORF » Species Summary » Rattus norvegicus » Ddi2 cDNA ORF clone
Gene Symbol | Ddi2 |
Entrez Gene ID | 313668 |
Full Name | DNA damage inducible 1 homolog 2 |
Synonyms | RGD1311815 |
General protein information |
|
Gene Type | protein-coding |
Organism | Rattus norvegicus(Norway rat) |
Genome |
mRNA | Protein | Name |
---|---|---|
XM_006239308.3 | XP_006239370.1 | protein DDI1 homolog 2 isoform X3 |
XM_006239305.3 | XP_006239367.1 | protein DDI1 homolog 2 isoform X1 |
XM_006239309.2 | XP_006239371.1 | protein DDI1 homolog 2 isoform X4 |
NM_001034149.1 | NP_001029321.1 | protein DDI1 homolog 2 |
XM_006239306.3 | XP_006239368.1 | protein DDI1 homolog 2 isoform X2 |
DDI2 | XP_001083343.1 | |
Mus musculus (house mouse) | Ddi2 | NP_001017966.1 |
Rattus norvegicus (Norway rat) | Ddi2 | NP_001029321.1 |
Drosophila melanogaster (fruit fly) | rngo | NP_573129.1 |
Oryza sativa (rice) | Os02g0198600 | NP_001046209.1 |
Canis lupus familiaris (dog) | DDI2 | XP_005618021.1 |
Gallus gallus (chicken) | DDI2 | XP_004947602.1 |
Arabidopsis thaliana (thale cress) | AT3G13235 | NP_001189876.1 |
Pan troglodytes (chimpanzee) | DDI2 | XP_001150145.1 |
Danio rerio (zebrafish) | ddi2 | NP_938189.1 |
Xenopus tropicalis (tropical clawed frog) | ddi2 | NP_001029120.1 |
Homo sapiens (human) | DDI2 | NP_115717.3 |
Bos taurus (cattle) | DDI2 | XP_005217265.1 |
Removal of RTF2 from Stalled Replisomes Promotes Maintenance of Genome Integrity.
Kottemann MC, Conti BA, Lach FP, Smogorzewska A
Molecular cell69(1)24-35.e5(2018 Jan)
Reply to Vangala et al.: Complete inhibition of the proteasome reduces new proteasome production by causing Nrf1 aggregation.
Sha Z, Goldberg AL
Current biology : CB26(18)R836-R837(2016 Sep)
The aspartyl protease DDI2 activates Nrf1 to compensate for proteasome dysfunction.
Koizumi S, Irie T, Hirayama S, Sakurai Y, Yashiroda H, Naguro I, Ichijo H, Hamazaki J, Murata S
eLife5(2016 08)
Human DNA-Damage-Inducible 2 Protein Is Structurally and Functionally Distinct from Its Yeast Ortholog.
Siv? M, Svoboda M, Veverka V, Trempe JF, Hofmann K, Ko???ek M, Hexnerov? R, Sedl?k F, Belza J, Brynda J, ??cha P, Hub?lek M, Starkov? J, Flaisigov? I, Konvalinka J, ?a?kov? KG
Scientific reports630443(2016 Jul)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following Ddi2 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the Ddi2 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | ORa08899 | |
Clone ID Related Accession (Same CDS sequence) | NM_001034149.1 | |
Accession Version | NM_001034149.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 900bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-04-18 | |
Organism | Rattus norvegicus(Norway rat) | |
Product | protein DDI1 homolog 2 | |
Comment | Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC097361.1. On Oct 14, 2005 this sequence version replaced XM_233612.3. ##Evidence-Data-START## Transcript exon combination :: BC097361.1 [ECO:0000332] RNAseq introns :: mixed/partial sample support SAMD00052296, SAMD00052297 [ECO:0000350] ##Evidence-Data-END## |
1 | ATGCTGCTCA CCGTGTACTG TGTGCGGAGG GACCTCTCCG AGGTGACCTT TTCCCTCCAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001029321.1 |
CDS | 179..1078 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001034149.1 |
1 | ATGCTGCTCA CCGTGTACTG TGTGCGGAGG GACCTCTCCG AGGTGACCTT TTCCCTCCAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ORa28855 | |
Clone ID Related Accession (Same CDS sequence) | XM_006239308.3 | |
Accession Version | XM_006239308.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1782bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-07-25 | |
Organism | Rattus norvegicus(Norway rat) | |
Product | protein DDI1 homolog 2 isoform X3 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005104.4) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jul 26, 2016 this sequence version replaced XM_006239308.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGAGAAAA GCAGTAAAGA ATCTACCTCA CTGGGAACGC CATCATTGCT GACTTCAGAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_006239370.1 |
CDS | 2404..4185 |
Translation |
Target ORF information:
Target ORF information:
|
XM_006239308.3 |
1 | ATGGAGAAAA GCAGTAAAGA ATCTACCTCA CTGGGAACGC CATCATTGCT GACTTCAGAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ORa28856 | |
Clone ID Related Accession (Same CDS sequence) | XM_006239309.2 | |
Accession Version | XM_006239309.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1200bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-07-25 | |
Organism | Rattus norvegicus(Norway rat) | |
Product | protein DDI1 homolog 2 isoform X4 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005104.4) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Aug 7, 2014 this sequence version replaced XM_006239309.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGCTGCTCA CCGTGTACTG TGTGCGGAGG GACCTCTCCG AGGTGACCTT TTCCCTCCAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_006239371.1 |
CDS | 204..1403 |
Translation |
Target ORF information:
Target ORF information:
|
XM_006239309.2 |
1 | ATGCTGCTCA CCGTGTACTG TGTGCGGAGG GACCTCTCCG AGGTGACCTT TTCCCTCCAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ORa28852 | |
Clone ID Related Accession (Same CDS sequence) | XM_006239305.3 | |
Accession Version | XM_006239305.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2961bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-07-25 | |
Organism | Rattus norvegicus(Norway rat) | |
Product | protein DDI1 homolog 2 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005104.4) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jul 26, 2016 this sequence version replaced XM_006239305.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGCTGCTCA CCGTGTACTG TGTGCGGAGG GACCTCTCCG AGGTGACCTT TTCCCTCCAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_006239367.1 |
CDS | 205..3165 |
Translation |
Target ORF information:
Target ORF information:
|
XM_006239305.3 |
1 | ATGCTGCTCA CCGTGTACTG TGTGCGGAGG GACCTCTCCG AGGTGACCTT TTCCCTCCAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ORa28853 | |
Clone ID Related Accession (Same CDS sequence) | XM_006239306.3 | |
Accession Version | XM_006239306.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2952bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-07-25 | |
Organism | Rattus norvegicus(Norway rat) | |
Product | protein DDI1 homolog 2 isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005104.4) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jul 26, 2016 this sequence version replaced XM_006239306.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGTGGCTAT GTCAGGGTGC CGCTGTGTGT TCCATCCCTT CTTCCCCTCA TACTGCTCTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_006239368.1 |
CDS | 518..3469 |
Translation |
Target ORF information:
Target ORF information:
|
XM_006239306.3 |
1 | ATGTGGCTAT GTCAGGGTGC CGCTGTGTGT TCCATCCCTT CTTCCCCTCA TACTGCTCTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Removal of RTF2 from Stalled Replisomes Promotes Maintenance of Genome Integrity. |
Reply to Vangala et al.: Complete inhibition of the proteasome reduces new proteasome production by causing Nrf1 aggregation. |
The aspartyl protease DDI2 activates Nrf1 to compensate for proteasome dysfunction. |
Human DNA-Damage-Inducible 2 Protein Is Structurally and Functionally Distinct from Its Yeast Ortholog. |