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gm2a cDNA ORF clone, Xenopus tropicalis(tropical clawed frog)

Summary

Gene Symbol gm2a
Entrez Gene ID 548463
Full Name GM2 ganglioside activator
General protein information
Preferred Names

GM2 ganglioside activator

Names

ganglioside GM2 activator
GM2 ganglioside activator protein
Gene Type protein-coding
Organism Xenopus tropicalis(tropical clawed frog)

Reference Sequences (RefSeq)

mRNA and Protein(s)

mRNA Protein Name
NM_001017081.2 NP_001017081.1 ganglioside GM2 activator precursor
XM_012958955.2 XP_012814409.1 ganglioside GM2 activator isoform X1

Pathways from BioSystems


Homologies


LOC713375 XP_001109570.1
Canis lupus familiaris (dog) GM2A XP_003639059.1
Homo sapiens (human) GM2A NP_000396.2
Pan troglodytes (chimpanzee) GM2A XP_003950707.1
Bos taurus (cattle) GM2A NP_001192476.1
Gallus gallus (chicken) GM2A XP_003642107.2
Xenopus tropicalis (tropical clawed frog) gm2a NP_001017081.1
Xenopus tropicalis (tropical clawed frog) LOC100495195 XP_002932357.2
Mus musculus (house mouse) Gm2a NP_034429.1
Rattus norvegicus (Norway rat) Gm2a NP_758838.2
Danio rerio (zebrafish) gm2a NP_001017831.1

Gene Ontology


Bibliography

Related articles in PubMed

Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative.
Klein SL, Strausberg RL, Wagner L, Pontius J, Clifton SW, Richardson P
Developmental dynamics : an official publication of the American Association of Anatomists225(4)384-91(2002 Dec)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following gm2a gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the gm2a cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OXa20505 NM_001017081.2
Latest version!		 Xenopus tropicalis GM2 ganglioside activator (gm2a), mRNA. pcDNA3.1-C-(k)DYK or customized vector 7-9 $174.30
$249.00
OXa20505 XM_012958955.2
Latest version!		 Xenopus tropicalis GM2 ganglioside activator (gm2a), transcript variant X1, mRNA. pcDNA3.1-C-(k)DYK or customized vector 7-9 $174.30
$249.00

ORF Online Only Promotion

Next-day Shipping ORF Clones ( in default vector with tag)
1 Clone 30% OFF
2-4 Clone 40% OFF
5 or more Clone 50% OFF
All Other ORF Clones
30% OFF

*Business Day

** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)


CloneID OXa20505
Clone ID Related Accession (Same CDS sequence) NM_001017081.2 , XM_012958955.2
Accession Version NM_001017081.2 Latest version! Documents for ORF clone product in default vector
Sequence Information ORF Nucleotide Sequence (Length: 612bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ™ Seamless cloning technology
Insert Structure linear
Update Date 2019-12-21
Organism Xenopus tropicalis(tropical clawed frog)
Product ganglioside GM2 activator precursor
Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from CR761484.2. On or before Jul 24, 2010 this sequence version replaced NM_001015746.1, NM_001017081.1. ##Evidence-Data-START## Transcript exon combination :: CR761484.2, BC118701.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMD00028290, SAMD00028291 [ECO:0000348] ##Evidence-Data-END## 

1
61
121
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241
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361
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481
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601
ATGGCTCAGC TTTTGTTTTG CTTCCTGTTA ACCTTTGCAG GACTGGGGCA ATTTCCATCT 
GAAGCAACAG CATCAGGAGC ATCGTTGTTC AACTGGAGGT TTCTGTCGGT CAATGGTTTC 
TCCTGGTCCA ACTGTGATGG AGAAAGCCTT CCTGGAAAAA TCAAAAGCCT ATCTGTTAGT 
CCCGACCCTA TTAATATCCC AGGGGACCTG ACTGTTTCTA CAGTTCTTGA AACTAAAGTA 
CCATTGACTT CTCCAGTAAA GGTCATCATC ACTGCCGAAA AGGAGCTATT GGGTGAATGG 
ATGAAGGTTC CCTGCATTGA CAACGTTGGG AGCTGCACCT ATGACAATGT CTGTGAGCTG 
ATTGATACCA TATTTCCACC AGGGCAACAA TGTCCAGAGC CTCTGCGTAC CTATGGCCTT 
CCCTGCCACT GTCCCTTTAA AGAGGGTGTT TATTCTCTCC CTGACACCAC CTTGACTTTA 
CCTGATGTGG ATTTGCCAGC TTGGCTTGCC AATGGTAATT ACCGTGTCAC TGGAGTCCTA 
ATAGCAGACA ACAAGGAGAT TGGCTGCGGC AAATTCACAT TCTCCCTGGA CTCCTCATCC 
TGGTGGTTTT AA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq NP_001017081.1
CDS174..785
Translation

Target ORF information:

RefSeq Version NM_001017081.2
Organism Xenopus tropicalis(tropical clawed frog)
Definition Xenopus tropicalis GM2 ganglioside activator (gm2a), mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
 NM_001017081.2

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
601
ATGGCTCAGC TTTTGTTTTG CTTCCTGTTA ACCTTTGCAG GACTGGGGCA ATTTCCATCT 
GAAGCAACAG CATCAGGAGC ATCGTTGTTC AACTGGAGGT TTCTGTCGGT CAATGGTTTC 
TCCTGGTCCA ACTGTGATGG AGAAAGCCTT CCTGGAAAAA TCAAAAGCCT ATCTGTTAGT 
CCCGACCCTA TTAATATCCC AGGGGACCTG ACTGTTTCTA CAGTTCTTGA AACTAAAGTA 
CCATTGACTT CTCCAGTAAA GGTCATCATC ACTGCCGAAA AGGAGCTATT GGGTGAATGG 
ATGAAGGTTC CCTGCATTGA CAACGTTGGG AGCTGCACCT ATGACAATGT CTGTGAGCTG 
ATTGATACCA TATTTCCACC AGGGCAACAA TGTCCAGAGC CTCTGCGTAC CTATGGCCTT 
CCCTGCCACT GTCCCTTTAA AGAGGGTGTT TATTCTCTCC CTGACACCAC CTTGACTTTA 
CCTGATGTGG ATTTGCCAGC TTGGCTTGCC AATGGTAATT ACCGTGTCAC TGGAGTCCTA 
ATAGCAGACA ACAAGGAGAT TGGCTGCGGC AAATTCACAT TCTCCCTGGA CTCCTCATCC 
TGGTGGTTTT AA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

CloneID OXa20505
Clone ID Related Accession (Same CDS sequence) NM_001017081.2 , XM_012958955.2
Accession Version XM_012958955.2 Latest version! Documents for ORF clone product in default vector
Sequence Information ORF Nucleotide Sequence (Length: 612bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ™ Seamless cloning technology
Insert Structure linear
Update Date 2016-09-07
Organism Xenopus tropicalis(tropical clawed frog)
Product ganglioside GM2 activator isoform X1
Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_030679.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Sep 8, 2016 this sequence version replaced XM_012958955.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Xenopus tropicalis Annotation Release 103 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

1
61
121
181
241
301
361
421
481
541
601
ATGGCTCAGC TTTTGTTTTG CTTCCTGTTA ACCTTTGCAG GACTGGGGCA ATTTCCATCT 
GAAGCAACAG CATCAGGAGC ATCGTTGTTC AACTGGAGGT TTCTGTCGGT CAATGGTTTC 
TCCTGGTCCA ACTGTGATGG AGAAAGCCTT CCTGGAAAAA TCAAAAGCCT ATCTGTTAGT 
CCCGACCCTA TTAATATCCC AGGGGACCTG ACTGTTTCTA CAGTTCTTGA AACTAAAGTA 
CCATTGACTT CTCCAGTAAA GGTCATCATC ACTGCCGAAA AGGAGCTATT GGGTGAATGG 
ATGAAGGTTC CCTGCATTGA CAACGTTGGG AGCTGCACCT ATGACAATGT CTGTGAGCTG 
ATTGATACCA TATTTCCACC AGGGCAACAA TGTCCAGAGC CTCTGCGTAC CTATGGCCTT 
CCCTGCCACT GTCCCTTTAA AGAGGGTGTT TATTCTCTCC CTGACACCAC CTTGACTTTA 
CCTGATGTGG ATTTGCCAGC TTGGCTTGCC AATGGTAATT ACCGTGTCAC TGGAGTCCTA 
ATAGCAGACA ACAAGGAGAT TGGCTGCGGC AAATTCACAT TCTCCCTGGA CTCCTCATCC 
TGGTGGTTTT AA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq XP_012814409.1
CDS292..903
Translation

Target ORF information:

RefSeq Version XM_012958955.2
Organism Xenopus tropicalis(tropical clawed frog)
Definition Xenopus tropicalis GM2 ganglioside activator (gm2a), transcript variant X1, mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
 XM_012958955.2

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
601
ATGGCTCAGC TTTTGTTTTG CTTCCTGTTA ACCTTTGCAG GACTGGGGCA ATTTCCATCT 
GAAGCAACAG CATCAGGAGC ATCGTTGTTC AACTGGAGGT TTCTGTCGGT CAATGGTTTC 
TCCTGGTCCA ACTGTGATGG AGAAAGCCTT CCTGGAAAAA TCAAAAGCCT ATCTGTTAGT 
CCCGACCCTA TTAATATCCC AGGGGACCTG ACTGTTTCTA CAGTTCTTGA AACTAAAGTA 
CCATTGACTT CTCCAGTAAA GGTCATCATC ACTGCCGAAA AGGAGCTATT GGGTGAATGG 
ATGAAGGTTC CCTGCATTGA CAACGTTGGG AGCTGCACCT ATGACAATGT CTGTGAGCTG 
ATTGATACCA TATTTCCACC AGGGCAACAA TGTCCAGAGC CTCTGCGTAC CTATGGCCTT 
CCCTGCCACT GTCCCTTTAA AGAGGGTGTT TATTCTCTCC CTGACACCAC CTTGACTTTA 
CCTGATGTGG ATTTGCCAGC TTGGCTTGCC AATGGTAATT ACCGTGTCAC TGGAGTCCTA 
ATAGCAGACA ACAAGGAGAT TGGCTGCGGC AAATTCACAT TCTCCCTGGA CTCCTCATCC 
TGGTGGTTTT AA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

PubMed

book

Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative.
Developmental dynamics : an official publication of the American Association of Anatomists225(4)384-91(2002 Dec)
Klein SL,Strausberg RL,Wagner L,Pontius J,Clifton SW,Richardson P