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ATP6V1D cDNA ORF clone, Bos taurus(cattle)

Summary

Gene Symbol ATP6V1D
Entrez Gene ID 404152
Full Name ATPase H+ transporting V1 subunit D
Synonyms VATD
General protein information
Preferred Names

ATPase H+ transporting V1 subunit D

Names

V-type proton ATPase subunit D
V-ATPase 28 kDa accessory protein
V-ATPase subunit D
vacuolar H-ATPase subunit D
vacuolar proton pump subunit D
Gene Type protein-coding
Organism Bos taurus(cattle)

Reference Sequences (RefSeq)

mRNA and Protein(s)

mRNA Protein Name
NM_001075141.2 NP_001068609.2 V-type proton ATPase subunit D isoform 1
NM_001257088.1 NP_001244017.1 V-type proton ATPase subunit D isoform 2

Pathways from BioSystems


Homologies


Bos taurus (cattle) ATP6V1D NP_001068609.2
Gallus gallus (chicken) ATP6V1D NP_001264368.1
Kluyveromyces lactis KLLA0A01991g XP_451088.1
Homo sapiens (human) ATP6V1D NP_057078.1
Mus musculus (house mouse) Atp6v1d NP_076210.1
Drosophila melanogaster (fruit fly) Vha36-1 NP_651987.1
Schizosaccharomyces pombe (fission yeast) vma8 NP_588513.1
Neurospora crassa NCU08035 XP_962705.2
Arabidopsis thaliana (thale cress) AT3G58730 NP_191432.1
Oryza sativa (rice) Os04g0643100 NP_001054048.1
Pan troglodytes (chimpanzee) ATP6V1D XP_001136552.1
Saccharomyces cerevisiae (baker's yeast) VMA8 NP_010863.1
Rattus norvegicus (Norway rat) Atp6v1d NP_955418.1
Danio rerio (zebrafish) atp6v1d NP_001161426.1
Caenorhabditis elegans (roundworm) vha-14 NP_499094.1
Eremothecium gossypii AGOS_AAR130C NP_982672.1
ATP6V1D XP_001106329.1
Canis lupus familiaris (dog) ATP6V1D XP_537484.2
Anopheles gambiae (African malaria mosquito) AgaP_AGAP010298 XP_318202.3
Magnaporthe oryzae (rice blast fungus) MGG_07086 XP_003715275.1
Xenopus tropicalis (tropical clawed frog) atp6v1d NP_001017075.1

Gene Ontology


Bibliography

Related articles in PubMed

A whole-genome assembly of the domestic cow, Bos taurus.
Zimin AV, Delcher AL, Florea L, Kelley DR, Schatz MC, Puiu D, Hanrahan F, Pertea G, Van Tassell CP, Sonstegard TS, Mar?ais G, Roberts M, Subramanian P, Yorke JA, Salzberg SL
Genome biology10(4)R42(2009)

Characterization of gene expression profiles in early bovine pregnancy using a custom cDNA microarray.
Ishiwata H, Katsuma S, Kizaki K, Patel OV, Nakano H, Takahashi T, Imai K, Hirasawa A, Shiojima S, Ikawa H, Suzuki Y, Tsujimoto G, Izaike Y, Todoroki J, Hashizume K
Molecular reproduction and development65(1)9-18(2003 May)

A bovine cDNA and a yeast gene (VMA8) encoding the subunit D of the vacuolar H(+)-ATPase.
Nelson H, Mandiyan S, Nelson N
Proceedings of the National Academy of Sciences of the United States of America92(2)497-501(1995 Jan)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following ATP6V1D gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the ATP6V1D cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OBa44820 NM_001257088.1
Latest version!		 Bos taurus ATPase H+ transporting V1 subunit D (ATP6V1D), transcript variant 2, mRNA. pcDNA3.1+/C-(K)DYK or customized vector 7-9 $104.30
$149.00
OBa44861 NM_001075141.2
Latest version!		 Bos taurus ATPase H+ transporting V1 subunit D (ATP6V1D), transcript variant 1, mRNA. pcDNA3.1+/C-(K)DYK or customized vector 7-9 $174.30
$249.00

ORF Online Only Promotion

Next-day Shipping ORF Clones ( in default vector with tag)
1 Clone 30% OFF
2-4 Clone 40% OFF
5 or more Clone 50% OFF
All Other ORF Clones
30% OFF

*Business Day

** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)


CloneID OBa44820
Clone ID Related Accession (Same CDS sequence) NM_001257088.1
Accession Version NM_001257088.1 Latest version! Documents for ORF clone product in default vector
Sequence Information ORF Nucleotide Sequence (Length: 579bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ™ Seamless cloning technology
Insert Structure linear
Update Date 2019-06-07
Organism Bos taurus(cattle)
Product V-type proton ATPase subunit D isoform 2
Comment Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from EH151848.1, FE012554.1 and EV734895.1. Transcript Variant: This variant (2) lacks an exon in the 5' coding region and uses a downstream in-frame start codon, compared to variant 1. The encoded isoform (2) is shorter at the N-terminus, compared to isoform 1. ##Evidence-Data-START## Transcript exon combination :: FE012554.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN05861800 [ECO:0000348] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. 

1
61
121
181
241
301
361
421
481
541
ATGTTGATGG GTGAAGTGAT GAGAGAAGCT GCCTTTTCAC TTGCTGAGGC CAAGTTCACA 
GCAGGGGACT TCAGCACCAC AGTTATCCAA AATGTAAATA AGGCCCAAGT GAAGATTAGA 
GCAAAGAAAG ATAATGTAGC AGGTGTTACA TTGCCAGTAT TTGAACATTA TCATGAAGGA 
ACTGACAGTT ATGAACTGAC TGGTTTAGCC AGAGGTGGGG AACAGTTGGC TAAACTGAAG 
AGGAATTATG CCAAAGCAGT GGAACTACTG GTGGAACTGG CTTCACTGCA GACGTCCTTT 
GTTACTTTGG ATGAAGCTAT TAAGATAACC AACAGGCGTG TAAACGCTAT TGAACATGTC 
ATCATTCCCC GGATTGAACG TACCCTTGCT TATATCATCA CAGAGCTGGA TGAAAGAGAG 
CGAGAGGAGT TCTACAGATT AAAGAAAATA CAGGAGAAGA AAAAGATTCT CAAGGAGAAG 
TCTGATAAGG ACTTGGAGCA ACGGAGGGCA GCCGGAGAGG TGATAGAGCC TGCTAATCTC 
CTGGCTGAAG AGAAGGATGA AGATCTTCTG TTTGAATAA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq NP_001244017.1
CDS185..763
Translation

Target ORF information:

RefSeq Version NM_001257088.1
Organism Bos taurus(cattle)
Definition Bos taurus ATPase H+ transporting V1 subunit D (ATP6V1D), transcript variant 2, mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
 NM_001257088.1

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
ATGTTGATGG GTGAAGTGAT GAGAGAAGCT GCCTTTTCAC TTGCTGAGGC CAAGTTCACA 
GCAGGGGACT TCAGCACCAC AGTTATCCAA AATGTAAATA AGGCCCAAGT GAAGATTAGA 
GCAAAGAAAG ATAATGTAGC AGGTGTTACA TTGCCAGTAT TTGAACATTA TCATGAAGGA 
ACTGACAGTT ATGAACTGAC TGGTTTAGCC AGAGGTGGGG AACAGTTGGC TAAACTGAAG 
AGGAATTATG CCAAAGCAGT GGAACTACTG GTGGAACTGG CTTCACTGCA GACGTCCTTT 
GTTACTTTGG ATGAAGCTAT TAAGATAACC AACAGGCGTG TAAACGCTAT TGAACATGTC 
ATCATTCCCC GGATTGAACG TACCCTTGCT TATATCATCA CAGAGCTGGA TGAAAGAGAG 
CGAGAGGAGT TCTACAGATT AAAGAAAATA CAGGAGAAGA AAAAGATTCT CAAGGAGAAG 
TCTGATAAGG ACTTGGAGCA ACGGAGGGCA GCCGGAGAGG TGATAGAGCC TGCTAATCTC 
CTGGCTGAAG AGAAGGATGA AGATCTTCTG TTTGAATAA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

CloneID OBa44861
Clone ID Related Accession (Same CDS sequence) NM_001075141.2
Accession Version NM_001075141.2 Latest version! Documents for ORF clone product in default vector
Sequence Information ORF Nucleotide Sequence (Length: 744bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ™ Seamless cloning technology
Insert Structure linear
Update Date 2019-06-07
Organism Bos taurus(cattle)
Product V-type proton ATPase subunit D isoform 1
Comment Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from EH151848.1 and EV734895.1. On Mar 10, 2012 this sequence version replaced NM_001075141.1. Transcript Variant: This variant (1) represents the longer transcript and encodes the longer isoform (1). ##Evidence-Data-START## Transcript exon combination :: EH151848.1, DV778082.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN05861800 [ECO:0000348] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. 

1
61
121
181
241
301
361
421
481
541
601
661
721
ATGTCGGGCA AAGACCGAAT TGAAATCTTT CCCTCGCGAA TGGCACAGAC CATCATGAAG 
GCTCGGTTAA AAGGAGCACA GACAGGTCGA AACCTCCTGA AGAAAAAATC TGATGCCTTA 
ACTCTTCGAT TTCGACAGAT CCTTAAGAAG ATAATAGAGA CTAAAATGTT GATGGGTGAA 
GTGATGAGAG AAGCTGCCTT TTCACTTGCT GAGGCCAAGT TCACAGCAGG GGACTTCAGC 
ACCACAGTTA TCCAAAATGT AAATAAGGCC CAAGTGAAGA TTAGAGCAAA GAAAGATAAT 
GTAGCAGGTG TTACATTGCC AGTATTTGAA CATTATCATG AAGGAACTGA CAGTTATGAA 
CTGACTGGTT TAGCCAGAGG TGGGGAACAG TTGGCTAAAC TGAAGAGGAA TTATGCCAAA 
GCAGTGGAAC TACTGGTGGA ACTGGCTTCA CTGCAGACGT CCTTTGTTAC TTTGGATGAA 
GCTATTAAGA TAACCAACAG GCGTGTAAAC GCTATTGAAC ATGTCATCAT TCCCCGGATT 
GAACGTACCC TTGCTTATAT CATCACAGAG CTGGATGAAA GAGAGCGAGA GGAGTTCTAC 
AGATTAAAGA AAATACAGGA GAAGAAAAAG ATTCTCAAGG AGAAGTCTGA TAAGGACTTG 
GAGCAACGGA GGGCAGCCGG AGAGGTGATA GAGCCTGCTA ATCTCCTGGC TGAAGAGAAG 
GATGAAGATC TTCTGTTTGA ATAA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq NP_001068609.2
CDS138..881
Translation

Target ORF information:

RefSeq Version NM_001075141.2
Organism Bos taurus(cattle)
Definition Bos taurus ATPase H+ transporting V1 subunit D (ATP6V1D), transcript variant 1, mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
 NM_001075141.2

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
601
661
721
ATGTCGGGCA AAGACCGAAT TGAAATCTTT CCCTCGCGAA TGGCACAGAC CATCATGAAG 
GCTCGGTTAA AAGGAGCACA GACAGGTCGA AACCTCCTGA AGAAAAAATC TGATGCCTTA 
ACTCTTCGAT TTCGACAGAT CCTTAAGAAG ATAATAGAGA CTAAAATGTT GATGGGTGAA 
GTGATGAGAG AAGCTGCCTT TTCACTTGCT GAGGCCAAGT TCACAGCAGG GGACTTCAGC 
ACCACAGTTA TCCAAAATGT AAATAAGGCC CAAGTGAAGA TTAGAGCAAA GAAAGATAAT 
GTAGCAGGTG TTACATTGCC AGTATTTGAA CATTATCATG AAGGAACTGA CAGTTATGAA 
CTGACTGGTT TAGCCAGAGG TGGGGAACAG TTGGCTAAAC TGAAGAGGAA TTATGCCAAA 
GCAGTGGAAC TACTGGTGGA ACTGGCTTCA CTGCAGACGT CCTTTGTTAC TTTGGATGAA 
GCTATTAAGA TAACCAACAG GCGTGTAAAC GCTATTGAAC ATGTCATCAT TCCCCGGATT 
GAACGTACCC TTGCTTATAT CATCACAGAG CTGGATGAAA GAGAGCGAGA GGAGTTCTAC 
AGATTAAAGA AAATACAGGA GAAGAAAAAG ATTCTCAAGG AGAAGTCTGA TAAGGACTTG 
GAGCAACGGA GGGCAGCCGG AGAGGTGATA GAGCCTGCTA ATCTCCTGGC TGAAGAGAAG 
GATGAAGATC TTCTGTTTGA ATAA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

PubMed

book

A whole-genome assembly of the domestic cow, Bos taurus.
Genome biology10(4)R42(2009)
Zimin AV,Delcher AL,Florea L,Kelley DR,Schatz MC,Puiu D,Hanrahan F,Pertea G,Van Tassell CP,Sonstegard TS,Mar?ais G,Roberts M,Subramanian P,Yorke JA,Salzberg SL


book

Characterization of gene expression profiles in early bovine pregnancy using a custom cDNA microarray.
Molecular reproduction and development65(1)9-18(2003 May)
Ishiwata H,Katsuma S,Kizaki K,Patel OV,Nakano H,Takahashi T,Imai K,Hirasawa A,Shiojima S,Ikawa H,Suzuki Y,Tsujimoto G,Izaike Y,Todoroki J,Hashizume K


book

A bovine cDNA and a yeast gene (VMA8) encoding the subunit D of the vacuolar H(+)-ATPase.
Proceedings of the National Academy of Sciences of the United States of America92(2)497-501(1995 Jan)
Nelson H,Mandiyan S,Nelson N