Gene Symbol | Stx16 |
Entrez Gene ID | 362283 |
Full Name | syntaxin 16 |
General protein information |
|
Gene Type | protein-coding |
Organism | Rattus norvegicus(Norway rat) |
Genome |
ORF » Species Summary » Rattus norvegicus » Stx16 cDNA ORF clone
Gene Symbol | Stx16 |
Entrez Gene ID | 362283 |
Full Name | syntaxin 16 |
General protein information |
|
Gene Type | protein-coding |
Organism | Rattus norvegicus(Norway rat) |
Genome |
mRNA | Protein | Name |
---|---|---|
XM_006235694.3 | XP_006235756.1 | syntaxin-16 isoform X2 |
XM_006235693.3 | XP_006235755.1 | syntaxin-16 isoform X1 |
NM_001108610.1 | NP_001102080.1 | syntaxin-16 |
XM_006235696.3 | XP_006235758.1 | syntaxin-16 isoform X4 |
XM_006235695.3 | XP_006235757.1 | syntaxin-16 isoform X3 |
STX16 | XP_002798124.1 | |
Bos taurus (cattle) | STX16 | XP_002692463.1 |
Danio rerio (zebrafish) | stx16 | XP_691316.2 |
Caenorhabditis elegans (roundworm) | syn-16 | NP_498105.1 |
Saccharomyces cerevisiae (baker's yeast) | TLG2 | NP_014624.1 |
Homo sapiens (human) | STX16 | NP_001001433.1 |
Canis lupus familiaris (dog) | STX16 | XP_005635285.1 |
Mus musculus (house mouse) | Stx16 | NP_766263.2 |
Arabidopsis thaliana (thale cress) | SYP42 | NP_567223.1 |
Drosophila melanogaster (fruit fly) | Syx16 | NP_523420.1 |
Magnaporthe oryzae (rice blast fungus) | MGG_06883 | XP_003709612.1 |
Pan troglodytes (chimpanzee) | STX16 | XP_514749.2 |
Rattus norvegicus (Norway rat) | Stx16 | NP_001102080.1 |
Gallus gallus (chicken) | STX16 | NP_001006295.1 |
Eremothecium gossypii | AGOS_AEL026C | NP_984835.2 |
Arabidopsis thaliana (thale cress) | SYP41 | NP_001031950.1 |
Xenopus tropicalis (tropical clawed frog) | LOC100493473 | XP_002943756.2 |
Anopheles gambiae (African malaria mosquito) | AgaP_AGAP000850 | XP_316820.5 |
Kluyveromyces lactis | KLLA0A10681g | XP_451467.1 |
Schizosaccharomyces pombe (fission yeast) | tlg2 | NP_593832.1 |
Neurospora crassa | NCU04119 | XP_961275.2 |
Arabidopsis thaliana (thale cress) | SYP43 | NP_566256.1 |
VAMP4 is required to maintain the ribbon structure of the Golgi apparatus.
Shitara A, Shibui T, Okayama M, Arakawa T, Mizoguchi I, Sakakura Y, Shakakura Y, Takuma T
Molecular and cellular biochemistry380(1-2)11-21(2013 Aug)
Analysis of the myosin-II-responsive focal adhesion proteome reveals a role for ?-Pix in negative regulation of focal adhesion maturation.
Kuo JC, Han X, Hsiao CT, Yates JR 3rd, Waterman CM
Nature cell biology13(4)383-93(2011 Apr)
Dual roles of the mammalian GARP complex in tethering and SNARE complex assembly at the trans-golgi network.
P?rez-Victoria FJ, Bonifacino JS
Molecular and cellular biology29(19)5251-63(2009 Oct)
Sdmg1 is a conserved transmembrane protein associated with germ cell sex determination and germline-soma interactions in mice.
Best D, Sahlender DA, Walther N, Peden AA, Adams IR
Development (Cambridge, England)135(8)1415-25(2008 Apr)
A syntaxin 10-SNARE complex distinguishes two distinct transport routes from endosomes to the trans-Golgi in human cells.
Ganley IG, Espinosa E, Pfeffer SR
The Journal of cell biology180(1)159-72(2008 Jan)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following Stx16 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the Stx16 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | ORa41901 | |
Clone ID Related Accession (Same CDS sequence) | NM_001108610.1 | |
Accession Version | NM_001108610.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 420bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-08-03 | |
Organism | Rattus norvegicus(Norway rat) | |
Product | syntaxin-16 | |
Comment | Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from CH474062.2. On Oct 4, 2007 this sequence version replaced XM_342595.3. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications. ##Evidence-Data-START## CDS exon combination :: EV774443.1 [ECO:0000331] ##Evidence-Data-END## |
1 | ATGAAAAACC GAGAGGAAAG ATCGCAGCAT TTCTTCGACA CCCCGGTACC ACTAATGGAT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001102080.1 |
CDS | 394..813 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001108610.1 |
1 | ATGAAAAACC GAGAGGAAAG ATCGCAGCAT TTCTTCGACA CCCCGGTACC ACTAATGGAT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ORa26752 | |
Clone ID Related Accession (Same CDS sequence) | XM_006235693.3 | |
Accession Version | XM_006235693.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 981bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-07-25 | |
Organism | Rattus norvegicus(Norway rat) | |
Product | syntaxin-16 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005102.4) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Jul 26, 2016 this sequence version replaced XM_006235693.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGCCACCA GGCGTTTAAC CGACGCTTTC TTGTTGTTGC GGAATAATTC CATCCAAAAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_006235755.1 |
CDS | 764..1744 |
Translation |
Target ORF information:
Target ORF information:
|
XM_006235693.3 |
1 | ATGGCCACCA GGCGTTTAAC CGACGCTTTC TTGTTGTTGC GGAATAATTC CATCCAAAAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ORa26753 | |
Clone ID Related Accession (Same CDS sequence) | XM_006235694.3 | |
Accession Version | XM_006235694.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 969bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-07-25 | |
Organism | Rattus norvegicus(Norway rat) | |
Product | syntaxin-16 isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005102.4) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Jul 26, 2016 this sequence version replaced XM_006235694.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGCCACCA GGCGTTTAAC CGACGCTTTC TTGTTGTTGC GGAATAATTC CATCCAAAAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_006235756.1 |
CDS | 764..1732 |
Translation |
Target ORF information:
Target ORF information:
|
XM_006235694.3 |
1 | ATGGCCACCA GGCGTTTAAC CGACGCTTTC TTGTTGTTGC GGAATAATTC CATCCAAAAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ORa26754 | |
Clone ID Related Accession (Same CDS sequence) | XM_006235695.3 | |
Accession Version | XM_006235695.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 930bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-07-25 | |
Organism | Rattus norvegicus(Norway rat) | |
Product | syntaxin-16 isoform X3 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005102.4) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Jul 26, 2016 this sequence version replaced XM_006235695.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGCCACCA GGCGTTTAAC CGACGCTTTC TTGTTGTTGC GGAATAATTC CATCCAAAAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_006235757.1 |
CDS | 763..1692 |
Translation |
Target ORF information:
Target ORF information:
|
XM_006235695.3 |
1 | ATGGCCACCA GGCGTTTAAC CGACGCTTTC TTGTTGTTGC GGAATAATTC CATCCAAAAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ORa26755 | |
Clone ID Related Accession (Same CDS sequence) | XM_006235696.3 | |
Accession Version | XM_006235696.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 918bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-07-25 | |
Organism | Rattus norvegicus(Norway rat) | |
Product | syntaxin-16 isoform X4 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005102.4) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Jul 26, 2016 this sequence version replaced XM_006235696.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGCCACCA GGCGTTTAAC CGACGCTTTC TTGTTGTTGC GGAATAATTC CATCCAAAAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_006235758.1 |
CDS | 763..1680 |
Translation |
Target ORF information:
Target ORF information:
|
XM_006235696.3 |
1 | ATGGCCACCA GGCGTTTAAC CGACGCTTTC TTGTTGTTGC GGAATAATTC CATCCAAAAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
VAMP4 is required to maintain the ribbon structure of the Golgi apparatus. |
Analysis of the myosin-II-responsive focal adhesion proteome reveals a role for ?-Pix in negative regulation of focal adhesion maturation. |
Dual roles of the mammalian GARP complex in tethering and SNARE complex assembly at the trans-golgi network. |
Sdmg1 is a conserved transmembrane protein associated with germ cell sex determination and germline-soma interactions in mice. |
A syntaxin 10-SNARE complex distinguishes two distinct transport routes from endosomes to the trans-Golgi in human cells. |