Gene Symbol |
CABP2 |
Entrez Gene ID |
281654 |
Full Name |
calcium binding protein 2 |
General protein information |
- Preferred Names
calcium binding protein 2
Names
calcium-binding protein 2
|
Gene Type |
protein-coding |
Organism |
Bos taurus(cattle) |
mRNA and Protein(s)
mRNA |
Protein |
Name |
NM_174255.2 |
NP_776680.1 |
calcium-binding protein 2 |
XM_024986971.1 |
XP_024842739.1 |
calcium-binding protein 2 isoform X1 |
XM_005226978.3 |
XP_005227035.1 |
calcium-binding protein 2 isoform X1 |
NM_174255.3 |
NP_776680.2 |
calcium-binding protein 2 |
Pan troglodytes (chimpanzee) |
CABP2 |
XP_522082.3 |
Mus musculus (house mouse) |
Cabp2 |
NP_038906.2 |
Gallus gallus (chicken) |
CABP2 |
NP_001264540.1 |
Canis lupus familiaris (dog) |
CABP2 |
XP_854627.3 |
Rattus norvegicus (Norway rat) |
Cabp2 |
XP_574595.3 |
Danio rerio (zebrafish) |
cabp2b |
XP_005169679.1 |
Xenopus tropicalis (tropical clawed frog) |
LOC100487419 |
XP_002940318.2 |
|
CABP2 |
XP_001117908.2 |
Bos taurus (cattle) |
CABP2 |
NP_776680.1 |
Danio rerio (zebrafish) |
cabp2a |
NP_001025439.2 |
Homo sapiens (human) |
CABP2 |
NP_057450.2 |
Related articles in PubMed
A whole-genome assembly of the domestic cow, Bos taurus.
Zimin AV, Delcher AL, Florea L, Kelley DR, Schatz MC, Puiu D, Hanrahan F, Pertea G, Van Tassell CP, Sonstegard TS, Mar?ais G, Roberts M, Subramanian P, Yorke JA, Salzberg SL
Genome biology10(4)R42(2009)
Five members of a novel Ca(2+)-binding protein (CABP) subfamily with similarity to calmodulin.
Haeseleer F, Sokal I, Verlinde CL, Erdjument-Bromage H, Tempst P, Pronin AN, Benovic JL, Fariss RN, Palczewski K
The Journal of biological chemistry275(2)1247-60(2000 Jan)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following CABP2 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the CABP2 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID |
OBa239182 |
Clone ID Related Accession (Same CDS sequence) |
NM_174255.3
|
Accession Version |
NM_174255.3 Latest version! |
Documents for ORF clone product in default vector |
Sequence Information |
ORF Nucleotide Sequence (Length: 507bp)
Protein sequence
SNP |
Vector |
pcDNA3.1+/C-(K)DYK or customized vector |
User Manual |
Clone information |
Clone Map |
MSDS |
Tag on pcDNA3.1+/C-(K)DYK |
C terminal DYKDDDDK tags |
ORF Insert Method |
CloneEZ™ Seamless cloning technology |
Insert Structure |
linear |
Update Date |
2019-10-22 |
Organism |
Bos taurus(cattle) |
Product |
calcium-binding protein 2 |
Comment |
Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from NKLS02000029.1. On Jan 19, 2018 this sequence version replaced NM_174255.2.
Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments.
##Evidence-Data-START##
Transcript exon combination :: AF169155.1 [ECO:0000332]
RNAseq introns :: mixed/partial sample support SAMN03145413, SAMN03145419 [ECO:0000350]
##Evidence-Data-END##
|
1 61 121 181 241 301 361 421 481
| ATGGTTCAAG GGCCCATGGG AAACTGTGCC AAGCGGCCCC GGCACCGGGC GCCTAAGGAC CGGGAGCTGC GGCCAGAGGA GATTGAAGAG CTGCAGGCCG CCTTCCAGGA GTTTGACAGA GACCGGGACG GCTACATCGG CTACCAGGAG CTTGGGGCCT GCATGCGGAC GCTGGGCTAC ATGCCCACCG AGATGGAGCT CATCGAGATC TCCCAGCAAA TCAGTGGCGG GAAGGTGGAC TTTGAAGACT TTGTGGAGCT GATGGGCCCC AAGCTGCTAG CGGAGACCGC GGACATGATC GGCGTCCGGG AGCTGCGGGA CGCCTTCCGG GAGTTCGACA CCAACGGGGA CGGCTGCATC AGCCTGGGTG AGCTCCGGGC GGCCCTGAAG GCCCTGCTGG GAGAGCGGCT CAGCCAGCGG GAGGTGGACG AGATCCTCCG CGACATTGAC CTCAACGGGG ACGGCCTGGT GGACTTCGAA GAGTTTGTGC GAATGATGTC TCGCTGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq |
NP_776680.2 |
CDS | 67..573 |
Translation | |
Target ORF information:
RefSeq Version | NM_174255.3 |
Organism | Bos taurus(cattle) |
Definition | Bos taurus calcium binding protein 2 (CABP2), mRNA. |
Target ORF information:
Epitope | DYKDDDDK |
Bacterial selection | AMPR |
Mammalian selection | NeoR |
Vector | pcDNA3.1+/C-(K)DYK |
|
NM_174255.3 |
ORF Insert Sequence:
1 61 121 181 241 301 361 421 481
| ATGGTTCAAG GGCCCATGGG AAACTGTGCC AAGCGGCCCC GGCACCGGGC GCCTAAGGAC CGGGAGCTGC GGCCAGAGGA GATTGAAGAG CTGCAGGCCG CCTTCCAGGA GTTTGACAGA GACCGGGACG GCTACATCGG CTACCAGGAG CTTGGGGCCT GCATGCGGAC GCTGGGCTAC ATGCCCACCG AGATGGAGCT CATCGAGATC TCCCAGCAAA TCAGTGGCGG GAAGGTGGAC TTTGAAGACT TTGTGGAGCT GATGGGCCCC AAGCTGCTAG CGGAGACCGC GGACATGATC GGCGTCCGGG AGCTGCGGGA CGCCTTCCGG GAGTTCGACA CCAACGGGGA CGGCTGCATC AGCCTGGGTG AGCTCCGGGC GGCCCTGAAG GCCCTGCTGG GAGAGCGGCT CAGCCAGCGG GAGGTGGACG AGATCCTCCG CGACATTGAC CTCAACGGGG ACGGCCTGGT GGACTTCGAA GAGTTTGTGC GAATGATGTC TCGCTGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID |
OBa43470 |
Clone ID Related Accession (Same CDS sequence) |
NM_174255.2
|
Accession Version |
NM_174255.2 Latest version! |
Documents for ORF clone product in default vector |
Sequence Information |
ORF Nucleotide Sequence (Length: 492bp)
Protein sequence
SNP |
Vector |
pcDNA3.1+/C-(K)DYK or customized vector |
User Manual |
Clone information |
Clone Map |
MSDS |
Tag on pcDNA3.1+/C-(K)DYK |
C terminal DYKDDDDK tags |
ORF Insert Method |
CloneEZ™ Seamless cloning technology |
Insert Structure |
linear |
Update Date |
2017-10-21 |
Organism |
Bos taurus(cattle) |
Product |
calcium-binding protein 2 |
Comment |
Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from AF169155.1. On Jun 3, 2003 this sequence version replaced NM_174255.1.
##Evidence-Data-START##
Transcript exon combination :: AF169155.1 [ECO:0000332]
RNAseq introns :: single sample supports all introns SAMN02947218, SAMN02947219 [ECO:0000348]
##Evidence-Data-END##
|
1 61 121 181 241 301 361 421 481
| ATGGGAAACT GTGCCAAGCG GCCCCGGCAC CGGGCGCCTA AGGACCGGGA GCTGCGGCCA GAGGAGATTG AAGAGCTGCA GGCCGCCTTC CAGGAGTTTG ACAGAGACCG GGACGGCTAC ATCGGCTACC AGGAGCTTGG GGCCTGCATG CGGACGCTGG GCTACATGCC CACCGAGATG GAGCTCATCG AGATCTCCCA GCAAATCAGT GGCGGGAAGG TGGACTTTGA AGACTTTGTG GAGCTGATGG GCCCCAAGCT GCTAGCGGAG ACCGCGGACA TGATCGGCGT CCGGGAGCTG CGGGACGCCT TCCGGGAGTT CGACACCAAC GGGGACGGCT GCATCAGCCT GGGTGAGCTC CGGGCGGCCC TGAAGGCCCT GCTGGGAGAG CGGCTCAGCC AGCGGGAGGT GGACGAGATC CTCCGCGACA TTGACCTCAA CGGGGACGGC CTGGTGGACT TCGAAGAGTT TGTGCGAATG ATGTCTCGCT GA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq |
NP_776680.1 |
CDS | 82..573 |
Translation | |
Target ORF information:
RefSeq Version | NM_174255.2 |
Organism | Bos taurus(cattle) |
Definition | Bos taurus calcium binding protein 2 (CABP2), mRNA. |
Target ORF information:
Epitope | DYKDDDDK |
Bacterial selection | AMPR |
Mammalian selection | NeoR |
Vector | pcDNA3.1+/C-(K)DYK |
|
NM_174255.2 |
ORF Insert Sequence:
1 61 121 181 241 301 361 421 481
| ATGGGAAACT GTGCCAAGCG GCCCCGGCAC CGGGCGCCTA AGGACCGGGA GCTGCGGCCA GAGGAGATTG AAGAGCTGCA GGCCGCCTTC CAGGAGTTTG ACAGAGACCG GGACGGCTAC ATCGGCTACC AGGAGCTTGG GGCCTGCATG CGGACGCTGG GCTACATGCC CACCGAGATG GAGCTCATCG AGATCTCCCA GCAAATCAGT GGCGGGAAGG TGGACTTTGA AGACTTTGTG GAGCTGATGG GCCCCAAGCT GCTAGCGGAG ACCGCGGACA TGATCGGCGT CCGGGAGCTG CGGGACGCCT TCCGGGAGTT CGACACCAAC GGGGACGGCT GCATCAGCCT GGGTGAGCTC CGGGCGGCCC TGAAGGCCCT GCTGGGAGAG CGGCTCAGCC AGCGGGAGGT GGACGAGATC CTCCGCGACA TTGACCTCAA CGGGGACGGC CTGGTGGACT TCGAAGAGTT TGTGCGAATG ATGTCTCGCT GA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID |
OBa231830 |
Clone ID Related Accession (Same CDS sequence) |
XM_024986971.1
|
Accession Version |
XM_024986971.1 Latest version! |
Documents for ORF clone product in default vector |
Sequence Information |
ORF Nucleotide Sequence (Length: 732bp)
Protein sequence
SNP |
Vector |
pcDNA3.1+/C-(K)DYK or customized vector |
User Manual |
Clone information |
Clone Map |
MSDS |
Tag on pcDNA3.1+/C-(K)DYK |
C terminal DYKDDDDK tags |
ORF Insert Method |
CloneEZ™ Seamless cloning technology |
Insert Structure |
linear |
Update Date |
2018-05-06 |
Organism |
Bos taurus(cattle) |
Product |
calcium-binding protein 2 isoform X1 |
Comment |
Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037356.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Status :: Full annotation
Annotation Name :: Bos taurus Annotation Release 106
Annotation Version :: 106
Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline
Annotation Software Version :: 8.0
Annotation Method :: Best-placed RefSeq; Gnomon
Features Annotated :: Gene; mRNA; CDS; ncRNA
##Genome-Annotation-Data-END##
|
1 61 121 181 241 301 361 421 481 541 601 661 721
| ATGGTGAGGT TCCACTGTCC TGTGCTGGGT TCTAACAACG GGAGAGGCTG GCAAGTGAGG GTGGAGAGGG GTCACTGCCC CAGCTCATGG CTGGCTCTGC TGCAGGACCG CTGGCAGTGG CCTGGCTCCC CCCCAGGGGG GTCCCGCCAT GGCCTGGGCC CCAGCCCCAG TCCCGAGGAG CCGGGGGCCC CTGGGCCGGG CGTCCAGGGC TACTCCGTGC TCAGCAGCGT GGTGGGGCCC GCCTGCATCT TTCTGCGGCC CAGCATCGCC GCCACCCAGC TCGACCGGGA GCTGCGGCCA GAGGAGATTG AAGAGCTGCA GGCCGCCTTC CAGGAGTTTG ACAGAGACCG GGACGGCTAC ATCGGCTACC AGGAGCTTGG GGCCTGCATG CGGACGCTGG GCTACATGCC CACCGAGATG GAGCTCATCG AGATCTCCCA GCAAATCAGT GGCGGGAAGG TGGACTTTGA AGACTTTGTG GAGCTGATGG GCCCCAAGCT GCTAGCGGAG ACCGCGGACA TGATCGGCGT CCGGGAGCTG CGGGACGCCT TCCGGGAGTT CGACACCAAC GGGGACGGCT GCATCAGCCT GGGTGAGCTC CGGGCGGCCC TGAAGGCCCT GCTGGGAGAG CGGCTCAGCC AGCGGGAGGT GGACGAGATC CTCCGCGACA TTGACCTCAA CGGGGACGGC CTGGTGGACT TCGAAGAGTT TGTGCGAATG ATGTCTCGCT GA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq |
XP_024842739.1 |
CDS | 218..949 |
Translation | |
Target ORF information:
RefSeq Version | XM_024986971.1 |
Organism | Bos taurus(cattle) |
Definition | Bos taurus calcium binding protein 2 (CABP2), transcript variant X1, mRNA. |
Target ORF information:
Epitope | DYKDDDDK |
Bacterial selection | AMPR |
Mammalian selection | NeoR |
Vector | pcDNA3.1+/C-(K)DYK |
|
XM_024986971.1 |
ORF Insert Sequence:
1 61 121 181 241 301 361 421 481 541 601 661 721
| ATGGTGAGGT TCCACTGTCC TGTGCTGGGT TCTAACAACG GGAGAGGCTG GCAAGTGAGG GTGGAGAGGG GTCACTGCCC CAGCTCATGG CTGGCTCTGC TGCAGGACCG CTGGCAGTGG CCTGGCTCCC CCCCAGGGGG GTCCCGCCAT GGCCTGGGCC CCAGCCCCAG TCCCGAGGAG CCGGGGGCCC CTGGGCCGGG CGTCCAGGGC TACTCCGTGC TCAGCAGCGT GGTGGGGCCC GCCTGCATCT TTCTGCGGCC CAGCATCGCC GCCACCCAGC TCGACCGGGA GCTGCGGCCA GAGGAGATTG AAGAGCTGCA GGCCGCCTTC CAGGAGTTTG ACAGAGACCG GGACGGCTAC ATCGGCTACC AGGAGCTTGG GGCCTGCATG CGGACGCTGG GCTACATGCC CACCGAGATG GAGCTCATCG AGATCTCCCA GCAAATCAGT GGCGGGAAGG TGGACTTTGA AGACTTTGTG GAGCTGATGG GCCCCAAGCT GCTAGCGGAG ACCGCGGACA TGATCGGCGT CCGGGAGCTG CGGGACGCCT TCCGGGAGTT CGACACCAAC GGGGACGGCT GCATCAGCCT GGGTGAGCTC CGGGCGGCCC TGAAGGCCCT GCTGGGAGAG CGGCTCAGCC AGCGGGAGGT GGACGAGATC CTCCGCGACA TTGACCTCAA CGGGGACGGC CTGGTGGACT TCGAAGAGTT TGTGCGAATG ATGTCTCGCT GA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID |
OBa34714 |
Clone ID Related Accession (Same CDS sequence) |
XM_005226978.3
|
Accession Version |
XM_005226978.3 Latest version! |
Documents for ORF clone product in default vector |
Sequence Information |
ORF Nucleotide Sequence (Length: 684bp)
Protein sequence
SNP |
Vector |
pcDNA3.1+/C-(K)DYK or customized vector |
User Manual |
Clone information |
Clone Map |
MSDS |
Tag on pcDNA3.1+/C-(K)DYK |
C terminal DYKDDDDK tags |
ORF Insert Method |
CloneEZ™ Seamless cloning technology |
Insert Structure |
linear |
Update Date |
2016-01-25 |
Organism |
Bos taurus(cattle) |
Product |
calcium-binding protein 2 isoform X1 |
Comment |
Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_003104647.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process
On Jan 26, 2016 this sequence version replaced XM_005226978.2.
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Status :: Full annotation
Annotation Version :: Bos taurus Annotation Release 105
Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline
Annotation Software Version :: 6.5
Annotation Method :: Best-placed RefSeq; Gnomon
Features Annotated :: Gene; mRNA; CDS; ncRNA
##Genome-Annotation-Data-END##
|
1 61 121 181 241 301 361 421 481 541 601 661
| ATGGTTCAAG GGCCCATGGG AAACTGTGCC AAGCGGCCCC GGCACCGGGC GCCTAAGGAC CGCTGGCAGT GGCCTGGCTC CCCCCCAGGG GGGTCCCGCC ATGGCCTGGG CCCCAGCCCC AGTCCCGAGG AGCCGGGGGC CCCTGGGCCG GGCGTCCAGG GCTACTCCGT GCTCAGCAGC GTGGTGGGGC CCGCCTGCAT CTTTCTGCGG CCCAGCATCG CCGCCACCCA GCTCGACCGG GAGCTGCGGC CAGAGGAGAT TGAAGAGCTG CAGGCCGCCT TCCAGGAGTT TGACAGAGAC CGGGACGGCT ACATCGGCTA CCAGGAGCTT GGGGCCTGCA TGCGGACGCT GGGCTACATG CCCACCGAGA TGGAGCTCAT CGAGATCTCC CAGCAAATCA GTGGCGGGAA GGTGGACTTT GAAGACTTTG TGGAGCTGAT GGGCCCCAAG CTGCTAGCGG AGACCGCGGA CATGATCGGC GTCCGGGAGC TGCGGGACGC CTTCCGGGAG TTCGACACCA ACGGGGACGG CTGCATCAGC CTGGGTGAGC TCCGGGCGGC CCTGAAGGCC CTGCTGGGAG AGCGGCTCAG CCAGCGGGAG GTGGACGAGA TCCTCCGCGA CATTGACCTC AACGGGGACG GCCTGGTGGA CTTCGAAGAG TTTGTGCGAA TGATGTCTCG CTGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq |
XP_005227035.1 |
CDS | 46..729 |
Translation | |
Target ORF information:
RefSeq Version | XM_005226978.3 |
Organism | Bos taurus(cattle) |
Definition | Bos taurus calcium binding protein 2 (CABP2), transcript variant X1, mRNA. |
Target ORF information:
Epitope | DYKDDDDK |
Bacterial selection | AMPR |
Mammalian selection | NeoR |
Vector | pcDNA3.1+/C-(K)DYK |
|
XM_005226978.3 |
ORF Insert Sequence:
1 61 121 181 241 301 361 421 481 541 601 661
| ATGGTTCAAG GGCCCATGGG AAACTGTGCC AAGCGGCCCC GGCACCGGGC GCCTAAGGAC CGCTGGCAGT GGCCTGGCTC CCCCCCAGGG GGGTCCCGCC ATGGCCTGGG CCCCAGCCCC AGTCCCGAGG AGCCGGGGGC CCCTGGGCCG GGCGTCCAGG GCTACTCCGT GCTCAGCAGC GTGGTGGGGC CCGCCTGCAT CTTTCTGCGG CCCAGCATCG CCGCCACCCA GCTCGACCGG GAGCTGCGGC CAGAGGAGAT TGAAGAGCTG CAGGCCGCCT TCCAGGAGTT TGACAGAGAC CGGGACGGCT ACATCGGCTA CCAGGAGCTT GGGGCCTGCA TGCGGACGCT GGGCTACATG CCCACCGAGA TGGAGCTCAT CGAGATCTCC CAGCAAATCA GTGGCGGGAA GGTGGACTTT GAAGACTTTG TGGAGCTGAT GGGCCCCAAG CTGCTAGCGG AGACCGCGGA CATGATCGGC GTCCGGGAGC TGCGGGACGC CTTCCGGGAG TTCGACACCA ACGGGGACGG CTGCATCAGC CTGGGTGAGC TCCGGGCGGC CCTGAAGGCC CTGCTGGGAG AGCGGCTCAG CCAGCGGGAG GTGGACGAGA TCCTCCGCGA CATTGACCTC AACGGGGACG GCCTGGTGGA CTTCGAAGAG TTTGTGCGAA TGATGTCTCG CTGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
 |
A whole-genome assembly of the domestic cow, Bos taurus.
Genome biology10(4)R42(2009)
Zimin AV,Delcher AL,Florea L,Kelley DR,Schatz MC,Puiu D,Hanrahan F,Pertea G,Van Tassell CP,Sonstegard TS,Mar?ais G,Roberts M,Subramanian P,Yorke JA,Salzberg SL |