Gene Symbol | Tra2a |
Entrez Gene ID | 500116 |
Full Name | transformer 2 alpha homolog |
Synonyms | RGD1562563 |
General protein information |
|
Gene Type | protein-coding |
Organism | Rattus norvegicus(Norway rat) |
Genome |
ORF » Species Summary » Rattus norvegicus » Tra2a cDNA ORF clone
Gene Symbol | Tra2a |
Entrez Gene ID | 500116 |
Full Name | transformer 2 alpha homolog |
Synonyms | RGD1562563 |
General protein information |
|
Gene Type | protein-coding |
Organism | Rattus norvegicus(Norway rat) |
Genome |
mRNA | Protein | Name |
---|---|---|
XM_006236466.3 | XP_006236528.1 | transformer-2 protein homolog alpha isoform X3 |
XM_006236464.3 | XP_006236526.1 | transformer-2 protein homolog alpha isoform X1 |
NM_001126296.2 | NP_001119768.2 | transformer-2 protein homolog alpha |
XM_006236465.3 | XP_006236527.1 | transformer-2 protein homolog alpha isoform X2 |
XM_017592792.1 | XP_017448281.1 | transformer-2 protein homolog alpha isoform X4 |
XM_017592791.1 | XP_017448280.1 | transformer-2 protein homolog alpha isoform X4 |
Canis lupus familiaris (dog) | TRA2A | XP_539475.3 |
Danio rerio (zebrafish) | tra2a | NP_956710.1 |
Pan troglodytes (chimpanzee) | TRA2A | XP_001158245.1 |
Mus musculus (house mouse) | Tra2a | NP_932770.2 |
Gallus gallus (chicken) | TRA2A | NP_001006360.1 |
Homo sapiens (human) | TRA2A | NP_037425.1 |
Rattus norvegicus (Norway rat) | Tra2a | NP_001119768.2 |
Xenopus tropicalis (tropical clawed frog) | tra2a | NP_001004819.1 |
TRA2A | XP_001083952.2 | |
Bos taurus (cattle) | TRA2A | NP_001039845.1 |
Insights into RNA biology from an atlas of mammalian mRNA-binding proteins.
Castello A, Fischer B, Eichelbaum K, Horos R, Beckmann BM, Strein C, Davey NE, Humphreys DT, Preiss T, Steinmetz LM, Krijgsveld J, Hentze MW
Cell149(6)1393-406(2012 Jun)
The mRNA-bound proteome and its global occupancy profile on protein-coding transcripts.
Baltz AG, Munschauer M, Schwanh?usser B, Vasile A, Murakawa Y, Schueler M, Youngs N, Penfold-Brown D, Drew K, Milek M, Wyler E, Bonneau R, Selbach M, Dieterich C, Landthaler M
Molecular cell46(5)674-90(2012 Jun)
Identification of evolutionarily conserved exons as regulated targets for the splicing activator tra2? in development.
Grellscheid S, Dalgliesh C, Storbeck M, Best A, Liu Y, Jakubik M, Mende Y, Ehrmann I, Curk T, Rossbach K, Bourgeois CF, St?venin J, Grellscheid D, Jackson MS, Wirth B, Elliott DJ
PLoS genetics7(12)e1002390(2011 Dec)
Cooperative actions of Tra2alpha with 9G8 and SRp30c in the RNA splicing of the gonadotropin-releasing hormone gene transcript.
Park E, Han J, Son GH, Lee MS, Chung S, Park SH, Park K, Lee KH, Choi S, Seong JY, Kim K
The Journal of biological chemistry281(1)401-9(2006 Jan)
Androgens regulate the mammalian homologues of invertebrate sex determination genes tra-2 and fox-1.
Lieberman AP, Friedlich DL, Harmison G, Howell BW, Jordan CL, Breedlove SM, Fischbeck KH
Biochemical and biophysical research communications282(2)499-506(2001 Mar)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following Tra2a gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the Tra2a cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | ORa01441 | |
Clone ID Related Accession (Same CDS sequence) | NM_001126296.2 | |
Accession Version | NM_001126296.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 849bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-05-30 | |
Organism | Rattus norvegicus(Norway rat) | |
Product | transformer-2 protein homolog alpha | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from BC161978.1 and AABR07060532.1. On Mar 28, 2013 this sequence version replaced NM_001126296.1. ##Evidence-Data-START## Transcript exon combination :: BC161978.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMD00052296, SAMN01906347 [ECO:0000348] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. |
1 | ATGAGTGATG TAGAGGAGAA CAACTTCGAG GGCAGAGAGT CTCGCTCTCA GTCAAAATCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001119768.2 |
CDS | 165..1013 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001126296.2 |
1 | ATGAGTGATG TAGAGGAGAA CAACTTCGAG GGCAGAGAGT CTCGCTCTCA GTCAAAATCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ORa27250 | |
Clone ID Related Accession (Same CDS sequence) | XM_006236464.3 | |
Accession Version | XM_006236464.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 846bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-07-25 | |
Organism | Rattus norvegicus(Norway rat) | |
Product | transformer-2 protein homolog alpha isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005103.4) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jul 26, 2016 this sequence version replaced XM_006236464.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGAGTGATG TAGAGGAGAA CAACTTCGAG GGCAGAGAGT CTCGCTCTCA GTCAAAATCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_006236526.1 |
CDS | 187..1032 |
Translation |
Target ORF information:
Target ORF information:
|
XM_006236464.3 |
1 | ATGAGTGATG TAGAGGAGAA CAACTTCGAG GGCAGAGAGT CTCGCTCTCA GTCAAAATCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ORa27251 | |
Clone ID Related Accession (Same CDS sequence) | XM_006236465.3 | |
Accession Version | XM_006236465.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 843bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-07-25 | |
Organism | Rattus norvegicus(Norway rat) | |
Product | transformer-2 protein homolog alpha isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005103.4) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jul 26, 2016 this sequence version replaced XM_006236465.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGAGTGATG TAGAGGAGAA CAACTTCGAG GGCAGAGAGT CTCGCTCTCA GTCAAAATCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_006236527.1 |
CDS | 187..1029 |
Translation |
Target ORF information:
Target ORF information:
|
XM_006236465.3 |
1 | ATGAGTGATG TAGAGGAGAA CAACTTCGAG GGCAGAGAGT CTCGCTCTCA GTCAAAATCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ORa27252 | |
Clone ID Related Accession (Same CDS sequence) | XM_006236466.3 | |
Accession Version | XM_006236466.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 840bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-07-25 | |
Organism | Rattus norvegicus(Norway rat) | |
Product | transformer-2 protein homolog alpha isoform X3 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005103.4) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jul 26, 2016 this sequence version replaced XM_006236466.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGAGTGATG TAGAGGAGAA CAACTTCGAG GGCAGAGAGT CTCGCTCTCA GTCAAAATCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_006236528.1 |
CDS | 187..1026 |
Translation |
Target ORF information:
Target ORF information:
|
XM_006236466.3 |
1 | ATGAGTGATG TAGAGGAGAA CAACTTCGAG GGCAGAGAGT CTCGCTCTCA GTCAAAATCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ORa60963 | |
Clone ID Related Accession (Same CDS sequence) | XM_017592792.1 , XM_017592791.1 | |
Accession Version | XM_017592792.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 552bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-07-25 | |
Organism | Rattus norvegicus(Norway rat) | |
Product | transformer-2 protein homolog alpha isoform X4 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005103.4) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGTCAAACC GCAGAAGGCA CACTGGCAGC AGGGCAAACC CAGATCCTAA CACTTGCCTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_017448281.1 |
CDS | 5670..6221 |
Translation |
Target ORF information:
Target ORF information:
|
XM_017592792.1 |
1 | ATGTCAAACC GCAGAAGGCA CACTGGCAGC AGGGCAAACC CAGATCCTAA CACTTGCCTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ORa60963 | |
Clone ID Related Accession (Same CDS sequence) | XM_017592792.1 , XM_017592791.1 | |
Accession Version | XM_017592791.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 552bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-07-25 | |
Organism | Rattus norvegicus(Norway rat) | |
Product | transformer-2 protein homolog alpha isoform X4 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005103.4) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGTCAAACC GCAGAAGGCA CACTGGCAGC AGGGCAAACC CAGATCCTAA CACTTGCCTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_017448280.1 |
CDS | 1078..1629 |
Translation |
Target ORF information:
Target ORF information:
|
XM_017592791.1 |
1 | ATGTCAAACC GCAGAAGGCA CACTGGCAGC AGGGCAAACC CAGATCCTAA CACTTGCCTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Insights into RNA biology from an atlas of mammalian mRNA-binding proteins. |
The mRNA-bound proteome and its global occupancy profile on protein-coding transcripts. |
Identification of evolutionarily conserved exons as regulated targets for the splicing activator tra2? in development. |
Cooperative actions of Tra2alpha with 9G8 and SRp30c in the RNA splicing of the gonadotropin-releasing hormone gene transcript. |
Androgens regulate the mammalian homologues of invertebrate sex determination genes tra-2 and fox-1. |