Gene Symbol | LOC100272877 |
Entrez Gene ID | 100272877 |
Full Name | uncharacterized LOC100272877 |
Synonyms | GRMZM2G027331 |
Gene Type | protein-coding |
Organism | Zea mays |
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ORF » Species Summary » Zea mays » LOC100272877 cDNA ORF clone
mRNA | Protein | Name |
---|---|---|
XM_008668866.2 | XP_008667088.1 | uncharacterized protein LOC100272877 isoform X2 |
XM_008668863.2 | XP_008667085.1 | uncharacterized protein LOC100272877 isoform X1 |
NM_001147330.1 | NP_001140802.1 | uncharacterized protein LOC100272877 |
NM_001360155.1 | NP_001347084.1 | uncharacterized protein LOC100272877 |
Characterization of the maize endosperm transcriptome and its comparison to the rice genome.
Lai J, Dey N, Kim CS, Bharti AK, Rudd S, Mayer KF, Larkins BA, Becraft P, Messing J
Genome research14(10A)1932-7(2004 Oct)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following LOC100272877 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC100272877 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OZa10500 | |
Clone ID Related Accession (Same CDS sequence) | NM_001147330.1 | |
Accession Version | NM_001147330.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 717bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2017-04-19 | |
Organism | Zea mays | |
Product | uncharacterized protein LOC100272877 | |
Comment | Comment: PREDICTED REFSEQ: This record has not been reviewed and the function is unknown. The reference sequence was derived from BT039649.1. ##Evidence-Data-START## Transcript exon combination :: BT039649.1, SRR3147052.15259.1 [ECO:0000332] RNAseq introns :: mixed/partial sample support SAMN00780084, SAMN00780085 [ECO:0000350] ##Evidence-Data-END## |
1 | ATGCTGGCAT TATTCTTTGA CAGGATTGGC TGGCCTACAT CTTTGCCAAC TAGTGAGAAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001140802.1 |
CDS | 552..1268 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGCTGGCAT TATTCTTTGA CAGGATTGGC TGGCCTACAT CTTTGCCAAC TAGTGAGAAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OZa25426 | |
Clone ID Related Accession (Same CDS sequence) | XM_008668866.2 , NM_001360155.1 | |
Accession Version | NM_001360155.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1257bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-04-07 | |
Organism | Zea mays | |
Product | uncharacterized protein LOC100272877 | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from DR808543.1 and BT041317.1. On Jan 27, 2018 this sequence version replaced XM_008668866.2. ##Evidence-Data-START## Transcript exon combination :: BT041317.1, SRR3147052.9530.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN01096209 [ECO:0000348] ##Evidence-Data-END## |
1 | ATGGTCCCAC CCACCCATCC ACCCGCACGC CCAGGAGGTG GACCTACCAA TCATCACTGT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001347084.1 |
CDS | 179..1435 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGGTCCCAC CCACCCATCC ACCCGCACGC CCAGGAGGTG GACCTACCAA TCATCACTGT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OZa25425 | |
Clone ID Related Accession (Same CDS sequence) | XM_008668863.2 | |
Accession Version | XM_008668863.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1377bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2017-12-17 | |
Organism | Zea mays | |
Product | uncharacterized protein LOC100272877 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_024459.2) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Mar 20, 2017 this sequence version replaced XM_008668863.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Zea mays Annotation Release 102 Annotation Version :: 102 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGAATCAAA GGAAAATGAG ACGAGGAAGG TGGGGGTGCC GGATGTATCG GACCGGAGAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_008667085.1 |
CDS | 49..1425 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGAATCAAA GGAAAATGAG ACGAGGAAGG TGGGGGTGCC GGATGTATCG GACCGGAGAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OZa25426 | |
Clone ID Related Accession (Same CDS sequence) | XM_008668866.2 , NM_001360155.1 | |
Accession Version | XM_008668866.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1257bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2017-12-17 | |
Organism | Zea mays | |
Product | uncharacterized protein LOC100272877 isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_024459.2) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Mar 20, 2017 this sequence version replaced XM_008668866.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Zea mays Annotation Release 102 Annotation Version :: 102 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGTCCCAC CCACCCATCC ACCCGCACGC CCAGGAGGTG GACCTACCAA TCATCACTGT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_008667088.1 |
CDS | 16..1272 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGGTCCCAC CCACCCATCC ACCCGCACGC CCAGGAGGTG GACCTACCAA TCATCACTGT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Characterization of the maize endosperm transcriptome and its comparison to the rice genome. |