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AT2G45040 cDNA ORF clone, Arabidopsis thaliana(thale cress)

Summary

Gene Symbol AT2G45040
Entrez Gene ID 819111
Full Name Matrixin family protein
Synonyms T14P1.15
Gene Type protein-coding
Organism Arabidopsis thaliana(thale cress)

Reference Sequences (RefSeq)

mRNA and Protein(s)

mRNA Protein Name
NM_130068.3 NP_182030.1 Matrixin family protein

Pathways from BioSystems


Homologies


Bos taurus (cattle) MMP9 NP_777169.1
Rattus norvegicus (Norway rat) Mmp9 NP_112317.1
Danio rerio (zebrafish) mmp9 NP_998288.1
Xenopus tropicalis (tropical clawed frog) LOC100494738 XP_002932554.1
Pan troglodytes (chimpanzee) MMP9 XP_003317021.1
Mus musculus (house mouse) Mmp9 NP_038627.1
MMP9 XP_001104871.1
Gallus gallus (chicken) MMP9 NP_989998.1
Xenopus tropicalis (tropical clawed frog) mmp9 NP_001006843.1
Homo sapiens (human) MMP9 NP_004985.2
Canis lupus familiaris (dog) MMP9 NP_001003219.1
Arabidopsis thaliana (thale cress) AT2G45040 NP_182030.1

Gene Ontology


Bibliography

Related articles in PubMed

Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana.
Lin X, Kaul S, Rounsley S, Shea TP, Benito MI, Town CD, Fujii CY, Mason T, Bowman CL, Barnstead M, Feldblyum TV, Buell CR, Ketchum KA, Lee J, Ronning CM, Koo HL, Moffat KS, Cronin LA, Shen M, Pai G, Van Aken S, Umayam L, Tallon LJ, Gill JE, Adams MD, Carrera AJ, Creasy TH, Goodman HM, Somerville CR, Copenhaver GP, Preuss D, Nierman WC, White O, Eisen JA, Salzberg SL, Fraser CM, Venter JC
Nature402(6763)761-8(1999 Dec)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following AT2G45040 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the AT2G45040 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OAb09802 NM_130068.3
Latest version!		 Arabidopsis thaliana Matrixin family protein (AT2G45040), mRNA. pcDNA3.1-C-(k)DYK or customized vector 7-9 $258.30
$369.00

ORF Online Only Promotion

Next-day Shipping ORF Clones ( in default vector with tag)
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*Business Day

** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)


CloneID OAb09802
Clone ID Related Accession (Same CDS sequence) NM_130068.3
Accession Version NM_130068.3 Latest version! Documents for ORF clone product in default vector
Sequence Information ORF Nucleotide Sequence (Length: 1029bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ™ Seamless cloning technology
Insert Structure linear
Update Date 2019-02-13
Organism Arabidopsis thaliana(thale cress)
Product Matrixin family protein
Comment Comment: REVIEWED REFSEQ: This record has been curated by TAIR and Araport. This record is derived from an annotated genomic sequence (NC_003071). On Sep 12, 2016 this sequence version replaced NM_130068.2. 

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
ATGCATCATC ATCATCATCC ATGCAATCGC AAACCCTTCA CAACCATCTT CTCCTTCTTC 
CTTCTCTATC TCAATCTCCA TAACCAACAA ATTATCGAAG CTCGAAATCC ATCTCAATTT 
ACGACCAACC CATCCCCTGA CGTCTCTATA CCGGAAATCA AACGTCACCT CCAACAGTAC 
GGTTACCTCC CACAAAACAA AGAATCCGAC GACGTTTCGT TCGAACAAGC TCTCGTTCGT 
TACCAGAAAA ATCTCGGTCT ACCAATAACC GGTAAACCGG ATTCCGACAC GTTGTCACAG 
ATTCTATTAC CAAGATGTGG GTTCCCTGAT GACGTGGAAC CCAAAACGGC ACCGTTTCAC 
ACAGGAAAAA AATACGTGTA CTTCCCCGGA CGGCCCAGGT GGACAAGAGA CGTCCCACTG 
AAACTCACGT ACGCCTTCTC GCAGGAGAAC CTAACTCCTT ACTTAGCACC AACTGACATA 
CGGCGCGTGT TCCGACGCGC TTTCGGCAAG TGGGCTTCGG TGATCCCAGT ATCCTTCATC 
GAAACAGAGG ATTACGTCAT CGCCGACATC AAGATCGGAT TCTTCAACGG AGATCACGGC 
GACGGAGAAC CGTTCGACGG CGTTTTAGGT GTTTTAGCAC ACACTTTCTC TCCGGAAAAC 
GGTAGGCTTC ATCTAGACAA AGCAGAGACG TGGGCCGTAG ATTTCGATGA GGAAAAATCT 
AGTGTGGCCG TCGATTTGGA ATCTGTGGCG GTGCACGAGA TCGGTCACGT GCTTGGATTA 
GGACATAGCT CGGTGAAAGA CGCGGCTATG TATCCAACTT TAAAGCCAAG AAGTAAGAAA 
GTGAATTTGA ATATGGACGA CGTCGTTGGA GTACAGTCTT TGTACGGAAC AAACCCTAAT 
TTCACGTTAA ATAGTTTACT TGCGTCGGAA ACTTCGACAA ATCTAGCCGA TGGTTCGAGG 
ATACGGTCTC AAGGAATGAT CTATTCGACT TTGAGTACTG TTATCGCTCT CTGTTTTCTT 
AATTGGTAG

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq NP_182030.1
CDS194..1222
Translation

Target ORF information:

RefSeq Version NM_130068.3
Organism Arabidopsis thaliana(thale cress)
Definition Arabidopsis thaliana Matrixin family protein (AT2G45040), mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
 NM_130068.3

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
ATGCATCATC ATCATCATCC ATGCAATCGC AAACCCTTCA CAACCATCTT CTCCTTCTTC 
CTTCTCTATC TCAATCTCCA TAACCAACAA ATTATCGAAG CTCGAAATCC ATCTCAATTT 
ACGACCAACC CATCCCCTGA CGTCTCTATA CCGGAAATCA AACGTCACCT CCAACAGTAC 
GGTTACCTCC CACAAAACAA AGAATCCGAC GACGTTTCGT TCGAACAAGC TCTCGTTCGT 
TACCAGAAAA ATCTCGGTCT ACCAATAACC GGTAAACCGG ATTCCGACAC GTTGTCACAG 
ATTCTATTAC CAAGATGTGG GTTCCCTGAT GACGTGGAAC CCAAAACGGC ACCGTTTCAC 
ACAGGAAAAA AATACGTGTA CTTCCCCGGA CGGCCCAGGT GGACAAGAGA CGTCCCACTG 
AAACTCACGT ACGCCTTCTC GCAGGAGAAC CTAACTCCTT ACTTAGCACC AACTGACATA 
CGGCGCGTGT TCCGACGCGC TTTCGGCAAG TGGGCTTCGG TGATCCCAGT ATCCTTCATC 
GAAACAGAGG ATTACGTCAT CGCCGACATC AAGATCGGAT TCTTCAACGG AGATCACGGC 
GACGGAGAAC CGTTCGACGG CGTTTTAGGT GTTTTAGCAC ACACTTTCTC TCCGGAAAAC 
GGTAGGCTTC ATCTAGACAA AGCAGAGACG TGGGCCGTAG ATTTCGATGA GGAAAAATCT 
AGTGTGGCCG TCGATTTGGA ATCTGTGGCG GTGCACGAGA TCGGTCACGT GCTTGGATTA 
GGACATAGCT CGGTGAAAGA CGCGGCTATG TATCCAACTT TAAAGCCAAG AAGTAAGAAA 
GTGAATTTGA ATATGGACGA CGTCGTTGGA GTACAGTCTT TGTACGGAAC AAACCCTAAT 
TTCACGTTAA ATAGTTTACT TGCGTCGGAA ACTTCGACAA ATCTAGCCGA TGGTTCGAGG 
ATACGGTCTC AAGGAATGAT CTATTCGACT TTGAGTACTG TTATCGCTCT CTGTTTTCTT 
AATTGGTAG

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

PubMed

book

Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana.
Nature402(6763)761-8(1999 Dec)
Lin X,Kaul S,Rounsley S,Shea TP,Benito MI,Town CD,Fujii CY,Mason T,Bowman CL,Barnstead M,Feldblyum TV,Buell CR,Ketchum KA,Lee J,Ronning CM,Koo HL,Moffat KS,Cronin LA,Shen M,Pai G,Van Aken S,Umayam L,Tallon LJ,Gill JE,Adams MD,Carrera AJ,Creasy TH,Goodman HM,Somerville CR,Copenhaver GP,Preuss D,Nierman WC,White O,Eisen JA,Salzberg SL,Fraser CM,Venter JC