Gene Symbol | LOC103645871 |
Entrez Gene ID | 103645871 |
Full Name | precursor elicitor peptide1 |
Synonyms | GRMZM5G899080,Pep1 |
Gene Type | protein-coding |
Organism | Zea mays |
ORF » Species Summary » Zea mays » LOC103645871 cDNA ORF clone
mRNA | Protein | Name |
---|---|---|
XM_008670579.2 | XP_008668801.1 | uncharacterized protein LOC103645871 isoform X2 |
XM_008670579.3 | XP_008668801.1 | uncharacterized protein LOC103645871 isoform X2 |
XM_008670578.2 | XP_008668800.1 | uncharacterized protein LOC103645871 isoform X1 |
NM_001150666.2 | NP_001144138.2 | uncharacterized protein LOC100276987 |
XM_008670578.3 | XP_008668800.1 | uncharacterized protein LOC103645871 isoform X1 |
Gene discovery and annotation using LCM-454 transcriptome sequencing.
Emrich SJ, Barbazuk WB, Li L, Schnable PS
Genome research17(1)69-73(2007 Jan)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following LOC103645871 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC103645871 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OZa46495 | |
Clone ID Related Accession (Same CDS sequence) | XM_008670578.2 , NM_001150666.2 , XM_008670578.3 | |
Accession Version | NM_001150666.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 429bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-06-09 | |
Organism | Zea mays | |
Product | uncharacterized protein LOC100276987 | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from FL043154.1, DY240150.1 and DW868624.1. On or before Jun 5, 2018 this sequence version replaced XM_008670578.3, NM_001150666.1. ##Evidence-Data-START## Transcript exon combination :: SRR3147039.5455.1, SRR3147033.9411.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN00780084, SAMN00780085 [ECO:0000348] ##Evidence-Data-END## |
1 | ATGGATGAGC GCGGGGAGAA GGAGGAGGAG CACGGAGTAG TGGAGGAGGA GACGGCGGCG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001144138.2 |
CDS | 247..675 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGGATGAGC GCGGGGAGAA GGAGGAGGAG CACGGAGTAG TGGAGGAGGA GACGGCGGCG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OZa46495 | |
Clone ID Related Accession (Same CDS sequence) | XM_008670578.2 , NM_001150666.2 , XM_008670578.3 | |
Accession Version | XM_008670578.2 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 429bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2017-03-19 | |
Organism | Zea mays | |
Product | uncharacterized protein LOC103645871 isoform X1 | |
Comment | MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_024460.2) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Mar 20, 2017 this sequence version replaced XM_008670578.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Zea mays Annotation Release 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.3 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGATGAGC GCGGGGAGAA GGAGGAGGAG CACGGAGTAG TGGAGGAGGA GACGGCGGCG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_008668800.1 |
CDS | 260..688 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGGATGAGC GCGGGGAGAA GGAGGAGGAG CACGGAGTAG TGGAGGAGGA GACGGCGGCG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OZa46495 | |
Clone ID Related Accession (Same CDS sequence) | XM_008670578.2 , NM_001150666.2 , XM_008670578.3 | |
Accession Version | XM_008670578.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 429bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2017-12-17 | |
Organism | Zea mays | |
Product | uncharacterized protein LOC103645871 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_024460.2) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Dec 18, 2017 this sequence version replaced XM_008670578.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Zea mays Annotation Release 102 Annotation Version :: 102 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGATGAGC GCGGGGAGAA GGAGGAGGAG CACGGAGTAG TGGAGGAGGA GACGGCGGCG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_008668800.1 |
CDS | 258..686 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGGATGAGC GCGGGGAGAA GGAGGAGGAG CACGGAGTAG TGGAGGAGGA GACGGCGGCG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OZa46496 | |
Clone ID Related Accession (Same CDS sequence) | XM_008670579.2 , XM_008670579.3 | |
Accession Version | XM_008670579.2 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 414bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2017-03-19 | |
Organism | Zea mays | |
Product | uncharacterized protein LOC103645871 isoform X2 | |
Comment | MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_024460.2) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Mar 20, 2017 this sequence version replaced XM_008670579.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Zea mays Annotation Release 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.3 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGATGAGC GCGGGGAGAA GGAGGAGGAG CACGGAGTAG TGGAGGAGGA GACGGCGGCG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_008668801.1 |
CDS | 261..674 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGGATGAGC GCGGGGAGAA GGAGGAGGAG CACGGAGTAG TGGAGGAGGA GACGGCGGCG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OZa46496 | |
Clone ID Related Accession (Same CDS sequence) | XM_008670579.2 , XM_008670579.3 | |
Accession Version | XM_008670579.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 414bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2017-12-17 | |
Organism | Zea mays | |
Product | uncharacterized protein LOC103645871 isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_024460.2) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Dec 18, 2017 this sequence version replaced XM_008670579.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Zea mays Annotation Release 102 Annotation Version :: 102 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGATGAGC GCGGGGAGAA GGAGGAGGAG CACGGAGTAG TGGAGGAGGA GACGGCGGCG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_008668801.1 |
CDS | 258..671 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGGATGAGC GCGGGGAGAA GGAGGAGGAG CACGGAGTAG TGGAGGAGGA GACGGCGGCG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Gene discovery and annotation using LCM-454 transcriptome sequencing. |