Gene Symbol | ZYP1 |
Entrez Gene ID | 100500741 |
Full Name | ZYP1 protein |
Synonyms | GRMZM2G143590 |
Gene Type | protein-coding |
Organism | Zea mays |
Learn More
Learn More
Learn More
Learn More
Learn More
ORF » Species Summary » Zea mays » ZYP1 cDNA ORF clone
mRNA | Protein | Name |
---|---|---|
NM_001195468.1 | NP_001182397.1 | uncharacterized protein LOC100500741 |
XM_008664056.2 | XP_008662278.1 | ZYP1 protein isoform X1 |
NM_001371425.1 | NP_001358354.1 | uncharacterized protein LOC100500741 |
XM_008664056.3 | XP_008662278.1 | ZYP1 protein isoform X1 |
The synaptonemal complex protein ZYP1 is required for imposition of meiotic crossovers in barley.
Barakate A, Higgins JD, Vivera S, Stephens J, Perry RM, Ramsay L, Colas I, Oakey H, Waugh R, Franklin FC, Armstrong SJ, Halpin C
The Plant cell26(2)729-40(2014 Feb)
Maize meiotic mutants with improper or non-homologous synapsis due to problems in pairing or synaptonemal complex formation.
Golubovskaya IN, Wang CJ, Timofejeva L, Cande WZ
Journal of experimental botany62(5)1533-44(2011 Mar)
Characterization of the maize endosperm transcriptome and its comparison to the rice genome.
Lai J, Dey N, Kim CS, Bharti AK, Rudd S, Mayer KF, Larkins BA, Becraft P, Messing J
Genome research14(10A)1932-7(2004 Oct)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
Barley ZYP1 appears to function similarly to ZIP1/ZYP1 in yeast and Arabidopsis, with an opposite effect on crossover number to ZEP1 in rice, another member of the Poaceae.
Title: The synaptonemal complex protein ZYP1 is required for imposition of meiotic crossovers in barley.
The following ZYP1 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the ZYP1 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OZa21284 | |
Clone ID Related Accession (Same CDS sequence) | NM_001195468.1 | |
Accession Version | NM_001195468.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2604bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-05-18 | |
Organism | Zea mays | |
Product | uncharacterized protein LOC100500741 | |
Comment | Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from HQ116413.1. ##Evidence-Data-START## Transcript exon combination :: HQ116413.1, SRR3147024.15142.1 [ECO:0000332] RNAseq introns :: mixed/partial sample support SAMN00780084, SAMN00780085 [ECO:0000350] ##Evidence-Data-END## |
1 | ATGCAAAAGC ACTCGGGGCT TCGGAGCCTC GAGGGGTTCC GATCCCTCGT TGGATCCACC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001182397.1 |
CDS | 128..2731 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGCAAAAGC ACTCGGGGCT TCGGAGCCTC GAGGGGTTCC GATCCCTCGT TGGATCCACC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OZa71912 | |
Clone ID Related Accession (Same CDS sequence) | NM_001371425.1 | |
Accession Version | NM_001371425.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2604bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-07-13 | |
Organism | Zea mays | |
Product | uncharacterized protein LOC100500741 | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from LPUQ01002348.1, GECR01030235.1, GGGU01022713.1, HQ116413.1, GGGX01007077.1, GGGU01019172.1, DY401328.1 and CA403745.1. ##Evidence-Data-START## Transcript exon combination :: HQ116413.1, SRR3147024.15142.1 [ECO:0000332] RNAseq introns :: mixed/partial sample support SAMN00780084, SAMN00780085 [ECO:0000350] ##Evidence-Data-END## |
1 | ATGCAAAAGC ACTCGGGGCT TCGGAGCCTC GAGGGGTTCC GATCCCTCGT TGGATCCACC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001358354.1 |
CDS | 159..2762 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGCAAAAGC ACTCGGGGCT TCGGAGCCTC GAGGGGTTCC GATCCCTCGT TGGATCCACC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OZa31213 | |
Clone ID Related Accession (Same CDS sequence) | XM_008664056.2 , XM_008664056.3 | |
Accession Version | XM_008664056.2 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2613bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2017-03-19 | |
Organism | Zea mays | |
Product | ZYP1 protein isoform X1 | |
Comment | MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_024468.2) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Mar 20, 2017 this sequence version replaced XM_008664056.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Zea mays Annotation Release 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.3 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGCAAAAGC ACTCGGGGCT TCGGAGCCTC GAGGGGTTCC GATCCCTCGT TGGATCCACC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_008662278.1 |
CDS | 162..2774 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGCAAAAGC ACTCGGGGCT TCGGAGCCTC GAGGGGTTCC GATCCCTCGT TGGATCCACC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OZa31213 | |
Clone ID Related Accession (Same CDS sequence) | XM_008664056.2 , XM_008664056.3 | |
Accession Version | XM_008664056.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2613bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2017-12-17 | |
Organism | Zea mays | |
Product | ZYP1 protein isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_024468.2) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Dec 18, 2017 this sequence version replaced XM_008664056.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Zea mays Annotation Release 102 Annotation Version :: 102 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGCAAAAGC ACTCGGGGCT TCGGAGCCTC GAGGGGTTCC GATCCCTCGT TGGATCCACC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_008662278.1 |
CDS | 161..2773 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGCAAAAGC ACTCGGGGCT TCGGAGCCTC GAGGGGTTCC GATCCCTCGT TGGATCCACC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
The synaptonemal complex protein ZYP1 is required for imposition of meiotic crossovers in barley. |
Maize meiotic mutants with improper or non-homologous synapsis due to problems in pairing or synaptonemal complex formation. |
Characterization of the maize endosperm transcriptome and its comparison to the rice genome. |