Gene Symbol | Mtmr1 |
Entrez Gene ID | 317296 |
Full Name | myotubularin related protein 1 |
General protein information |
|
Gene Type | protein-coding |
Organism | Rattus norvegicus(Norway rat) |
Genome |
ORF » Species Summary » Rattus norvegicus » Mtmr1 cDNA ORF clone
Gene Symbol | Mtmr1 |
Entrez Gene ID | 317296 |
Full Name | myotubularin related protein 1 |
General protein information |
|
Gene Type | protein-coding |
Organism | Rattus norvegicus(Norway rat) |
Genome |
mRNA | Protein | Name |
---|---|---|
XM_006254380.3 | XP_006254442.1 | myotubularin-related protein 1 isoform X2 |
XM_006254381.3 | XP_006254443.1 | myotubularin-related protein 1 isoform X3 |
XM_017600981.1 | XP_017456470.1 | myotubularin-related protein 1 isoform X5 |
XM_017600977.1 | XP_017456466.1 | myotubularin-related protein 1 isoform X1 |
XM_017600979.1 | XP_017456468.1 | myotubularin-related protein 1 isoform X4 |
NM_001191725.2 | NP_001178654.1 | myotubularin-related protein 1 |
XM_017600978.1 | XP_017456467.1 | myotubularin-related protein 1 isoform X4 |
XM_017600980.1 | XP_017456469.1 | myotubularin-related protein 1 isoform X5 |
MTMR1 | XP_001097388.2 | |
Rattus norvegicus (Norway rat) | Mtmr1 | NP_001178654.1 |
Canis lupus familiaris (dog) | MTMR1 | XP_005641995.1 |
Mus musculus (house mouse) | Mtmr1 | NP_058681.1 |
Gallus gallus (chicken) | MTMR1 | XP_004940911.1 |
Danio rerio (zebrafish) | mtmr1b | NP_001014352.1 |
Pan troglodytes (chimpanzee) | MTMR1 | XP_521304.4 |
Bos taurus (cattle) | MTMR1 | NP_001192996.1 |
Danio rerio (zebrafish) | mtmr1a | NP_001018557.1 |
Xenopus tropicalis (tropical clawed frog) | mtmr1 | NP_001039230.1 |
Homo sapiens (human) | MTMR1 | NP_003819.1 |
Crystal Structure of Human Myotubularin-Related Protein 1 Provides Insight into the Structural Basis of Substrate Specificity.
Bong SM, Son KB, Yang SW, Park JW, Cho JW, Kim KT, Kim H, Kim SJ, Kim YJ, Lee BI
PloS one11(3)e0152611(2016)
Systematic analysis of myotubularins: heteromeric interactions, subcellular localisation and endosome related functions.
Lorenzo O, Urb? S, Clague MJ
Journal of cell science119(Pt 14)2953-9(2006 Jul)
Muscle-specific alternative splicing of myotubularin-related 1 gene is impaired in DM1 muscle cells.
Buj-Bello A, Furling D, Tronch?re H, Laporte J, Lerouge T, Butler-Browne GS, Mandel JL
Human molecular genetics11(19)2297-307(2002 Sep)
Myotubularin and MTMR2, phosphatidylinositol 3-phosphatases mutated in myotubular myopathy and type 4B Charcot-Marie-Tooth disease.
Kim SA, Taylor GS, Torgersen KM, Dixon JE
The Journal of biological chemistry277(6)4526-31(2002 Feb)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following Mtmr1 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the Mtmr1 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | ORa59286 | |
Clone ID Related Accession (Same CDS sequence) | XM_017600979.1 , XM_017600978.1 | |
Accession Version | XM_017600979.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1866bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-07-25 | |
Organism | Rattus norvegicus(Norway rat) | |
Product | myotubularin-related protein 1 isoform X4 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005117.4) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGTCAGGCT CGGTGACGTC AGAAAACGTG TCCAGGGATT ACAAGGTTTT CAGGAGACCA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_017456468.1 |
CDS | 172..2037 |
Translation |
Target ORF information:
Target ORF information:
|
XM_017600979.1 |
1 | ATGTCAGGCT CGGTGACGTC AGAAAACGTG TCCAGGGATT ACAAGGTTTT CAGGAGACCA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ORa59286 | |
Clone ID Related Accession (Same CDS sequence) | XM_017600979.1 , XM_017600978.1 | |
Accession Version | XM_017600978.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1866bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-07-25 | |
Organism | Rattus norvegicus(Norway rat) | |
Product | myotubularin-related protein 1 isoform X4 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005117.4) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGTCAGGCT CGGTGACGTC AGAAAACGTG TCCAGGGATT ACAAGGTTTT CAGGAGACCA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_017456467.1 |
CDS | 426..2291 |
Translation |
Target ORF information:
Target ORF information:
|
XM_017600978.1 |
1 | ATGTCAGGCT CGGTGACGTC AGAAAACGTG TCCAGGGATT ACAAGGTTTT CAGGAGACCA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ORa59287 | |
Clone ID Related Accession (Same CDS sequence) | XM_017600981.1 , XM_017600980.1 | |
Accession Version | XM_017600981.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1716bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-07-25 | |
Organism | Rattus norvegicus(Norway rat) | |
Product | myotubularin-related protein 1 isoform X5 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005117.4) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGAGGAAG CTCCGCTTTT CCCGGGGGAG TCCATTAAGG CCATTGTGAA GGACGTCATC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_017456470.1 |
CDS | 282..1997 |
Translation |
Target ORF information:
Target ORF information:
|
XM_017600981.1 |
1 | ATGGAGGAAG CTCCGCTTTT CCCGGGGGAG TCCATTAAGG CCATTGTGAA GGACGTCATC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ORa59287 | |
Clone ID Related Accession (Same CDS sequence) | XM_017600981.1 , XM_017600980.1 | |
Accession Version | XM_017600980.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1716bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-07-25 | |
Organism | Rattus norvegicus(Norway rat) | |
Product | myotubularin-related protein 1 isoform X5 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005117.4) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGAGGAAG CTCCGCTTTT CCCGGGGGAG TCCATTAAGG CCATTGTGAA GGACGTCATC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_017456469.1 |
CDS | 333..2048 |
Translation |
Target ORF information:
Target ORF information:
|
XM_017600980.1 |
1 | ATGGAGGAAG CTCCGCTTTT CCCGGGGGAG TCCATTAAGG CCATTGTGAA GGACGTCATC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ORa07481 | |
Clone ID Related Accession (Same CDS sequence) | NM_001191725.2 | |
Accession Version | NM_001191725.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1995bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-02-05 | |
Organism | Rattus norvegicus(Norway rat) | |
Product | myotubularin-related protein 1 | |
Comment | Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from AABR07031106.1. On Jul 7, 2012 this sequence version replaced NM_001191725.1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments. ##Evidence-Data-START## RNAseq introns :: mixed/partial sample support SAMD00052296, SAMD00052297 [ECO:0000350] ##Evidence-Data-END## |
1 | ATGGACAGGC CGGGAGCGGC GGCGTCGGGC TGCGAAAGCG CTGCGGGCCC CGGGCCGGGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001178654.1 |
CDS | 97..2091 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001191725.2 |
1 | ATGGACAGGC CGGGAGCGGC GGCGTCGGGC TGCGAAAGCG CTGCGGGCCC CGGGCCGGGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ORa38156 | |
Clone ID Related Accession (Same CDS sequence) | XM_006254380.3 | |
Accession Version | XM_006254380.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2046bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-07-25 | |
Organism | Rattus norvegicus(Norway rat) | |
Product | myotubularin-related protein 1 isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005117.4) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Jul 26, 2016 this sequence version replaced XM_006254380.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGACAGGC CGGGAGCGGC GGCGTCGGGC TGCGAAAGCG CTGCGGGCCC CGGGCCGGGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_006254442.1 |
CDS | 135..2180 |
Translation |
Target ORF information:
Target ORF information:
|
XM_006254380.3 |
1 | ATGGACAGGC CGGGAGCGGC GGCGTCGGGC TGCGAAAGCG CTGCGGGCCC CGGGCCGGGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ORa38157 | |
Clone ID Related Accession (Same CDS sequence) | XM_006254381.3 | |
Accession Version | XM_006254381.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2019bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-07-25 | |
Organism | Rattus norvegicus(Norway rat) | |
Product | myotubularin-related protein 1 isoform X3 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005117.4) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Jul 26, 2016 this sequence version replaced XM_006254381.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGACAGGC CGGGAGCGGC GGCGTCGGGC TGCGAAAGCG CTGCGGGCCC CGGGCCGGGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_006254443.1 |
CDS | 134..2152 |
Translation |
Target ORF information:
Target ORF information:
|
XM_006254381.3 |
1 | ATGGACAGGC CGGGAGCGGC GGCGTCGGGC TGCGAAAGCG CTGCGGGCCC CGGGCCGGGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ORa59285 | |
Clone ID Related Accession (Same CDS sequence) | XM_017600977.1 | |
Accession Version | XM_017600977.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2070bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-07-25 | |
Organism | Rattus norvegicus(Norway rat) | |
Product | myotubularin-related protein 1 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005117.4) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGACAGGC CGGGAGCGGC GGCGTCGGGC TGCGAAAGCG CTGCGGGCCC CGGGCCGGGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_017456466.1 |
CDS | 135..2204 |
Translation |
Target ORF information:
Target ORF information:
|
XM_017600977.1 |
1 | ATGGACAGGC CGGGAGCGGC GGCGTCGGGC TGCGAAAGCG CTGCGGGCCC CGGGCCGGGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Crystal Structure of Human Myotubularin-Related Protein 1 Provides Insight into the Structural Basis of Substrate Specificity. |
Systematic analysis of myotubularins: heteromeric interactions, subcellular localisation and endosome related functions. |
Muscle-specific alternative splicing of myotubularin-related 1 gene is impaired in DM1 muscle cells. |
Myotubularin and MTMR2, phosphatidylinositol 3-phosphatases mutated in myotubular myopathy and type 4B Charcot-Marie-Tooth disease. |