Gene Symbol | LOC103643225 |
Entrez Gene ID | 103643225 |
Full Name | thaumatin-like protein 1 |
Synonyms | GRMZM2G049057 |
Gene Type | protein-coding |
Organism | Zea mays |
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ORF » Species Summary » Zea mays » LOC103643225 cDNA ORF clone
mRNA | Protein | Name |
---|---|---|
NM_001364932.1 | NP_001351861.1 | thaumatin-like protein 1 precursor |
XM_023301325.1 | XP_023157093.1 | uncharacterized protein LOC103643225 isoform X2 |
XM_008666379.3 | XP_008664601.1 | thaumatin-like protein 1 isoform X1 |
XM_008666379.2 | XP_008664601.1 | thaumatin-like protein 1b |
Insights into corn genes derived from large-scale cDNA sequencing.
Alexandrov NN, Brover VV, Freidin S, Troukhan ME, Tatarinova TV, Zhang H, Swaller TJ, Lu YP, Bouck J, Flavell RB, Feldmann KA
Plant molecular biology69(1-2)179-94(2009 Jan)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following LOC103643225 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC103643225 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OZa44476 | |
Clone ID Related Accession (Same CDS sequence) | NM_001364932.1 , XM_008666379.3 , XM_008666379.2 | |
Accession Version | NM_001364932.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 960bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-07-16 | |
Organism | Zea mays | |
Product | thaumatin-like protein 1 precursor | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from EE180753.2, GECR01009738.1, GGGX01034659.1, FL472249.1, GGGX01030092.1 and DW741842.1. On Jul 17, 2018 this sequence version replaced XM_008666379.3. ##Evidence-Data-START## RNAseq introns :: mixed/partial sample support SAMN00780084, SAMN00780086 [ECO:0000350] ##Evidence-Data-END## |
1 | ATGGCATCTC GGGCGCACCT GCCGGGCTCG CCGGCCTCGA TCGCCGTCCT CATCCTCTCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001351861.1 |
CDS | 276..1235 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGGCATCTC GGGCGCACCT GCCGGGCTCG CCGGCCTCGA TCGCCGTCCT CATCCTCTCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OZa44476 | |
Clone ID Related Accession (Same CDS sequence) | NM_001364932.1 , XM_008666379.3 , XM_008666379.2 | |
Accession Version | XM_008666379.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 960bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2017-12-17 | |
Organism | Zea mays | |
Product | thaumatin-like protein 1 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_024459.2) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Dec 18, 2017 this sequence version replaced XM_008666379.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Zea mays Annotation Release 102 Annotation Version :: 102 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGCATCTC GGGCGCACCT GCCGGGCTCG CCGGCCTCGA TCGCCGTCCT CATCCTCTCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_008664601.1 |
CDS | 394..1353 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGGCATCTC GGGCGCACCT GCCGGGCTCG CCGGCCTCGA TCGCCGTCCT CATCCTCTCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OZa44476 | |
Clone ID Related Accession (Same CDS sequence) | NM_001364932.1 , XM_008666379.3 , XM_008666379.2 | |
Accession Version | XM_008666379.2 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 960bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2017-03-19 | |
Organism | Zea mays | |
Product | thaumatin-like protein 1b | |
Comment | MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_024459.2) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Mar 20, 2017 this sequence version replaced XM_008666379.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Zea mays Annotation Release 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.3 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGCATCTC GGGCGCACCT GCCGGGCTCG CCGGCCTCGA TCGCCGTCCT CATCCTCTCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_008664601.1 |
CDS | 413..1372 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGGCATCTC GGGCGCACCT GCCGGGCTCG CCGGCCTCGA TCGCCGTCCT CATCCTCTCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OZa69360 | |
Clone ID Related Accession (Same CDS sequence) | XM_023301325.1 | |
Accession Version | XM_023301325.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 906bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2017-12-17 | |
Organism | Zea mays | |
Product | uncharacterized protein LOC103643225 isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_024459.2) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Zea mays Annotation Release 102 Annotation Version :: 102 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGCGGCATC ACGTTCACCT TCACCAACCG CTGCGGCGAC ACGGTGTGGC CGGGCCTGCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_023157093.1 |
CDS | 507..1412 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGCGGCATC ACGTTCACCT TCACCAACCG CTGCGGCGAC ACGGTGTGGC CGGGCCTGCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Insights into corn genes derived from large-scale cDNA sequencing. |