Gene Symbol | LOC103647175 |
Entrez Gene ID | 103647175 |
Full Name | SNF1-related protein kinase catalytic subunit alpha KIN10-like |
Synonyms | GRMZM2G180704,kin2 |
Gene Type | protein-coding |
Organism | Zea mays |
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ORF » Species Summary » Zea mays » LOC103647175 cDNA ORF clone
mRNA | Protein | Name |
---|---|---|
XM_008671744.2 | XP_008669966.1 | SNF1-related protein kinase catalytic subunit alpha KIN10-like isoform X1 |
XM_008671746.3 | XP_008669968.1 | SNF1-related protein kinase catalytic subunit alpha KIN10-like isoform X3 |
XM_020547986.1 | XP_020403575.1 | SNF1-related protein kinase catalytic subunit alpha KIN10-like isoform X3 |
XM_020547986.2 | XP_020403575.1 | SNF1-related protein kinase catalytic subunit alpha KIN10-like isoform X4 |
XM_008671746.2 | XP_008669968.1 | SNF1-related protein kinase catalytic subunit alpha KIN10-like isoform X2 |
XM_023301562.1 | XP_023157330.1 | SNF1-related protein kinase catalytic subunit alpha KIN10-like isoform X2 |
NM_001301590.1 | NP_001288519.1 | SNF1-related protein kinase catalytic subunit alpha KIN10-like |
Deep sampling of the Palomero maize transcriptome by a high throughput strategy of pyrosequencing.
Vega-Arregu?n JC, Ibarra-Laclette E, Jim?nez-Moraila B, Mart?nez O, Vielle-Calzada JP, Herrera-Estrella L, Herrera-Estrella A
BMC genomics10299(2009 Jul)
Insights into corn genes derived from large-scale cDNA sequencing.
Alexandrov NN, Brover VV, Freidin S, Troukhan ME, Tatarinova TV, Zhang H, Swaller TJ, Lu YP, Bouck J, Flavell RB, Feldmann KA
Plant molecular biology69(1-2)179-94(2009 Jan)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following LOC103647175 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC103647175 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OZa47401 | |
Clone ID Related Accession (Same CDS sequence) | NM_001301590.1 | |
Accession Version | NM_001301590.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1500bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2017-04-23 | |
Organism | Zea mays | |
Product | SNF1-related protein kinase catalytic subunit alpha KIN10-like | |
Comment | Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from EU961757.1. On Aug 21, 2014 this sequence version replaced XM_008671745.1. ##Evidence-Data-START## Transcript exon combination :: EU961757.1, SRR3147023.2451.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN00780084, SAMN00780085 [ECO:0000348] ##Evidence-Data-END## |
1 | ATGGAGGGGG CAGGCAAGGA TGGCAACCCG TTGAGGAATT ATCGGATTGG CAAGACTCTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001288519.1 |
CDS | 220..1719 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGGAGGGGG CAGGCAAGGA TGGCAACCCG TTGAGGAATT ATCGGATTGG CAAGACTCTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OZa47399 | |
Clone ID Related Accession (Same CDS sequence) | XM_008671744.2 | |
Accession Version | XM_008671744.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1563bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2017-12-17 | |
Organism | Zea mays | |
Product | SNF1-related protein kinase catalytic subunit alpha KIN10-like isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_024460.2) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Mar 20, 2017 this sequence version replaced XM_008671744.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Zea mays Annotation Release 102 Annotation Version :: 102 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGACGAAC CAGCTGGATC TGGCCTGCTC AAATGGAACC GCGAGCTTTC ATTGCGCCTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_008669966.1 |
CDS | 16..1578 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGGACGAAC CAGCTGGATC TGGCCTGCTC AAATGGAACC GCGAGCTTTC ATTGCGCCTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OZa47400 | |
Clone ID Related Accession (Same CDS sequence) | XM_008671746.3 , XM_008671746.2 | |
Accession Version | XM_008671746.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1500bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2017-12-17 | |
Organism | Zea mays | |
Product | SNF1-related protein kinase catalytic subunit alpha KIN10-like isoform X3 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_024460.2) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Dec 18, 2017 this sequence version replaced XM_008671746.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Zea mays Annotation Release 102 Annotation Version :: 102 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGAGGGGG CAGGCAAGGA TGGCAACCCG TTGAGGAATT ATCGGATTGG CAAGACTCTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_008669968.1 |
CDS | 107..1606 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGGAGGGGG CAGGCAAGGA TGGCAACCCG TTGAGGAATT ATCGGATTGG CAAGACTCTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OZa47400 | |
Clone ID Related Accession (Same CDS sequence) | XM_008671746.3 , XM_008671746.2 | |
Accession Version | XM_008671746.2 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1500bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2017-03-19 | |
Organism | Zea mays | |
Product | SNF1-related protein kinase catalytic subunit alpha KIN10-like isoform X2 | |
Comment | MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_024460.2) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Mar 20, 2017 this sequence version replaced XM_008671746.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Zea mays Annotation Release 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.3 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGAGGGGG CAGGCAAGGA TGGCAACCCG TTGAGGAATT ATCGGATTGG CAAGACTCTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_008669968.1 |
CDS | 94..1593 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGGAGGGGG CAGGCAAGGA TGGCAACCCG TTGAGGAATT ATCGGATTGG CAAGACTCTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OZa57387 | |
Clone ID Related Accession (Same CDS sequence) | XM_020547986.1 , XM_020547986.2 | |
Accession Version | XM_020547986.1 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1350bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2017-03-19 | |
Organism | Zea mays | |
Product | SNF1-related protein kinase catalytic subunit alpha KIN10-like isoform X3 | |
Comment | MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_024460.2) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Zea mays Annotation Release 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.3 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGACGAAC CAGCTGGATC TGGCCTGCTC AAATGGAACC GCGAGCTTTC ATTGCGCCTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_020403575.1 |
CDS | 16..1365 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGGACGAAC CAGCTGGATC TGGCCTGCTC AAATGGAACC GCGAGCTTTC ATTGCGCCTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OZa57387 | |
Clone ID Related Accession (Same CDS sequence) | XM_020547986.1 , XM_020547986.2 | |
Accession Version | XM_020547986.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1350bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2017-12-17 | |
Organism | Zea mays | |
Product | SNF1-related protein kinase catalytic subunit alpha KIN10-like isoform X4 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_024460.2) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Dec 18, 2017 this sequence version replaced XM_020547986.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Zea mays Annotation Release 102 Annotation Version :: 102 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGACGAAC CAGCTGGATC TGGCCTGCTC AAATGGAACC GCGAGCTTTC ATTGCGCCTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_020403575.1 |
CDS | 16..1365 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGGACGAAC CAGCTGGATC TGGCCTGCTC AAATGGAACC GCGAGCTTTC ATTGCGCCTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OZa69563 | |
Clone ID Related Accession (Same CDS sequence) | XM_023301562.1 | |
Accession Version | XM_023301562.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1512bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2017-12-17 | |
Organism | Zea mays | |
Product | SNF1-related protein kinase catalytic subunit alpha KIN10-like isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_024460.2) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Zea mays Annotation Release 102 Annotation Version :: 102 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGCGGCAGA GGATGGAGGG GGCAGGCAAG GATGGCAACC CGTTGAGGAA TTATCGGATT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_023157330.1 |
CDS | 16..1527 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGCGGCAGA GGATGGAGGG GGCAGGCAAG GATGGCAACC CGTTGAGGAA TTATCGGATT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Deep sampling of the Palomero maize transcriptome by a high throughput strategy of pyrosequencing. |
Insights into corn genes derived from large-scale cDNA sequencing. |