Gene Symbol | vps50 |
Entrez Gene ID | 100135656 |
Full Name | VPS50 EARP/GARPII complex subunit |
Synonyms | ccdc132 |
General protein information |
|
Gene Type | protein-coding |
Organism | Xenopus tropicalis(tropical clawed frog) |
ORF » Species Summary » Xenopus tropicalis » vps50 cDNA ORF clone
Gene Symbol | vps50 |
Entrez Gene ID | 100135656 |
Full Name | VPS50 EARP/GARPII complex subunit |
Synonyms | ccdc132 |
General protein information |
|
Gene Type | protein-coding |
Organism | Xenopus tropicalis(tropical clawed frog) |
mRNA | Protein | Name |
---|---|---|
NM_001016219.2 | NP_001016219.1 | syndetin isoform 2 |
NM_001016219.3 | NP_001016219.1 | syndetin isoform 2 |
NM_001114244.2 | NP_001107716.1 | syndetin isoform 1 |
Homo sapiens (human) | CCDC132 | NP_060137.2 |
Pan troglodytes (chimpanzee) | CCDC132 | XP_519203.3 |
Bos taurus (cattle) | CCDC132 | NP_001098883.1 |
Canis lupus familiaris (dog) | CCDC132 | XP_532460.4 |
Mus musculus (house mouse) | Ccdc132 | NP_077222.4 |
Gallus gallus (chicken) | CCDC132 | NP_001012872.1 |
Arabidopsis thaliana (thale cress) | AT2G27900 | NP_001031433.1 |
Rattus norvegicus (Norway rat) | Ccdc132 | NP_001166982.1 |
Caenorhabditis elegans (roundworm) | C44B9.1 | NP_499394.2 |
Oryza sativa (rice) | Os10g0546300 | NP_001065215.1 |
CCDC132 | XP_001090270.2 | |
Danio rerio (zebrafish) | si:ch211-287b5.1 | XP_001923725.4 |
Drosophila melanogaster (fruit fly) | CG4996 | NP_611258.2 |
Anopheles gambiae (African malaria mosquito) | AgaP_AGAP000343 | XP_310775.5 |
Xenopus tropicalis (tropical clawed frog) | ccdc132 | NP_001107716.1 |
Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative.
Klein SL, Strausberg RL, Wagner L, Pontius J, Clifton SW, Richardson P
Developmental dynamics : an official publication of the American Association of Anatomists225(4)384-91(2002 Dec)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following vps50 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the vps50 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OXa23542 | |
Clone ID Related Accession (Same CDS sequence) | NM_001016219.2 , NM_001016219.3 | |
Accession Version | NM_001016219.2 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 765bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-10-27 | |
Organism | Xenopus tropicalis(tropical clawed frog) | |
Product | syndetin isoform 2 | |
Comment | Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from CR926312.2. On Oct 14, 2005 this sequence version replaced NM_001016219.1. ##Evidence-Data-START## Transcript exon combination :: CR926312.2, EL671871.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA2431826, SAMEA2431828 [ECO:0000348] ##Evidence-Data-END## |
1 | ATGCAGAAGA TCAAGTCCCT AATGACCCGC CAGGGTTCTA AAAGTCCACA GGACAGTTTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001016219.1 |
CDS | 93..857 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001016219.2 |
1 | ATGCAGAAGA TCAAGTCCCT AATGACCCGC CAGGGTTCTA AAAGTCCACA GGACAGTTTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OXa23542 | |
Clone ID Related Accession (Same CDS sequence) | NM_001016219.2 , NM_001016219.3 | |
Accession Version | NM_001016219.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 765bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-12-21 | |
Organism | Xenopus tropicalis(tropical clawed frog) | |
Product | syndetin isoform 2 | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from CX820712.1 and CR926312.2. On Jan 18, 2018 this sequence version replaced NM_001016219.2. ##Evidence-Data-START## Transcript exon combination :: CR926312.2, EL671871.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMD00028290, SAMD00028294 [ECO:0000348] ##Evidence-Data-END## |
1 | ATGCAGAAGA TCAAGTCCCT AATGACCCGC CAGGGTTCTA AAAGTCCACA GGACAGTTTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001016219.1 |
CDS | 107..871 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001016219.3 |
1 | ATGCAGAAGA TCAAGTCCCT AATGACCCGC CAGGGTTCTA AAAGTCCACA GGACAGTTTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OXa20301 | |
Clone ID Related Accession (Same CDS sequence) | NM_001114244.2 | |
Accession Version | NM_001114244.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2895bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2017-09-06 | |
Organism | Xenopus tropicalis(tropical clawed frog) | |
Product | syndetin isoform 1 | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from CX820712.1, BC157528.1, CF591779.1 and AAMC03022671.1. On Sep 23, 2010 this sequence version replaced NM_001114244.1. Sequence Note: This RefSeq record was created from transcript and genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments. ##Evidence-Data-START## Transcript exon combination :: BC157528.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN00861996, SAMN01758126 [ECO:0000348] ##Evidence-Data-END## |
1 | ATGCAGAAGA TCAAGTCCCT AATGACCCGC CAGGGTTCTA AAAGTCCACA GGACAGTTTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001107716.1 |
CDS | 107..3001 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001114244.2 |
1 | ATGCAGAAGA TCAAGTCCCT AATGACCCGC CAGGGTTCTA AAAGTCCACA GGACAGTTTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. |