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Reviewed (UniProtKB/Swiss-Prot)

Note: Proteins listed in ProtBank™ database are NOT off-the-shelf [catalog] proteins. Customized protein production request can be made for any protein in this database by clicking on the corresponding button under "Quick Quote". Please ensure sequence accuracy and/or make any necessary modifications prior to submitting your quote request

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Reviewed (UniProtKB/Swiss-Prot)


Name Gene Symbol Rec Full Name Protein Information Quick Quote  Price,
Turnaround
SOBP_BOVIN, Bos taurus (cattle) SOBP Jackson circler protein 1 Functions
wild_type
Starting from $1920,
5 weeks
Protein Domains
mutant
Quote

Protein Names | ProteinIDs  | Organism | Gene Names  | GeneID | Genome Annotation(Ensembl) |  Protein Sequence | 
General annotation |  References | Order
Protein Names
Recommended name:
 Sine oculis-binding protein homolog;
Alternative name(s):
 Jackson circler protein 1
Protein IDs
(Accession numbers)
UniProtKB
 A7XYH9
NCBI RefSeq

NP_001094640.2, NM_001101170.2.
Organism
Latin Name/
(Common Name)
Bos taurus (Bovine).
Taxonomic Identifier (NCBI)
 9913
Gene Names
 SOBP [GenPool]
GeneID

537433
Genome
Annotation (Ensembl)

ENSBTAT00000025519, ENSBTAP00000025519; ENSBTAG00000019175
Protein Sequence
 
SEQUENCE   872 AA;  92469 MW;  F7DBFE8FC98FDA8A CRC64;
MAEMEKEGRP PENKRSRKPA HPVKREINEE MKNFAENTMN ELLGWYGYDK VELKDGEDIE
FRSYPTDGES RQHISVLKEN SLPKPKLPED SVISPYNIST GYSGLATGNG LSDSPAGSKD
HGNVPIIVPL IPPPFIKPPA EDDVSNVQIM CAWCQKVGIK RYSLSMGSEV KSFCSEKCFA
ACRRAYFKRN KARDEDGHAE NFPQQHYAKE TPRLAFKNNC ELLVCDWCKH IRHTKEYLDF
GDGERRLQFC SAKCLNQYKM DIFYKETQAN LPAGLCSTLH PPMENKTEGT GVQLLTPDSW
NIPLTDARRK APSPVAAAGQ SQGPGPSAST TVSPSDTANC SVTKIPTPVP KSMPISETPN
IPPVSVQPPA SIGPPLGVPP RSPPMVMTNR GPVPLPIFME QQIMQQLRPP FIRGPPHHAS
NPNSPLSNPM LPGIGPPPGG PRNLGPTSSP MHRPLLSPHI HPPSTPTMPG NPPGLLPPPP
PGAPLPSLPF PPVSMMPNGP MPVPQMMNFG LPSLAPLVPP PTLLVPYPVI VPLPVPIPIP
IPVPHVSDSK PPNGFSSNGE NFIPSAPGDS SAAGGKPGGH SLSPRDSKQG SSKSADSPPG
CSGQALSLAP APAEHGRSEV VDLTRRAGSP PGAGGQLGFP GGVLQGPQDG VIDLTVGHRA
RLHNVIHRAL HAHVKAEREP GAAERRTCGG CRDGHCSPPA AGDPGPGAPA GPEAAAACNV
IVNGTRGAAE GAKGAEPPPE QPPPPPPPPP APPKKLLSPE EPAVSELESV KENNCASNCH
LDGEAAKKLM GEEALAGGDK SDPNLNNPAD EDHAYALRML PKTGCVIQPV PKPAEKAAMA
PCIISSPMLS AGPEDLEPPL KRRCLRIRNQ NK
General annotation
Function
 Implicated in development of the cochlea (By similarity).
Cofactor
Subunit structure
Subcellular location

Tissue specificity
Induction
Domain
Post-translational modification

Involvement in disease

References

  • "Mutations in Jxc1 are associated with deafness, vestibular deficitsand cochlea malformation in the Jackson circler (jc) mutant mouse.";,Noben-Trauth K.;,Submitted (APR-2006) to the EMBL/GenBank/DDBJ databases.

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Protein Domain Databases | 3D Structure Database  | Sequence Annotation | Protein-protein Interaction Databases  | 
Binary Interactions | Enzyme and Pathway Databases |  Phylogenomic Database | Proteomics Database | 
Comparative Toxicogenomics Database | Order
Protein Domain Databases
InterPro
Gene3D
PANTHER
Pfam
PRINTS
SUPFAM
PROSITE

PS51024, ZF_FCS; FALSE_NEG.
3D Structure
Database (PDB)
Entry
Method
Resolution (A)
Chain
Positions
PDBsum
Sequence
Annotation
Feature key
Position(s)
Length
Description
Polypeptide chain 1 - 872 872 Sine oculis-binding protein homolog. /FTId=PRO_0000312231.
Zinc finger region 142 - 180 39 FCS-type 1.
Zinc finger region 216 - 256 41 FCS-type 2.
Compositionally biased region 346 - 552 207 Pro-rich.
Compositionally biased region 737 - 762 26 Pro-rich.
Protein-protein
Interaction
Databases
DIP
IntAct
MINT
STRING
Binary Interactions
With
Entry
#Exp.
IntAct
Enzyme and Pathway Databases
Pathway
Interaction DB
Reactome
Phylogenomic Database
HOVERGEN

HBG062766
InParanoid

A7XYH9
OMA

EHGRSEV
OrthoDB

EOG4GF3DV
Proteomics
Database (PRIDE)

A7XYH9
Comparative
Toxicogenomics
Database (CTD)

55084
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