Gene Symbol | CHC2 |
Entrez Gene ID | 100193501 |
Full Name | clathrin heavy chain 2 |
Synonyms | GRMZM5G804382 |
Gene Type | protein-coding |
Organism | Zea mays |
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ORF » Species Summary » Zea mays » CHC2 cDNA ORF clone
mRNA | Protein | Name |
---|---|---|
NM_001138615.1 | NP_001132087.1 | uncharacterized protein LOC100193501 |
NM_001358758.1 | NP_001345687.1 | uncharacterized protein LOC100193501 |
XM_008668959.3 | XP_008667181.1 | uncharacterized protein LOC100193501 isoform X1 |
XM_008668959.2 | XP_008667181.1 | uncharacterized protein LOC100193501 isoform X1 |
XM_008668960.2 | XP_008667182.1 | uncharacterized protein LOC100193501 isoform X2 |
Characterization of a gene encoding clathrin heavy chain in maize up-regulated by salicylic acid, abscisic acid and high boron supply.
Zeng MH, Liu SH, Yang MX, Zhang YJ, Liang JY, Wan XR, Liang H
International journal of molecular sciences14(7)15179-98(2013 Jul)
Sequencing, mapping, and analysis of 27,455 maize full-length cDNAs.
Soderlund C, Descour A, Kudrna D, Bomhoff M, Boyd L, Currie J, Angelova A, Collura K, Wissotski M, Ashley E, Morrow D, Fernandes J, Walbot V, Yu Y
PLoS genetics5(11)e1000740(2009 Nov)
Endosperm-preferred expression of maize genes as revealed by transcriptome-wide analysis of expressed sequence tags.
Verza NC, E Silva TR, Neto GC, Nogueira FT, Fisch PH, de Rosa VE Jr, Rebello MM, Vettore AL, da Silva FR, Arruda P
Plant molecular biology59(2)363-74(2005 Sep)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following CHC2 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the CHC2 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OZa21993 | |
Clone ID Related Accession (Same CDS sequence) | NM_001138615.1 | |
Accession Version | NM_001138615.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 957bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2017-04-19 | |
Organism | Zea mays | |
Product | uncharacterized protein LOC100193501 | |
Comment | PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BT035772.1. ##Evidence-Data-START## Transcript exon combination :: BT035772.1, SRR3147028.2648.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN01096209, SAMN03135483 [ECO:0000348] ##Evidence-Data-END## |
1 | ATGAACCACT CTCCTGATGC ATGGGATCAT ATGCAGTTCA AGGATGTTTG CGTTAAAGTT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001132087.1 |
CDS | 77..1033 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGAACCACT CTCCTGATGC ATGGGATCAT ATGCAGTTCA AGGATGTTTG CGTTAAAGTT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OZa23993 | |
Clone ID Related Accession (Same CDS sequence) | NM_001358758.1 , XM_008668960.2 | |
Accession Version | NM_001358758.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 5133bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-03-14 | |
Organism | Zea mays | |
Product | uncharacterized protein LOC100193501 | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from LPUQ01002034.1, KC691697.1, CO451478.1, CD568424.1, DR963737.1 and CA452504.1. On Dec 7, 2017 this sequence version replaced XM_008668960.2. ##Evidence-Data-START## Transcript exon combination :: SRR3147031.10030.1, SRR3147031.10320.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN01096209 [ECO:0000348] ##Evidence-Data-END## |
1 | ATGGCGGCGG CCAACGCTCC CATCGCCATG CGCGAGGCGC TCACGCTCAC CAGCCTGGGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001345687.1 |
CDS | 157..5289 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGGCGGCGG CCAACGCTCC CATCGCCATG CGCGAGGCGC TCACGCTCAC CAGCCTGGGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OZa23992 | |
Clone ID Related Accession (Same CDS sequence) | XM_008668959.3 , XM_008668959.2 | |
Accession Version | XM_008668959.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 5241bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2017-12-17 | |
Organism | Zea mays | |
Product | uncharacterized protein LOC100193501 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_024460.2) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Dec 18, 2017 this sequence version replaced XM_008668959.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Zea mays Annotation Release 102 Annotation Version :: 102 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGCGGCGG CCAACGCTCC CATCGCCATG CGCGAGGCGC TCACGCTCAC CAGCCTGGGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_008667181.1 |
CDS | 184..5424 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGGCGGCGG CCAACGCTCC CATCGCCATG CGCGAGGCGC TCACGCTCAC CAGCCTGGGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OZa23992 | |
Clone ID Related Accession (Same CDS sequence) | XM_008668959.3 , XM_008668959.2 | |
Accession Version | XM_008668959.2 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 5241bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2017-03-19 | |
Organism | Zea mays | |
Product | uncharacterized protein LOC100193501 isoform X1 | |
Comment | MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_024460.2) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Mar 20, 2017 this sequence version replaced XM_008668959.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Zea mays Annotation Release 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.3 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGCGGCGG CCAACGCTCC CATCGCCATG CGCGAGGCGC TCACGCTCAC CAGCCTGGGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_008667181.1 |
CDS | 188..5428 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGGCGGCGG CCAACGCTCC CATCGCCATG CGCGAGGCGC TCACGCTCAC CAGCCTGGGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OZa23993 | |
Clone ID Related Accession (Same CDS sequence) | NM_001358758.1 , XM_008668960.2 | |
Accession Version | XM_008668960.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 5133bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2017-03-19 | |
Organism | Zea mays | |
Product | uncharacterized protein LOC100193501 isoform X2 | |
Comment | MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_024460.2) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Mar 20, 2017 this sequence version replaced XM_008668960.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Zea mays Annotation Release 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.3 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGCGGCGG CCAACGCTCC CATCGCCATG CGCGAGGCGC TCACGCTCAC CAGCCTGGGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_008667182.1 |
CDS | 234..5366 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGGCGGCGG CCAACGCTCC CATCGCCATG CGCGAGGCGC TCACGCTCAC CAGCCTGGGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Characterization of a gene encoding clathrin heavy chain in maize up-regulated by salicylic acid, abscisic acid and high boron supply. |
Sequencing, mapping, and analysis of 27,455 maize full-length cDNAs. |
Endosperm-preferred expression of maize genes as revealed by transcriptome-wide analysis of expressed sequence tags. |