Gene Symbol | LOC542709 |
Entrez Gene ID | 542709 |
Full Name | MADS box protein |
Synonyms | GRMZM2G003514 |
Gene Type | protein-coding |
Organism | Zea mays |
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ORF » Species Summary » Zea mays » LOC542709 cDNA ORF clone
mRNA | Protein | Name |
---|---|---|
XM_008679575.2 | XP_008677797.1 | MADS box protein isoform X1 |
NM_001112222.1 | NP_001105692.1 | MADS box protein |
XM_008679575.3 | XP_008677797.1 | MADS box protein isoform X1 |
NM_001112222.2 | NP_001105692.2 | MADS box protein |
A characterization of the MADS-box gene family in maize.
Mena M, Mandel MA, Lerner DR, Yanofsky MF, Schmidt RJ
The Plant journal : for cell and molecular biology8(6)845-54(1995 Dec)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following LOC542709 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC542709 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OZa12391 | |
Clone ID Related Accession (Same CDS sequence) | NM_001112222.1 | |
Accession Version | NM_001112222.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 768bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2017-04-21 | |
Organism | Zea mays | |
Product | MADS box protein | |
Comment | PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from L46398.1. ##Evidence-Data-START## Transcript exon combination :: L46398.1, BT087751.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN00780151, SAMN00780152 [ECO:0000348] ##Evidence-Data-END## |
1 | ATGGGGAGGG GACGCGTCGA GCTGAAGCGG ATCGAGAACA AGATCAACCG CCAGGTCACC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001105692.1 |
CDS | 202..969 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGGGGAGGG GACGCGTCGA GCTGAAGCGG ATCGAGAACA AGATCAACCG CCAGGTCACC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OZa22667 | |
Clone ID Related Accession (Same CDS sequence) | XM_008679575.2 , XM_008679575.3 | |
Accession Version | XM_008679575.2 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 825bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2017-03-19 | |
Organism | Zea mays | |
Product | MADS box protein isoform X1 | |
Comment | MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_024462.2) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Mar 20, 2017 this sequence version replaced XM_008679575.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Zea mays Annotation Release 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.3 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGGGAGGG GACGCGTCGA GCTGAAGCGG ATCGAGAACA AGATCAACCG CCAGGTCACC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_008677797.1 |
CDS | 228..1052 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGGGGAGGG GACGCGTCGA GCTGAAGCGG ATCGAGAACA AGATCAACCG CCAGGTCACC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OZa22667 | |
Clone ID Related Accession (Same CDS sequence) | XM_008679575.2 , XM_008679575.3 | |
Accession Version | XM_008679575.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 825bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2017-12-17 | |
Organism | Zea mays | |
Product | MADS box protein isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_024462.2) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Dec 18, 2017 this sequence version replaced XM_008679575.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Zea mays Annotation Release 102 Annotation Version :: 102 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGGGAGGG GACGCGTCGA GCTGAAGCGG ATCGAGAACA AGATCAACCG CCAGGTCACC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_008677797.1 |
CDS | 215..1039 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGGGGAGGG GACGCGTCGA GCTGAAGCGG ATCGAGAACA AGATCAACCG CCAGGTCACC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OZa70623 | |
Clone ID Related Accession (Same CDS sequence) | NM_001112222.2 | |
Accession Version | NM_001112222.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 768bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-03-06 | |
Organism | Zea mays | |
Product | MADS box protein | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from EE026873.2 and BT087751.1. On May 27, 2017 this sequence version replaced NM_001112222.1. ##Evidence-Data-START## Transcript exon combination :: BT087751.1, SRR3147052.2239.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN00780151, SAMN00780152 [ECO:0000348] ##Evidence-Data-END## |
1 | ATGGGGAGGG GACGCGTCGA GCTGAAGCGG ATCGAGAACA AGATCAACCG CCAGGTCACC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001105692.2 |
CDS | 129..896 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGGGGAGGG GACGCGTCGA GCTGAAGCGG ATCGAGAACA AGATCAACCG CCAGGTCACC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
A characterization of the MADS-box gene family in maize. |