Gene Symbol | LOC397459 |
Entrez Gene ID | 397459 |
Full Name | integrin subunit alpha M |
Synonyms | CD11B |
Gene Type | protein-coding |
Organism | Sus scrofa(Pig) |
Genome |
ORF » Species Summary » Sus scrofa » LOC397459 cDNA ORF clone
gRNAs
Gene Symbol | LOC397459 |
Entrez Gene ID | 397459 |
Full Name | integrin subunit alpha M |
Synonyms | CD11B |
Gene Type | protein-coding |
Organism | Sus scrofa(Pig) |
Genome |
mRNA | Protein | Name |
---|---|---|
XM_021086382.1 | XP_020942041.1 | integrin alpha-M isoform X4 |
XM_021086380.1 | XP_020942039.1 | integrin alpha-M isoform X1 |
XM_003124492.6 | XP_003124540.5 | integrin alpha-M isoform X2 |
XM_021086381.1 | XP_020942040.1 | integrin alpha-M isoform X3 |
XM_021086383.1 | XP_020942042.1 | integrin alpha-M isoform X4 |
XM_021086384.1 | XP_020942043.1 | integrin alpha-M isoform X5 |
XM_003124492.5 | XP_003124540.4 | integrin alpha-M |
Molecular cloning, characterization and gene expression of the full length cDNA encoding the porcine CD11b(?M) and chromosomal localization of the porcine CD11a(?L)-CD11b(?M)-CD11b(?D) gene cluster.
Sanz G, Jim?nez-Mar?n ?, Barbancho M, Garrido JJ
Veterinary immunology and immunopathology145(1-2)505-10(2012 Jan)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
molecular cloning, characterization, gene expression and chromosomal localization on region SSC3p15-17
Title: Molecular cloning, characterization and gene expression of the full length cDNA encoding the porcine CD11b(?M) and chromosomal localization of the porcine CD11a(?L)-CD11b(?M)-CD11b(?D) gene cluster.
The following LOC397459 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC397459 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OSe245648 | |
Clone ID Related Accession (Same CDS sequence) | XM_021086380.1 | |
Accession Version | XM_021086380.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 3960bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2017-05-12 | |
Organism | Sus scrofa(pig) | |
Product | integrin alpha-M isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_010445.4) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Sus scrofa Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGTTCTGGA GGCAGGTCCT AGGTCTAGTC CTTGCCTTTC CTGGGGTTTT GGCCGACTCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_020942039.1 |
CDS | 51..4010 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGTTCTGGA GGCAGGTCCT AGGTCTAGTC CTTGCCTTTC CTGGGGTTTT GGCCGACTCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OSe245649 | |
Clone ID Related Accession (Same CDS sequence) | XM_003124492.6 | |
Accession Version | XM_003124492.6 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 3798bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2017-05-12 | |
Organism | Sus scrofa(pig) | |
Product | integrin alpha-M isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_010445.4) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On May 13, 2017 this sequence version replaced XM_003124492.5. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Sus scrofa Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGTTCTGGA GGCAGGTCCT AGGTCTAGTC CTTGCCTTTC CTGGGGTTTT GGCCGACTCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_003124540.5 |
CDS | 47..3844 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGTTCTGGA GGCAGGTCCT AGGTCTAGTC CTTGCCTTTC CTGGGGTTTT GGCCGACTCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OSe245650 | |
Clone ID Related Accession (Same CDS sequence) | XM_021086381.1 | |
Accession Version | XM_021086381.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 3723bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2017-05-12 | |
Organism | Sus scrofa(pig) | |
Product | integrin alpha-M isoform X3 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_010445.4) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Sus scrofa Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGAATGGA GTTTTGTGGT AAGGGTCCTT CCTGCGTTTG GTGGCTTCCT TGAAGTGGCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_020942040.1 |
CDS | 586..4308 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGGAATGGA GTTTTGTGGT AAGGGTCCTT CCTGCGTTTG GTGGCTTCCT TGAAGTGGCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OSe245651 | |
Clone ID Related Accession (Same CDS sequence) | XM_021086382.1 , XM_021086383.1 | |
Accession Version | XM_021086382.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 3621bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2017-05-12 | |
Organism | Sus scrofa(pig) | |
Product | integrin alpha-M isoform X4 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_010445.4) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Sus scrofa Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGACTCACA GAATCCTTCT GCTGACAGCC TTGGCCTTAA GTCATGGGTT CAACCTGGAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_020942041.1 |
CDS | 602..4222 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGACTCACA GAATCCTTCT GCTGACAGCC TTGGCCTTAA GTCATGGGTT CAACCTGGAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OSe245651 | |
Clone ID Related Accession (Same CDS sequence) | XM_021086382.1 , XM_021086383.1 | |
Accession Version | XM_021086383.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 3621bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2017-05-12 | |
Organism | Sus scrofa(pig) | |
Product | integrin alpha-M isoform X4 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_010445.4) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Sus scrofa Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGACTCACA GAATCCTTCT GCTGACAGCC TTGGCCTTAA GTCATGGGTT CAACCTGGAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_020942042.1 |
CDS | 166..3786 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGACTCACA GAATCCTTCT GCTGACAGCC TTGGCCTTAA GTCATGGGTT CAACCTGGAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OSe245652 | |
Clone ID Related Accession (Same CDS sequence) | XM_021086384.1 | |
Accession Version | XM_021086384.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 3459bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2017-05-12 | |
Organism | Sus scrofa(pig) | |
Product | integrin alpha-M isoform X5 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_010445.4) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Sus scrofa Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGACTCACA GAATCCTTCT GCTGACAGCC TTGGCCTTAA GTCATGGGTT CAACCTGGAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_020942043.1 |
CDS | 599..4057 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGACTCACA GAATCCTTCT GCTGACAGCC TTGGCCTTAA GTCATGGGTT CAACCTGGAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OSe33686 | |
Clone ID Related Accession (Same CDS sequence) | XM_003124492.5 | |
Accession Version | XM_003124492.5 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 3459bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2015-09-10 | |
Organism | Sus scrofa(Pig) | |
Product | integrin alpha-M | |
Comment | MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_003609763.1) and transcript sequence (JF709973.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Sep 11, 2015 this sequence version replaced XM_003124492.4. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Sus scrofa Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## ##RefSeq-Attributes-START## assembly gap :: added 1436 transcript bases to patch genome assembly gap ##RefSeq-Attributes-END## |
1 | ATGACTCACA GAATCCTTCT GCTGACAGCC TTGGCCTTAA GTCATGGGTT CAACCTGGAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_003124540.4 |
CDS | 81..3539 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGACTCACA GAATCCTTCT GCTGACAGCC TTGGCCTTAA GTCATGGGTT CAACCTGGAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Molecular cloning, characterization and gene expression of the full length cDNA encoding the porcine CD11b(?M) and chromosomal localization of the porcine CD11a(?L)-CD11b(?M)-CD11b(?D) gene cluster. |