Gene Symbol | Utp20 |
Entrez Gene ID | 314713 |
Full Name | UTP20 small subunit processome component |
Synonyms | RGD1560606 |
General protein information |
|
Gene Type | protein-coding |
Organism | Rattus norvegicus(Norway rat) |
Genome |
ORF » Species Summary » Rattus norvegicus » Utp20 cDNA ORF clone
Gene Symbol | Utp20 |
Entrez Gene ID | 314713 |
Full Name | UTP20 small subunit processome component |
Synonyms | RGD1560606 |
General protein information |
|
Gene Type | protein-coding |
Organism | Rattus norvegicus(Norway rat) |
Genome |
mRNA | Protein | Name |
---|---|---|
XM_006241227.3 | XP_006241289.1 | small subunit processome component 20 homolog isoform X1 |
NM_001191779.1 | NP_001178708.1 | small subunit processome component 20 homolog |
Canis lupus familiaris (dog) | UTP20 | XP_532665.2 |
Rattus norvegicus (Norway rat) | Utp20 | NP_001178708.1 |
Gallus gallus (chicken) | UTP20 | XP_004937716.1 |
Pan troglodytes (chimpanzee) | UTP20 | XP_003313968.1 |
Bos taurus (cattle) | UTP20 | XP_003586139.1 |
Anopheles gambiae (African malaria mosquito) | AgaP_AGAP005033 | XP_313900.4 |
Caenorhabditis elegans (roundworm) | tag-184 | NP_495323.1 |
Kluyveromyces lactis | KLLA0E17425g | XP_454735.1 |
Eremothecium gossypii | AGOS_AEL006W | NP_984855.2 |
Xenopus tropicalis (tropical clawed frog) | utp20 | XP_004913232.1 |
Homo sapiens (human) | UTP20 | NP_055318.2 |
UTP20 | XP_001091709.1 | |
Mus musculus (house mouse) | Utp20 | NP_780367.2 |
Danio rerio (zebrafish) | im:7159098 | XP_001920500.3 |
Drosophila melanogaster (fruit fly) | CG4554 | NP_611676.1 |
Schizosaccharomyces pombe (fission yeast) | utp20 | NP_596713.1 |
Saccharomyces cerevisiae (baker's yeast) | UTP20 | NP_009551.2 |
Magnaporthe oryzae (rice blast fungus) | MGG_07737 | XP_003712944.1 |
Neurospora crassa | NCU02494 | XP_965088.2 |
Insights into RNA biology from an atlas of mammalian mRNA-binding proteins.
Castello A, Fischer B, Eichelbaum K, Horos R, Beckmann BM, Strein C, Davey NE, Humphreys DT, Preiss T, Steinmetz LM, Krijgsveld J, Hentze MW
Cell149(6)1393-406(2012 Jun)
The mRNA-bound proteome and its global occupancy profile on protein-coding transcripts.
Baltz AG, Munschauer M, Schwanh?usser B, Vasile A, Murakawa Y, Schueler M, Youngs N, Penfold-Brown D, Drew K, Milek M, Wyler E, Bonneau R, Selbach M, Dieterich C, Landthaler M
Molecular cell46(5)674-90(2012 Jun)
Human 1A6/DRIM, the homolog of yeast Utp20, functions in the 18S rRNA processing.
Wang Y, Liu J, Zhao H, L? W, Zhao J, Yang L, Li N, Du X, Ke Y
Biochimica et biophysica acta1773(6)863-8(2007 Jun)
Mapping nucleolar localization sequences of 1A6/DRIM.
Liu J, Du X, Ke Y
FEBS letters580(5)1405-10(2006 Feb)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following Utp20 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the Utp20 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | ORa07630 | |
Clone ID Related Accession (Same CDS sequence) | NM_001191779.1 | |
Accession Version | NM_001191779.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 8388bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-05-31 | |
Organism | Rattus norvegicus(Norway rat) | |
Product | small subunit processome component 20 homolog | |
Comment | Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from AABR07056545.1. On Jul 17, 2010 this sequence version replaced XM_235023.5. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments. ##Evidence-Data-START## RNAseq introns :: mixed/partial sample support SAMD00052296, SAMD00052297 [ECO:0000350] ##Evidence-Data-END## |
1 | ATGAAGCCAA AGCCAGTTTC CCACAAGACC GAGAACACAT ACCGGTTTCT TACATTTGCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001178708.1 |
CDS | 1..8388 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001191779.1 |
1 | ATGAAGCCAA AGCCAGTTTC CCACAAGACC GAGAACACAT ACCGGTTTCT TACATTTGCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ORa30043 | |
Clone ID Related Accession (Same CDS sequence) | XM_006241227.3 | |
Accession Version | XM_006241227.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 8367bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-07-25 | |
Organism | Rattus norvegicus(Norway rat) | |
Product | small subunit processome component 20 homolog isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005106.4) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jul 26, 2016 this sequence version replaced XM_006241227.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGAAGCCAA AGCCAGTTTC CCACAAGACC GAGAACACAT ACCGGTTTCT TACATTTGCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_006241289.1 |
CDS | 186..8552 |
Translation |
Target ORF information:
Target ORF information:
|
XM_006241227.3 |
1 | ATGAAGCCAA AGCCAGTTTC CCACAAGACC GAGAACACAT ACCGGTTTCT TACATTTGCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Insights into RNA biology from an atlas of mammalian mRNA-binding proteins. |
The mRNA-bound proteome and its global occupancy profile on protein-coding transcripts. |
Human 1A6/DRIM, the homolog of yeast Utp20, functions in the 18S rRNA processing. |
Mapping nucleolar localization sequences of 1A6/DRIM. |