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LOC100496532 cDNA ORF clone, Xenopus tropicalis(tropical clawed frog)

Summary

Gene Symbol LOC100496532
Entrez Gene ID 100496532
Full Name ficolin-2-like
Gene Type protein-coding
Organism Xenopus tropicalis(tropical clawed frog)

Reference Sequences (RefSeq)

mRNA and Protein(s)

mRNA Protein Name
XM_012969774.1 XP_012825228.1 ficolin-2-like
XM_031890740.1 XP_031746600.1 ficolin-1-B isoform X1
XM_031890741.1 XP_031746601.1 ficolin-1-B isoform X2

Pathways from BioSystems


Homologies


Xenopus tropicalis (tropical clawed frog) col11a2 NP_001005799.1
Xenopus tropicalis (tropical clawed frog) fcn1 NP_001004935.1
Xenopus tropicalis (tropical clawed frog) fcn3 NP_001011233.1
Xenopus tropicalis (tropical clawed frog) LOC100496532 XP_002935134.2
Xenopus tropicalis (tropical clawed frog) LOC100496379 XP_002935133.2
Xenopus tropicalis (tropical clawed frog) fcn3 NP_001006718.1
Xenopus tropicalis (tropical clawed frog) LOC100145014 NP_001120041.1

Gene Ontology

The following LOC100496532 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC100496532 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OXa36597 XM_012969774.1
Latest version!		 Xenopus tropicalis ficolin-2-like (LOC100496532), mRNA. pcDNA3.1+/C-(K)DYK or customized vector 7-9 $174.30
$249.00
OXa63955 XM_031890740.1
Latest version!		 Xenopus tropicalis ficolin-1-B (LOC100496532), transcript variant X1, mRNA. pcDNA3.1+/C-(K)DYK or customized vector 9-11 $223.30
$319.00
OXa63956 XM_031890741.1
Latest version!		 Xenopus tropicalis ficolin-1-B (LOC100496532), transcript variant X2, mRNA. pcDNA3.1+/C-(K)DYK or customized vector 9-11 $139.30
$199.00

ORF Online Only Promotion

Next-day Shipping ORF Clones ( in default vector with tag)
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2-4 Clone 40% OFF
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*Business Day

** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)


CloneID OXa36597
Clone ID Related Accession (Same CDS sequence) XM_012969774.1
Accession Version XM_012969774.1 Latest version! Documents for ORF clone product in default vector
Sequence Information ORF Nucleotide Sequence (Length: 780bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ™ Seamless cloning technology
Insert Structure linear
Update Date 2016-09-07
Organism Xenopus tropicalis(tropical clawed frog)
Product ficolin-2-like
Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_016683412.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Xenopus tropicalis Annotation Release 103 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## ##RefSeq-Attributes-START## ab initio :: 6% of CDS bases ##RefSeq-Attributes-END## 

1
61
121
181
241
301
361
421
481
541
601
661
721
ATGTACCATT TAGAGGTCAT ATACATTTAT ACAGGATTCA CTGGAAACCA AGGAATCCCT 
GGAATCTTGG GCCCCCGTGG TGAGAAAGGA GACATTGGGC CTCCTGGACT CTTGGGGCCA 
CCTGGCGAGA GAGCTTCCAA GAACTGTATG GAGCTGCTCA ATAATGGAGC CACTCTCACC 
GGCTGGTACA CAGTCTATCC GGATGGTAAT AAGCCTATAA ATGTTCTCTG TGACATGGAT 
ACGGATGGAG GGGGATGGAT AGTGTTTCAG AGACGAGTGG ACGGTTCTGT GGATTTTTAC 
AGAGACTGGA AATCCTACAA ACAAGGCTTT GGCAGCCAAC TGGGCGAGTT CTGGTTGGGA 
AATGAGAACA TTCACCTCCT TACGTCCTCA GGGAATTTCC AACTGCGCTT CGACCTGGAG 
GATTTTGACA ACAATCGAAC CTACGCCACT TACAGCCAAT TCCGACTGGA GCCAGAGTCT 
CAGAAATACA CCCTACGTTT TGGAGAATTC ACTGGGGGCC CTGCAGGTGA CTCTCTGGGT 
CCTCACAAGA ACAGAGCATT TAGCACTAAG GATGCAGATA ATGATACAGC CAATGACAGT 
AGCTGTGCAG TATTGTATGT AGGAGCCTGG TGGTACAGTA GCTGCCATAA TTCCAGCCTG 
AATGGGGAAT ACCTGCGGGG CAAGCACAGC AAGAGGGGCA GCGGGGTGCT CTGGCACAAC 
TTCCGAGGGA TTGAGTACTC ACTGAAAGTG TCTGAAATAA AGTTCCGCCC ACAGAAGTAA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq XP_012825228.1
CDS1..780
Translation

Target ORF information:

RefSeq Version XM_012969774.1
Organism Xenopus tropicalis(tropical clawed frog)
Definition Xenopus tropicalis ficolin-2-like (LOC100496532), mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
 XM_012969774.1

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
601
661
721
ATGTACCATT TAGAGGTCAT ATACATTTAT ACAGGATTCA CTGGAAACCA AGGAATCCCT 
GGAATCTTGG GCCCCCGTGG TGAGAAAGGA GACATTGGGC CTCCTGGACT CTTGGGGCCA 
CCTGGCGAGA GAGCTTCCAA GAACTGTATG GAGCTGCTCA ATAATGGAGC CACTCTCACC 
GGCTGGTACA CAGTCTATCC GGATGGTAAT AAGCCTATAA ATGTTCTCTG TGACATGGAT 
ACGGATGGAG GGGGATGGAT AGTGTTTCAG AGACGAGTGG ACGGTTCTGT GGATTTTTAC 
AGAGACTGGA AATCCTACAA ACAAGGCTTT GGCAGCCAAC TGGGCGAGTT CTGGTTGGGA 
AATGAGAACA TTCACCTCCT TACGTCCTCA GGGAATTTCC AACTGCGCTT CGACCTGGAG 
GATTTTGACA ACAATCGAAC CTACGCCACT TACAGCCAAT TCCGACTGGA GCCAGAGTCT 
CAGAAATACA CCCTACGTTT TGGAGAATTC ACTGGGGGCC CTGCAGGTGA CTCTCTGGGT 
CCTCACAAGA ACAGAGCATT TAGCACTAAG GATGCAGATA ATGATACAGC CAATGACAGT 
AGCTGTGCAG TATTGTATGT AGGAGCCTGG TGGTACAGTA GCTGCCATAA TTCCAGCCTG 
AATGGGGAAT ACCTGCGGGG CAAGCACAGC AAGAGGGGCA GCGGGGTGCT CTGGCACAAC 
TTCCGAGGGA TTGAGTACTC ACTGAAAGTG TCTGAAATAA AGTTCCGCCC ACAGAAGTAA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

CloneID OXa63955
Clone ID Related Accession (Same CDS sequence) XM_031890740.1
Accession Version XM_031890740.1 Latest version! Documents for ORF clone product in default vector
Sequence Information ORF Nucleotide Sequence (Length: 1050bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ™ Seamless cloning technology
Insert Structure linear
Update Date 2019-12-17
Organism Xenopus tropicalis(tropical clawed frog)
Product ficolin-1-B isoform X1
Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_030684.2) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Xenopus tropicalis Annotation Release 104 Annotation Version :: 104 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.3 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
ATGGAAAAAC CACCGACCAT GGGAATTTCT CTTCCAAGTC TCTTTTGCCT GATTCTTGTT 
GGGATCACAA TATCCTGCCG TGCCCAAGAC ACGTGTCCTG ATGTAAAACT CATTGGAGTT 
GGAGAATCAG AAAAAATGGC CATTGTAAGA GGGTGTCCCG GGTCTACGGG ATCCCCTGGG 
CAAAAGGGAG AAGCAGGGAC ACAAGGAACC AAAGGGAACC CTGGAATCCC TGGAAAGATG 
GGCCCCCGTG GTGAGAAAGG AGACATTGGG CCTCCTGGAC TCTTGGGGCC ACCTGGCGAG 
AGAGGATTCA CTGGAAACCA AGGAATCCCT GGAATCTTGG GCCCCCGTGG TGAGAAAGGA 
GACATTGGGC CTCCTGGACC CTGGGGGCCA CCTGGCGTGA AAGCTTCCAA GAACTGTATG 
GAGCTGCTCA ATAATGGAGC CACTCTCACC GGCTGGTACA CAGTCTATCC GGATGGTAAT 
AAGCCTATAA ATGTTCTCTG TGACATGGAT ACGGATGGAG GGGGATGGAT AGTGTTTCAG 
AGACGAGTGG ACGGTTCTGT GGATTTTTAC AGAGACTGGA AATCCTACAA ACAAGGCTTT 
GGCAGCCAAC TGGGCGAGTT CTGGTTGGGA AATGAGAACA TTCACCTCCT TACGTCCTCA 
GGGAATTTCC AACTGCGCTT CGACCTGGAG GATTTTGACA ACAATCGAAC CTACGCCACT 
TACAGCCAAT TCCGACTGGA GCCAGAGTCT CAGAAATACA CCCTACGTTT TGGAGAATTC 
ACTGGGGGCC CTGCAGGTGA CTCTCTGGGT CCTCACAAGA ACAGAGCATT TAGCACTAAG 
GATGCAGATA ATGATACAGC CAATGACAGT AGCTGTGCAG TATTGTATGT AGGAGCCTGG 
TGGTACAGTA GCTGCCATAA TTCCAGCCTG AATGGGGAAT ACCTGCGGGG CAAGCACAGC 
AAGAGGGGCA GCGGGGTGCT CTGGCACAAC TTCCGAGGGA TTGAGTACTC ACTGAAAGTG 
TCTGAAATAA AGTTCCGCCC ACAGAAGTAA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq XP_031746600.1
CDS14..1063
Translation

Target ORF information:

RefSeq Version XM_031890740.1
Organism Xenopus tropicalis(tropical clawed frog)
Definition Xenopus tropicalis ficolin-1-B (LOC100496532), transcript variant X1, mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
 XM_031890740.1

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
ATGGAAAAAC CACCGACCAT GGGAATTTCT CTTCCAAGTC TCTTTTGCCT GATTCTTGTT 
GGGATCACAA TATCCTGCCG TGCCCAAGAC ACGTGTCCTG ATGTAAAACT CATTGGAGTT 
GGAGAATCAG AAAAAATGGC CATTGTAAGA GGGTGTCCCG GGTCTACGGG ATCCCCTGGG 
CAAAAGGGAG AAGCAGGGAC ACAAGGAACC AAAGGGAACC CTGGAATCCC TGGAAAGATG 
GGCCCCCGTG GTGAGAAAGG AGACATTGGG CCTCCTGGAC TCTTGGGGCC ACCTGGCGAG 
AGAGGATTCA CTGGAAACCA AGGAATCCCT GGAATCTTGG GCCCCCGTGG TGAGAAAGGA 
GACATTGGGC CTCCTGGACC CTGGGGGCCA CCTGGCGTGA AAGCTTCCAA GAACTGTATG 
GAGCTGCTCA ATAATGGAGC CACTCTCACC GGCTGGTACA CAGTCTATCC GGATGGTAAT 
AAGCCTATAA ATGTTCTCTG TGACATGGAT ACGGATGGAG GGGGATGGAT AGTGTTTCAG 
AGACGAGTGG ACGGTTCTGT GGATTTTTAC AGAGACTGGA AATCCTACAA ACAAGGCTTT 
GGCAGCCAAC TGGGCGAGTT CTGGTTGGGA AATGAGAACA TTCACCTCCT TACGTCCTCA 
GGGAATTTCC AACTGCGCTT CGACCTGGAG GATTTTGACA ACAATCGAAC CTACGCCACT 
TACAGCCAAT TCCGACTGGA GCCAGAGTCT CAGAAATACA CCCTACGTTT TGGAGAATTC 
ACTGGGGGCC CTGCAGGTGA CTCTCTGGGT CCTCACAAGA ACAGAGCATT TAGCACTAAG 
GATGCAGATA ATGATACAGC CAATGACAGT AGCTGTGCAG TATTGTATGT AGGAGCCTGG 
TGGTACAGTA GCTGCCATAA TTCCAGCCTG AATGGGGAAT ACCTGCGGGG CAAGCACAGC 
AAGAGGGGCA GCGGGGTGCT CTGGCACAAC TTCCGAGGGA TTGAGTACTC ACTGAAAGTG 
TCTGAAATAA AGTTCCGCCC ACAGAAGTAA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

CloneID OXa63956
Clone ID Related Accession (Same CDS sequence) XM_031890741.1
Accession Version XM_031890741.1 Latest version! Documents for ORF clone product in default vector
Sequence Information ORF Nucleotide Sequence (Length: 951bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ™ Seamless cloning technology
Insert Structure linear
Update Date 2019-12-17
Organism Xenopus tropicalis(tropical clawed frog)
Product ficolin-1-B isoform X2
Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_030684.2) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Xenopus tropicalis Annotation Release 104 Annotation Version :: 104 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.3 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
ATGGAAAAAC CACCGACCAT GGGAATTTCT CTTCCAAGTC TCTTTTGCCT GATTCTTGTT 
GGGATCACAA TATCCTGCCG TGCCCAAGAC ACGTGTCCTG ATGTAAAACT CATTGGAGTT 
GGAGAATCAG AAAAAATGGC CATTGTAAGA GGGTGTCCCG GGTCTACGGG ATCCCCTGGG 
CAAAAGGGAG AAGCAGGGAC ACAAGGAACC AAAGGGAACC CTGGAATCCC TGGAAAGATG 
GGCCCCCGTG GTGAGAAAGG AGACATTGGG CCTCCTGGAC TCTTGGGGCC ACCTGGCGAG 
AGAGCTTCCA AGAACTGTAT GGAGCTGCTC AATAATGGAG CCACTCTCAC CGGCTGGTAC 
ACAGTCTATC CGGATGGTAA TAAGCCTATA AATGTTCTCT GTGACATGGA TACGGATGGA 
GGGGGATGGA TAGTGTTTCA GAGACGAGTG GACGGTTCTG TGGATTTTTA CAGAGACTGG 
AAATCCTACA AACAAGGCTT TGGCAGCCAA CTGGGCGAGT TCTGGTTGGG AAATGAGAAC 
ATTCACCTCC TTACGTCCTC AGGGAATTTC CAACTGCGCT TCGACCTGGA GGATTTTGAC 
AACAATCGAA CCTACGCCAC TTACAGCCAA TTCCGACTGG AGCCAGAGTC TCAGAAATAC 
ACCCTACGTT TTGGAGAATT CACTGGGGGC CCTGCAGGTG ACTCTCTGGG TCCTCACAAG 
AACAGAGCAT TTAGCACTAA GGATGCAGAT AATGATACAG CCAATGACAG TAGCTGTGCA 
GTATTGTATG TAGGAGCCTG GTGGTACAGT AGCTGCCATA ATTCCAGCCT GAATGGGGAA 
TACCTGCGGG GCAAGCACAG CAAGAGGGGC AGCGGGGTGC TCTGGCACAA CTTCCGAGGG 
ATTGAGTACT CACTGAAAGT GTCTGAAATA AAGTTCCGCC CACAGAAGTA A

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq XP_031746601.1
CDS14..964
Translation

Target ORF information:

RefSeq Version XM_031890741.1
Organism Xenopus tropicalis(tropical clawed frog)
Definition Xenopus tropicalis ficolin-1-B (LOC100496532), transcript variant X2, mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
 XM_031890741.1

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
ATGGAAAAAC CACCGACCAT GGGAATTTCT CTTCCAAGTC TCTTTTGCCT GATTCTTGTT 
GGGATCACAA TATCCTGCCG TGCCCAAGAC ACGTGTCCTG ATGTAAAACT CATTGGAGTT 
GGAGAATCAG AAAAAATGGC CATTGTAAGA GGGTGTCCCG GGTCTACGGG ATCCCCTGGG 
CAAAAGGGAG AAGCAGGGAC ACAAGGAACC AAAGGGAACC CTGGAATCCC TGGAAAGATG 
GGCCCCCGTG GTGAGAAAGG AGACATTGGG CCTCCTGGAC TCTTGGGGCC ACCTGGCGAG 
AGAGCTTCCA AGAACTGTAT GGAGCTGCTC AATAATGGAG CCACTCTCAC CGGCTGGTAC 
ACAGTCTATC CGGATGGTAA TAAGCCTATA AATGTTCTCT GTGACATGGA TACGGATGGA 
GGGGGATGGA TAGTGTTTCA GAGACGAGTG GACGGTTCTG TGGATTTTTA CAGAGACTGG 
AAATCCTACA AACAAGGCTT TGGCAGCCAA CTGGGCGAGT TCTGGTTGGG AAATGAGAAC 
ATTCACCTCC TTACGTCCTC AGGGAATTTC CAACTGCGCT TCGACCTGGA GGATTTTGAC 
AACAATCGAA CCTACGCCAC TTACAGCCAA TTCCGACTGG AGCCAGAGTC TCAGAAATAC 
ACCCTACGTT TTGGAGAATT CACTGGGGGC CCTGCAGGTG ACTCTCTGGG TCCTCACAAG 
AACAGAGCAT TTAGCACTAA GGATGCAGAT AATGATACAG CCAATGACAG TAGCTGTGCA 
GTATTGTATG TAGGAGCCTG GTGGTACAGT AGCTGCCATA ATTCCAGCCT GAATGGGGAA 
TACCTGCGGG GCAAGCACAG CAAGAGGGGC AGCGGGGTGC TCTGGCACAA CTTCCGAGGG 
ATTGAGTACT CACTGAAAGT GTCTGAAATA AAGTTCCGCC CACAGAAGTA A

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

PubMed