HipHop cDNA ORF clone, Drosophila melanogaster(fruit fly)

Gene
Clones
gRNAs

Summary

Gene Symbol	HipHop
Entrez Gene ID	40047
Full Name	HP1-HOAP-interacting protein
Synonyms	BcDNA:RE10558,CG6874,Dmel\CG6874,HIPHOP,Hiphop,hiphop,l(3)neo26
General protein information	Preferred Names HP1-HOAP-interacting protein Names CG6874 gene product from transcript CG6874-RB CG6874-PA CG6874-PB HP1 and HOAP-interacting protein HP1-HOAP interacting protein HipHop-PA HipHop-PB l(3)neo26 lethal (3) neo26
Gene Type	protein-coding
Organism	Drosophila melanogaster(fruit fly)
Genome	Chromosome: 3L Map Location: 75E1-75E1

mRNA and Protein(s)

mRNA	Protein	Name
NM_140804.3	NP_649061.1	HP1-HOAP-interacting protein, isoform A
NM_168777.2	NP_730362.1	HP1-HOAP-interacting protein, isoform B

Pathways from BioSystems
Gene Ontology
Bibliography

Related articles in PubMed

Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data.
Matthews BB, Dos Santos G, Crosby MA, Emmert DB, St Pierre SE, Gramates LS, Zhou P, Schroeder AJ, Falls K, Strelets V, Russo SM, Gelbart WM,
G3 (Bethesda, Md.)5(8)1721-36(2015 Jun)

Gene Model Annotations for Drosophila melanogaster: The Rule-Benders.
Crosby MA, Gramates LS, Dos Santos G, Matthews BB, St Pierre SE, Zhou P, Schroeder AJ, Falls K, Emmert DB, Russo SM, Gelbart WM,
G3 (Bethesda, Md.)5(8)1737-49(2015 Jun)

Sequence finishing and mapping of Drosophila melanogaster heterochromatin.
Hoskins RA, Carlson JW, Kennedy C, Acevedo D, Evans-Holm M, Frise E, Wan KH, Park S, Mendez-Lago M, Rossi F, Villasante A, Dimitri P, Karpen GH, Celniker SE
Science (New York, N.Y.)316(5831)1625-8(2007 Jun)

The Release 5.1 annotation of Drosophila melanogaster heterochromatin.
Smith CD, Shu S, Mungall CJ, Karpen GH
Science (New York, N.Y.)316(5831)1586-91(2007 Jun)

Combined evidence annotation of transposable elements in genome sequences.
Quesneville H, Bergman CM, Andrieu O, Autard D, Nouaud D, Ashburner M, Anxolabehere D
PLoS computational biology1(2)166-75(2005 Jul)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following HipHop gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the HipHop cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OFa18891	NM_168777.2 Latest version!	Drosophila melanogaster HP1-HOAP-interacting protein (HipHop), transcript variant B, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$174.30 $249.00
OFa18891	NM_140804.3 Latest version!	Drosophila melanogaster HP1-HOAP-interacting protein (HipHop), transcript variant A, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$174.30 $249.00

ORF Online Only Promotion

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

HipHop ( NM_140804.3 ) cDNA ORF clone, Drosophila melanogaster(fruit fly) -> NP_649061.1 Drosophila melanogaster HP1-HOAP-interacting protein (HipHop), transcript variant A, mRNA.

Price & Availability↑

CloneID	OFa18891
Clone ID Related Accession (Same CDS sequence)	NM_140804.3 , NM_168777.2
Accession Version	NM_140804.3 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 666bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-04-24
Organism	Drosophila melanogaster(fruit fly)
Product	HP1-HOAP-interacting protein, isoform A
Comment	Comment: REVIEWED REFSEQ: This record has been curated by FlyBase. This record is derived from an annotated genomic sequence (NT_037436). On Jan 16, 2013 this sequence version replaced NM_140804.2. ##Genome-Annotation-Data-START## Annotation Provider :: FlyBase Annotation Status :: Full annotation Annotation Version :: Release 6.26 URL :: http://flybase.org ##Genome-Annotation-Data-END##

ATGGCCTCCA TTGACGAGGG CTCGCGCGTT GAGCGGAGAT TCTGCGCAGT CGGCAACCAC 
ACGCTGCGGA AGCCGTATCG CCAACTGAAC AACAAATATT TGGTGCGCTT CGCCTGTTTG 
CTGAACAGCG AAATTCGGGC GGGCAACCTC ATCTGCTGCA AGTGCTACAC GGACCTGGTG 
CGACTCTACC GGAAGAAGAA CGACAATGCC AAACGGCACA AGATGGCCAG GGAGACTGCC 
GCGAGCATTA CGGACGTCAG CGGCAGTCAG TCATCGTCGC ACCAAAGTGC GCCCTCTTTG 
CATGTCTCTG GCCAAAGTTC CGAATTCGGT GCCTCATACA GTGAGGGGGG CATTGTGACT 
CCCGATGAAG AGCTGTGCTC CCACAGAAGC TTAAGTCAAG ATTCAGACAA TGTGCCCACT 
ACCAGCGCTG CAGCGATCCA AAAACGCCAG CTTGCGAGGG CAAACCTAAT GGTGAAACCA 
TCGCAGAGGC TGAGCTTGGC CCAGACTACT CCGGATTGCG ACGACTACGA CCCCAACTCG 
AATCTCAGTT TGAACGCCGT GAATGGCACG CGACTGCCGC ACATTCAGCC GATTCCAAAG 
AGGCGCCCGA CCGTCCTGGA CAAGCAGTCC ATGGATATTT ACTTGATGGG AACCACAGGT 
GGTTAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_649061.1
CDS	78..743
Translation	MASIDEGSRVERRFCAVGNHTLRKPYRQLNNKYLVRFACLLNSEIRAGNLICCKCYTDLVRLYRKKNDNAKRHKMARETAASITDVSGSQSSSHQSAPSLHVSGQSSEFGASYSEGGIVTPDEELCSHRSLSQDSDNVPTTSAAAIQKRQLARANLMVKPSQRLSLAQTTPDCDDYDPNSNLSLNAVNGTRLPHIQPIPKRRPTVLDKQSMDIYLMGTTGG

Target ORF information:

RefSeq Version	NM_140804.3
Organism	Drosophila melanogaster(fruit fly)
Definition	Drosophila melanogaster HP1-HOAP-interacting protein (HipHop), transcript variant A, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_140804.3

ORF Insert Sequence:

ATGGCCTCCA TTGACGAGGG CTCGCGCGTT GAGCGGAGAT TCTGCGCAGT CGGCAACCAC 
ACGCTGCGGA AGCCGTATCG CCAACTGAAC AACAAATATT TGGTGCGCTT CGCCTGTTTG 
CTGAACAGCG AAATTCGGGC GGGCAACCTC ATCTGCTGCA AGTGCTACAC GGACCTGGTG 
CGACTCTACC GGAAGAAGAA CGACAATGCC AAACGGCACA AGATGGCCAG GGAGACTGCC 
GCGAGCATTA CGGACGTCAG CGGCAGTCAG TCATCGTCGC ACCAAAGTGC GCCCTCTTTG 
CATGTCTCTG GCCAAAGTTC CGAATTCGGT GCCTCATACA GTGAGGGGGG CATTGTGACT 
CCCGATGAAG AGCTGTGCTC CCACAGAAGC TTAAGTCAAG ATTCAGACAA TGTGCCCACT 
ACCAGCGCTG CAGCGATCCA AAAACGCCAG CTTGCGAGGG CAAACCTAAT GGTGAAACCA 
TCGCAGAGGC TGAGCTTGGC CCAGACTACT CCGGATTGCG ACGACTACGA CCCCAACTCG 
AATCTCAGTT TGAACGCCGT GAATGGCACG CGACTGCCGC ACATTCAGCC GATTCCAAAG 
AGGCGCCCGA CCGTCCTGGA CAAGCAGTCC ATGGATATTT ACTTGATGGG AACCACAGGT 
GGTTAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

HipHop ( NM_168777.2 ) cDNA ORF clone, Drosophila melanogaster(fruit fly) -> NP_730362.1 Drosophila melanogaster HP1-HOAP-interacting protein (HipHop), transcript variant B, mRNA.

Price & Availability↑

CloneID	OFa18891
Clone ID Related Accession (Same CDS sequence)	NM_140804.3 , NM_168777.2
Accession Version	NM_168777.2 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 666bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-04-24
Organism	Drosophila melanogaster(fruit fly)
Product	HP1-HOAP-interacting protein, isoform B
Comment	Comment: REVIEWED REFSEQ: This record has been curated by FlyBase. This record is derived from an annotated genomic sequence (NT_037436). On Jan 16, 2013 this sequence version replaced NM_168777.1. ##Genome-Annotation-Data-START## Annotation Provider :: FlyBase Annotation Status :: Full annotation Annotation Version :: Release 6.26 URL :: http://flybase.org ##Genome-Annotation-Data-END##

ATGGCCTCCA TTGACGAGGG CTCGCGCGTT GAGCGGAGAT TCTGCGCAGT CGGCAACCAC 
ACGCTGCGGA AGCCGTATCG CCAACTGAAC AACAAATATT TGGTGCGCTT CGCCTGTTTG 
CTGAACAGCG AAATTCGGGC GGGCAACCTC ATCTGCTGCA AGTGCTACAC GGACCTGGTG 
CGACTCTACC GGAAGAAGAA CGACAATGCC AAACGGCACA AGATGGCCAG GGAGACTGCC 
GCGAGCATTA CGGACGTCAG CGGCAGTCAG TCATCGTCGC ACCAAAGTGC GCCCTCTTTG 
CATGTCTCTG GCCAAAGTTC CGAATTCGGT GCCTCATACA GTGAGGGGGG CATTGTGACT 
CCCGATGAAG AGCTGTGCTC CCACAGAAGC TTAAGTCAAG ATTCAGACAA TGTGCCCACT 
ACCAGCGCTG CAGCGATCCA AAAACGCCAG CTTGCGAGGG CAAACCTAAT GGTGAAACCA 
TCGCAGAGGC TGAGCTTGGC CCAGACTACT CCGGATTGCG ACGACTACGA CCCCAACTCG 
AATCTCAGTT TGAACGCCGT GAATGGCACG CGACTGCCGC ACATTCAGCC GATTCCAAAG 
AGGCGCCCGA CCGTCCTGGA CAAGCAGTCC ATGGATATTT ACTTGATGGG AACCACAGGT 
GGTTAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_730362.1
CDS	137..802
Translation	MASIDEGSRVERRFCAVGNHTLRKPYRQLNNKYLVRFACLLNSEIRAGNLICCKCYTDLVRLYRKKNDNAKRHKMARETAASITDVSGSQSSSHQSAPSLHVSGQSSEFGASYSEGGIVTPDEELCSHRSLSQDSDNVPTTSAAAIQKRQLARANLMVKPSQRLSLAQTTPDCDDYDPNSNLSLNAVNGTRLPHIQPIPKRRPTVLDKQSMDIYLMGTTGG

Target ORF information:

RefSeq Version	NM_168777.2
Organism	Drosophila melanogaster(fruit fly)
Definition	Drosophila melanogaster HP1-HOAP-interacting protein (HipHop), transcript variant B, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_168777.2

ORF Insert Sequence:

ATGGCCTCCA TTGACGAGGG CTCGCGCGTT GAGCGGAGAT TCTGCGCAGT CGGCAACCAC 
ACGCTGCGGA AGCCGTATCG CCAACTGAAC AACAAATATT TGGTGCGCTT CGCCTGTTTG 
CTGAACAGCG AAATTCGGGC GGGCAACCTC ATCTGCTGCA AGTGCTACAC GGACCTGGTG 
CGACTCTACC GGAAGAAGAA CGACAATGCC AAACGGCACA AGATGGCCAG GGAGACTGCC 
GCGAGCATTA CGGACGTCAG CGGCAGTCAG TCATCGTCGC ACCAAAGTGC GCCCTCTTTG 
CATGTCTCTG GCCAAAGTTC CGAATTCGGT GCCTCATACA GTGAGGGGGG CATTGTGACT 
CCCGATGAAG AGCTGTGCTC CCACAGAAGC TTAAGTCAAG ATTCAGACAA TGTGCCCACT 
ACCAGCGCTG CAGCGATCCA AAAACGCCAG CTTGCGAGGG CAAACCTAAT GGTGAAACCA 
TCGCAGAGGC TGAGCTTGGC CCAGACTACT CCGGATTGCG ACGACTACGA CCCCAACTCG 
AATCTCAGTT TGAACGCCGT GAATGGCACG CGACTGCCGC ACATTCAGCC GATTCCAAAG 
AGGCGCCCGA CCGTCCTGGA CAAGCAGTCC ATGGATATTT ACTTGATGGG AACCACAGGT 
GGTTAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data.
G3 (Bethesda, Md.)5(8)1721-36(2015 Jun)
Matthews BB,Dos Santos G,Crosby MA,Emmert DB,St Pierre SE,Gramates LS,Zhou P,Schroeder AJ,Falls K,Strelets V,Russo SM,Gelbart WM,

Gene Model Annotations for Drosophila melanogaster: The Rule-Benders.
G3 (Bethesda, Md.)5(8)1737-49(2015 Jun)
Crosby MA,Gramates LS,Dos Santos G,Matthews BB,St Pierre SE,Zhou P,Schroeder AJ,Falls K,Emmert DB,Russo SM,Gelbart WM,

Sequence finishing and mapping of Drosophila melanogaster heterochromatin.
Science (New York, N.Y.)316(5831)1625-8(2007 Jun)
Hoskins RA,Carlson JW,Kennedy C,Acevedo D,Evans-Holm M,Frise E,Wan KH,Park S,Mendez-Lago M,Rossi F,Villasante A,Dimitri P,Karpen GH,Celniker SE

The Release 5.1 annotation of Drosophila melanogaster heterochromatin.
Science (New York, N.Y.)316(5831)1586-91(2007 Jun)
Smith CD,Shu S,Mungall CJ,Karpen GH

Combined evidence annotation of transposable elements in genome sequences.
PLoS computational biology1(2)166-75(2005 Jul)
Quesneville H,Bergman CM,Andrieu O,Autard D,Nouaud D,Ashburner M,Anxolabehere D

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HipHop cDNA ORF clone, Drosophila melanogaster(fruit fly)

Gene

Clones

gRNAs

Related articles in PubMed

Target ORF information:

Target ORF information:

ORF Insert Sequence:

Target ORF information:

Target ORF information:

ORF Insert Sequence:

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